Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Hepe04g1898 ATGGGTTCTGGAGACTGGTTTAAGACAGTAATTCGCTTAAAGAAAGTGAAAACCAGCAGTTCAAAACAAGCTAAGGAGAAATCAAATTCTTTGAAATCGAATAAGTTGCAAAAAGATTCCACGAAGTTTAAAAATGGTGGTACTAATGGGAACAGCAAGTCTCTTGGGATGCCGATTGAAGATGTTGCTGCAGTTCGGATTCAGACGGCATATCGAGCATATCGTGCAAGGAAAATTTTACGTCGCTTGAAAGGAGCTGTGAGACTGCAGAATCTGACTCAAACCAATTCTGTTAGAAAGCATGCTACATCTGCATTAGGCCATCTTCATTCATGGAGCAATATACAGGCTCAAATTAGGGCTCGTCGACTTTGTATGGTGACAGAAGGACGACTAAGACAAAAGAGATTAGAGAATCAACGAAAACTTGAGGCTAAGCTTCATGATATAGAGGTGGAGTGGTGTGGCGGTGCAGACACCATGGATGAGGTTCTTTCAAGGATACACGAGAGAGAAGAAGCAGCTGTTAAGCGTGAGCGTGCTATGGCATATGCATTCTCACATCAGTGGAGAGCAAACTCCAGTGAGATGTATGGGTTGGGTAAAGATGAACTTGGTAAAGCTGATTGGGGTTGGAGCTGGAAAGAACGATGGATTGCTGCCCGTCCATGGGAAAGCCGTGTACCATCTCAGTTAGTTAGTCCGAAGAAATCGACTAGTAGGCAATCAAGCAAAGTCAGTAAGAAAAACTCACCATCTCCGAAAGCACGAGTTTTGGTTAAACCTCCTTCCCCAAATGGGAAATCAACTGCAAAGGCTCGGAGGTTATCCTATCCACCAACCGAGAAAACCGAGAAACTGGCCACGGAAGAAAAGAGCGTCAAAAAAAGCGTTAAAGATGATGAAGGAAACACCAAACAAGAAGAAACAGTGTCCTAA 939 43.56 MGSGDWFKTVIRLKKVKTSSSKQAKEKSNSLKSNKLQKDSTKFKNGGTNGNSKSLGMPIEDVAAVRIQTAYRAYRARKILRRLKGAVRLQNLTQTNSVRKHATSALGHLHSWSNIQAQIRARRLCMVTEGRLRQKRLENQRKLEAKLHDIEVEWCGGADTMDEVLSRIHEREEAAVKRERAMAYAFSHQWRANSSEMYGLGKDELGKADWGWSWKERWIAARPWESRVPSQLVSPKKSTSRQSSKVSKKNSPSPKARVLVKPPSPNGKSTAKARRLSYPPTEKTEKLATEEKSVKKSVKDDEGNTKQEETVS 312
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 73905450 73911467 + Hsped.04g18980.1 Hepe04g1898 569036
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Hepe04g1898 312 ProSiteProfiles IQ motif profile. 60 88 - -
Hepe04g1898 312 PANTHER IQ-DOMAIN 5-RELATED 6 274 - -
Hepe04g1898 312 MobiDBLite consensus disorder prediction 40 55 - -
Hepe04g1898 312 MobiDBLite consensus disorder prediction 278 312 - -
Hepe04g1898 312 MobiDBLite consensus disorder prediction 17 55 - -
Hepe04g1898 312 MobiDBLite consensus disorder prediction 229 312 - -
Hepe04g1898 312 MobiDBLite consensus disorder prediction 231 251 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Hepe04g1898 Hepe-Chr4:73905450 Hepe07g0994 Hepe-Chr7:13583939 4.09e-67 dispersed
Hepe04g1898 Hepe-Chr4:73905450 Hepe09g1233 Hepe-Chr9:15956958 1.80e-39 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hepe04g1898 - - - 0.0