Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Hepe04g1971 | ATGGAGAAAGAGCCTCTTCTTCCGTATATGAGTCCTAGAGGGAAACCGCTTTTTCCTCCTCAATTATTCCCACTCCCTGAAAACGATGAAATTACTCTGCCTATGACGCCCACGGAGTTCAAAGACCGCCTGATCTTTGGCCCTTCGTCGTCCCCGCAAGACGCTTCTCCTATATTTGACGCCTTGACGCTATCTATTTCTACCGCCAGACCCTCTGGTTCATCTTCTCTGCAGGACCCATCTACCCCTTTCGACCCCAAATCCCAATCGCAGTCTCCTATGGCGTGGCTTGTGGATTCCAATTCAGCATGGCCCAAAAGCAACCTCCACCGCTCCAAAACCGCACCTGCCATGGCGGTCATCAACGATGTCACCCATTCGCAGGAGCCCAAGCCACAATTTGGTAAACAGTCTATTATCCGCCAAGCTGTTGTTCTTCTTATTATTTACTTGTCCTTGGGCGTGGTTATCTATTGGATTAATCGTGATAATTTTTCGGCTAACGAGACTCATCCTGTAGTCGATGCATTGTACTTTTGCATTGTGACGATGTGCACAATTGGGTATGGAGATATTACGCCAAATAGCGCGGCGACGAAGCTGTTCTCAGTGTTGTTTGTGTTGGTGGGATTTGGGTTTATTGATATATTGCTCTCTGGAATGGTCAGTTATGTGCTTGATTTGCAGGAGAGTTATTTGTTAAGGAATGTAAAAGGGGGGTTGCAGAAAGAGTCTGGGAAATCTTATATAATTGATGTGAAGAAGGGAAGAATGAGGATTAGAATGAAAGTGGCATTGGCCTTAGGTGTTGTGATACTTTGTATAGGAGTTGGCATGGGTTTTATGCATTTTGTTGAGGACCTGGGTTGGTTGGATTCATTTTATCTTTCGGTCATGTCTGTTACGACGGTTGGATATGGTGATCAGGCATTCAACTCCATGACTGGTCGTATTTTTGCTTCAATCTGGTTGCTTGTATCGACCCTAGCTGTTGCTCGGGCATTTCTTTATTTAGCCGAGGCAAGAGTAGATAAGCGGCATAGGATGATGGCAAAATGGATACTTGGTCAGGATATGACCGTCTCTGAGTTTCTTGCTGCTGATACTGACAACAACGGCTGTGTGAGTAGGTCAGAATATGTGATATTCAAGCTGAAGGAGATGGGTAAGGTATCAGAGAAAGATGTCATGCAGATATCTAATAACTTTGATAGGCTAGACACGGGCAAATGTGGGAAGATTACACTGGCTGATCTCTTGGAAAGTCATCACTGA | 1275 | 45.1 | MEKEPLLPYMSPRGKPLFPPQLFPLPENDEITLPMTPTEFKDRLIFGPSSSPQDASPIFDALTLSISTARPSGSSSLQDPSTPFDPKSQSQSPMAWLVDSNSAWPKSNLHRSKTAPAMAVINDVTHSQEPKPQFGKQSIIRQAVVLLIIYLSLGVVIYWINRDNFSANETHPVVDALYFCIVTMCTIGYGDITPNSAATKLFSVLFVLVGFGFIDILLSGMVSYVLDLQESYLLRNVKGGLQKESGKSYIIDVKKGRMRIRMKVALALGVVILCIGVGMGFMHFVEDLGWLDSFYLSVMSVTTVGYGDQAFNSMTGRIFASIWLLVSTLAVARAFLYLAEARVDKRHRMMAKWILGQDMTVSEFLAADTDNNGCVSRSEYVIFKLKEMGKVSEKDVMQISNNFDRLDTGKCGKITLADLLESHH | 424 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
4 | 74549723 | 74555469 | + | Hsped.04g19710.1 | Hepe04g1971 | 569109 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Hepe04g1971 | 424 | PRINTS | Two pore domain K+ channel signature | 302 | 311 | IPR003280 | GO:0005267(InterPro)|GO:0016020(InterPro)|GO:0071805(InterPro) | |
Hepe04g1971 | 424 | PRINTS | Two pore domain K+ channel signature | 182 | 210 | IPR003280 | GO:0005267(InterPro)|GO:0016020(InterPro)|GO:0071805(InterPro) | |
Hepe04g1971 | 424 | SUPERFAMILY | Voltage-gated potassium channels | 140 | 230 | - | - | |
Hepe04g1971 | 424 | Pfam | Ion channel | 271 | 340 | IPR013099 | - | |
Hepe04g1971 | 424 | Pfam | Ion channel | 146 | 225 | IPR013099 | - | |
Hepe04g1971 | 424 | SUPERFAMILY | EF-hand | 361 | 421 | IPR011992 | - | |
Hepe04g1971 | 424 | FunFam | Two-pore potassium channel 3 | 247 | 361 | - | - | |
Hepe04g1971 | 424 | ProSitePatterns | EF-hand calcium-binding domain. | 368 | 380 | IPR018247 | - | |
Hepe04g1971 | 424 | MobiDBLite | consensus disorder prediction | 70 | 92 | - | - | |
Hepe04g1971 | 424 | Gene3D | - | 269 | 332 | - | - | |
Hepe04g1971 | 424 | Gene3D | - | 136 | 234 | - | - | |
Hepe04g1971 | 424 | Gene3D | - | 333 | 424 | - | - | |
Hepe04g1971 | 424 | PANTHER | POTASSIUM CHANNEL, SUBFAMILY K | 144 | 371 | IPR003280 | GO:0005267(InterPro)|GO:0005887(PANTHER)|GO:0009705(PANTHER)|GO:0015271(PANTHER)|GO:0016020(InterPro)|GO:0022841(PANTHER)|GO:0030322(PANTHER)|GO:0071805(PANTHER)|GO:0071805(InterPro) | |
Hepe04g1971 | 424 | MobiDBLite | consensus disorder prediction | 1 | 30 | - | - | |
Hepe04g1971 | 424 | FunFam | Two-pore potassium channel 5 | 128 | 238 | - | - | |
Hepe04g1971 | 424 | SUPERFAMILY | Voltage-gated potassium channels | 254 | 360 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Hepe04g1971 | Hepe-Chr4:74549723 | Hepe07g1454 | Hepe-Chr7:48599026 | 1.26e-59 | dispersed |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Hepe04g1971 | K05389 | - | csv:101220017 | 762.681 |