Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Hepe04g1932 ATGATGTCCAAATCGTATACAAATCTTTTAGATTTAGCTTCAGGGAATTTTCCCATCATGGGTCGTGAGAAGAAGCGACTTCCACGAGTAATGACTGTTGCCGGGGTAATATCAGAGCTTGATGACGACCAGGCAAATAGTGTCACTTCTGAGGGACCTTCGTCAGTTATTCAAGACCGTATAATTATTGTTGCCAATCAGCTTCCTATTAAAGCTAAGCGTAGACCGGACAATAAAGGCTGGAGTTTTAGTTGGGATGAAGACTCTTTGCTGTGGCAGCTCAAGGATGGTTTACCTGAAGATATGGAGGTTTTGTATGTAGGATCCTTGCGGGTGGATGTTGATTCTTCCGAACAAGATGATGTTTCCCAGCTTTTGTTGGAGAGGTTTAAGTGTGTTCCTGCGTTTTTGCCTCAGGACATTTTATCGAAATTTTATCATGGTTTTTGTAAGCAGCATTTGTGGCCACTCTTTCATTATATGCTACCGTTCTCAGCCACTCATGGTGGTCGGTTTGATCGGTCTCTGTGGGAGGCATATGTAGCAGCAAATAAAATTTTTTCTCAACGTGTGATTGAGGTCATAAACCCAGATGATGACTTTGTATGGATTCATGATTACCATTTAATGGTGCTGCCCACCTTCTTGAGGAGAAGGTTTACAAGATTGAGAATGGGCTTTTTTCTTCACAGTCCATTTCCTTCTTCAGAAATATATAGGACTTTGCCAGTGAGGGAAGAGATTCTTAAGGCACTTTTGAATGCAGACCTTATTGGTTTTCACACTTTTGACTATGCTCGACATTTCCTGTCTTGTTGTAGTCGGATGTTGGGTTTGGAATATCAGTCAAAGAGGGGTTATATTGGGTTGGAATATTTTGGAAGGACTGTGGGGATAAAGATCATGCCTGTTGGAATTCACATGGGCCAGATGGAGTCAGTGTTAAGACTTGCTGATAAAGATTGGAGGGTACAGGAGCTCAAGCGACAGTTTGAAGGAAAAGTTGTCTTACTTGGAGTTGATGATATGGACATTTTTAAAGGGGTCAATCTGAAGTTGTTGGCAATGGAACAATTGCTAAGGCAACATCCAAAGTGGCAGGGAAGAGCTGTTTTCATTCAGATTGCAAACCCAGCTAGAGGAAGAGGGAAAGATCTTGAGGAAATACAAGATGAAATACAGGAATGCTGCGAGAGAATTAATGAAAGTTTTGGACAGCCAAATTATGAGCCAATTGTGTTCATTGATCGACCTGTTTCTCTCACTGAAAGAGCTGCATATTATACTGTTGCCGAATGTGTTGTAGTCACAGCAGTGAGGGATGGTATGAACCTAACTCCTTATGAGTACGTTGTCTGCAGGCAGGGAACCTCTGGATCAGATTATAGCACAGAAACAAATGGACCACAAAAGAGCATGCTAGTCATATCGGAGTTCATGGGATGTTCCCCTTCTCTTAGTGGTGCAATACGGGTTAACCCATGGAACATTGAAGCTACTGCCGAAGCATTGAATGAGGCAATATCAATGGCTGATGCTGAGAAGCAATTGCGTCATGAAAAGCATTACAAATATGTGAGTACACATGATGTGGCATACTGGTCAAAGAGTTTTTTCCAAGATATGGAAAGAACTTGTAAGGATCACTTCAGAAGACGGTGTTGGGGAATTGGGTTGGGCTTTGGTTTCAGAGTTGTAGCACTTGATCCTAACTTTAGAAAGTTGTCTATTGATGCCATTGTGGCTGCATATTCGAGGTCTAAAAGGAGGGCTATACTTTTGGATTATGATGGCACTGTCATGCCACAAGCTTCAATTGATAAGACCCCTAGTCATCAAGTTATTTCAATCATAGATTCACTTTGTGATGATGTTAGGAATACTGTTTTTGTTGTTAGTGGAAGAGGGCGTGAGAGTTTGGGCAACTGGTTTTCTCCTTGCGACAAACTTGGGATTGCTGCGGAGCATGGCTATTTTATGAGGTGGTCTGCTGATAAGGACTGGGAAAATTGTGGTCAAGGTAGTGATTTTGGCTGGATACAGATCGCAGAGCCAGTCATGAAATTATATACAGAAGCTACTGACGGCTCTTCTATTGAAACCAAGGAAAGTGGCTTGGTGTGGCACCACCAGGATGCGGACCCTGATTTTGGTGGCAGCCAGGCCAAGGAACTGTTGGATCACCTTGAAAGTGTGCTGGCAAATGAACCAGTTGCTGTAAAAAGGGGTCAGTCTATTGTAGAAGTGAAACCCCAGGTATTTTCTTCTACTTTGAACTTCTGA 2283 42.44 MMSKSYTNLLDLASGNFPIMGREKKRLPRVMTVAGVISELDDDQANSVTSEGPSSVIQDRIIIVANQLPIKAKRRPDNKGWSFSWDEDSLLWQLKDGLPEDMEVLYVGSLRVDVDSSEQDDVSQLLLERFKCVPAFLPQDILSKFYHGFCKQHLWPLFHYMLPFSATHGGRFDRSLWEAYVAANKIFSQRVIEVINPDDDFVWIHDYHLMVLPTFLRRRFTRLRMGFFLHSPFPSSEIYRTLPVREEILKALLNADLIGFHTFDYARHFLSCCSRMLGLEYQSKRGYIGLEYFGRTVGIKIMPVGIHMGQMESVLRLADKDWRVQELKRQFEGKVVLLGVDDMDIFKGVNLKLLAMEQLLRQHPKWQGRAVFIQIANPARGRGKDLEEIQDEIQECCERINESFGQPNYEPIVFIDRPVSLTERAAYYTVAECVVVTAVRDGMNLTPYEYVVCRQGTSGSDYSTETNGPQKSMLVISEFMGCSPSLSGAIRVNPWNIEATAEALNEAISMADAEKQLRHEKHYKYVSTHDVAYWSKSFFQDMERTCKDHFRRRCWGIGLGFGFRVVALDPNFRKLSIDAIVAAYSRSKRRAILLDYDGTVMPQASIDKTPSHQVISIIDSLCDDVRNTVFVVSGRGRESLGNWFSPCDKLGIAAEHGYFMRWSADKDWENCGQGSDFGWIQIAEPVMKLYTEATDGSSIETKESGLVWHHQDADPDFGGSQAKELLDHLESVLANEPVAVKRGQSIVEVKPQVFSSTLNF 760
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 74256909 74262354 + Hsped.04g19320.1 Hepe04g1932 569070
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Hepe04g1932 760 FunFam alpha,alpha-trehalose-phosphate synthase [UDP-forming] 6 53 312 - -
Hepe04g1932 760 CDD GT20_TPS 60 543 IPR001830 GO:0003824(InterPro)|GO:0005992(InterPro)
Hepe04g1932 760 FunFam Trehalose-6-phosphate synthase 2 673 752 - -
Hepe04g1932 760 Gene3D - 592 672 IPR023214 -
Hepe04g1932 760 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 59 547 - -
Hepe04g1932 760 PANTHER TREHALOSE-6-PHOSPHATE SYNTHASE 24 755 IPR001830 GO:0003824(InterPro)|GO:0004805(PANTHER)|GO:0005829(PANTHER)|GO:0005992(InterPro)|GO:0005992(PANTHER)|GO:0070413(PANTHER)
Hepe04g1932 760 Gene3D Glycogen Phosphorylase B; 50 320 - -
Hepe04g1932 760 Pfam Trehalose-phosphatase 593 754 IPR003337 GO:0005992(InterPro)
Hepe04g1932 760 SUPERFAMILY HAD-like 590 752 IPR036412 -
Hepe04g1932 760 Pfam Glycosyltransferase family 20 60 543 IPR001830 GO:0003824(InterPro)|GO:0005992(InterPro)
Hepe04g1932 760 FunFam alpha,alpha-trehalose-phosphate synthase [UDP-forming] 6 589 706 - -
Hepe04g1932 760 Gene3D Glycogen Phosphorylase B; 321 528 - -
Hepe04g1932 760 FunFam Alpha,alpha-trehalose-phosphate synthase 314 527 - -
Hepe04g1932 760 Gene3D - 673 752 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Hepe04g1932 Hepe-Chr4:74256909 Hepe06g1002 Hepe-Chr6:57866192 0.0 dispersed
Hepe02g0118 Hepe-Chr2:1363625 Hepe04g1932 Hepe-Chr4:74256909 0.0 wgd
Hepe04g1932 Hepe-Chr4:74256909 Hepe08g0558 Hepe-Chr8:4858014 4.74e-275 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hepe04g1932 K16055 - csv:101213082 1480.69