Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Hepe04g2057 | ATGTCATGTTCTTACACTTATGGATTTATGCTGTTGGATACAATGTTTTTGGATTGGGGACATCATTGTAGGAAGAAGATAACAGCACCAACGACGACAATGAACGAGGAGGATTTGGAAGACGAGGGAGGCTCGACGCAAATAAAACGACCAGGGGTTATCTATGGATCTCATCTAGTACAAGGCAATAGATCTCATCTAGTACAAGGCAAAATGGGTCATGGGATGGAGGACTATATCGTTGCCGAAGAACGACATGTCGACGACCACAAGCTGGGACTATTTGCAATATTCGATGGCCACTCCCATCGCGATGTTGCAGAGTACTTGCAGAGCAATCTGTTTGATAACATCTTAAGTCAGTCTAGTTTCTGGGAAGACCCTGAAGGAGCAATCAGGAGGGCTTATACAGCAACAGATAAAGAGATTTTGGCTAGAAAACTGAGAAAGAGAGGAGGTTCAACAGCACTCACTGCCATTCTAATCGATGGGCGGAACCTAATCATCGCAAACGTAGGCGACTCGCGAGCGGTGATATGCAGGAATGGCTCGGCAAAACCAATTACAGTCGATCACGAACCAAAGAATGAGAAGGAGCTTGTCGAGAGCCGAGGCGAATTTGTTTTACAAATGTCAGGAAGTGTGCCACGGGTGGATGGTCAGCTAGCAATGTCAAGGGCATTTGGAGATGCAAAGCTCAAAGAATACATTACTTCAGAACCAGATATCAGAATCTTGACAATCGACAATGAGACTGAGTTCACCATTTTGGCCAGTGATGGCCTCTGGAAGGTGATTTCAAACCAGGAGGCTTGTGATTGCATCAGAGAAATGAGTATGGAAGCTCAAAAGGCTTCAGAGGTGTTGATCAAAGAAGCATTGTCTCGAGAGAGCTACTATGACATCTCTTGCATTGTTATTACCTTCCACTGA | 933 | 44.91 | MSCSYTYGFMLLDTMFLDWGHHCRKKITAPTTTMNEEDLEDEGGSTQIKRPGVIYGSHLVQGNRSHLVQGKMGHGMEDYIVAEERHVDDHKLGLFAIFDGHSHRDVAEYLQSNLFDNILSQSSFWEDPEGAIRRAYTATDKEILARKLRKRGGSTALTAILIDGRNLIIANVGDSRAVICRNGSAKPITVDHEPKNEKELVESRGEFVLQMSGSVPRVDGQLAMSRAFGDAKLKEYITSEPDIRILTIDNETEFTILASDGLWKVISNQEACDCIREMSMEAQKASEVLIKEALSRESYYDISCIVITFH | 310 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 4 | 75410809 | 75412135 | - | Hsped.04g20570.1 | Hepe04g2057 | 569195 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Hepe04g2057 | 310 | SUPERFAMILY | PP2C-like | 52 | 310 | IPR036457 | - | |
| Hepe04g2057 | 310 | Gene3D | - | 65 | 310 | IPR036457 | - | |
| Hepe04g2057 | 310 | FunFam | Probable protein phosphatase 2C 39 | 49 | 310 | - | - | |
| Hepe04g2057 | 310 | CDD | PP2Cc | 53 | 309 | IPR001932 | - | |
| Hepe04g2057 | 310 | PANTHER | PROTEIN PHOSPHATASE | 45 | 307 | IPR015655 | GO:0004722(InterPro)|GO:0004722(PANTHER)|GO:0006470(InterPro)|GO:0035970(PANTHER) | |
| Hepe04g2057 | 310 | Pfam | Protein phosphatase 2C | 74 | 298 | IPR001932 | - | |
| Hepe04g2057 | 310 | SMART | PP2C_4 | 44 | 307 | IPR001932 | - | |
| Hepe04g2057 | 310 | ProSiteProfiles | PPM-type phosphatase domain profile. | 62 | 309 | IPR001932 | - |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Hepe04g2057 | Hepe-Chr4:75410809 | Hepe07g0339 | Hepe-Chr7:3402805 | 2.70e-76 | dispersed | |
| Hepe04g2057 | Hepe-Chr4:75410809 | Hepe02g0124 | Hepe-Chr2:1422576 | 3.07e-96 | transposed |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Hepe04g2057 | K14803 | - | csv:101211141 | 429.483 |