Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Hepe04g2057 ATGTCATGTTCTTACACTTATGGATTTATGCTGTTGGATACAATGTTTTTGGATTGGGGACATCATTGTAGGAAGAAGATAACAGCACCAACGACGACAATGAACGAGGAGGATTTGGAAGACGAGGGAGGCTCGACGCAAATAAAACGACCAGGGGTTATCTATGGATCTCATCTAGTACAAGGCAATAGATCTCATCTAGTACAAGGCAAAATGGGTCATGGGATGGAGGACTATATCGTTGCCGAAGAACGACATGTCGACGACCACAAGCTGGGACTATTTGCAATATTCGATGGCCACTCCCATCGCGATGTTGCAGAGTACTTGCAGAGCAATCTGTTTGATAACATCTTAAGTCAGTCTAGTTTCTGGGAAGACCCTGAAGGAGCAATCAGGAGGGCTTATACAGCAACAGATAAAGAGATTTTGGCTAGAAAACTGAGAAAGAGAGGAGGTTCAACAGCACTCACTGCCATTCTAATCGATGGGCGGAACCTAATCATCGCAAACGTAGGCGACTCGCGAGCGGTGATATGCAGGAATGGCTCGGCAAAACCAATTACAGTCGATCACGAACCAAAGAATGAGAAGGAGCTTGTCGAGAGCCGAGGCGAATTTGTTTTACAAATGTCAGGAAGTGTGCCACGGGTGGATGGTCAGCTAGCAATGTCAAGGGCATTTGGAGATGCAAAGCTCAAAGAATACATTACTTCAGAACCAGATATCAGAATCTTGACAATCGACAATGAGACTGAGTTCACCATTTTGGCCAGTGATGGCCTCTGGAAGGTGATTTCAAACCAGGAGGCTTGTGATTGCATCAGAGAAATGAGTATGGAAGCTCAAAAGGCTTCAGAGGTGTTGATCAAAGAAGCATTGTCTCGAGAGAGCTACTATGACATCTCTTGCATTGTTATTACCTTCCACTGA 933 44.91 MSCSYTYGFMLLDTMFLDWGHHCRKKITAPTTTMNEEDLEDEGGSTQIKRPGVIYGSHLVQGNRSHLVQGKMGHGMEDYIVAEERHVDDHKLGLFAIFDGHSHRDVAEYLQSNLFDNILSQSSFWEDPEGAIRRAYTATDKEILARKLRKRGGSTALTAILIDGRNLIIANVGDSRAVICRNGSAKPITVDHEPKNEKELVESRGEFVLQMSGSVPRVDGQLAMSRAFGDAKLKEYITSEPDIRILTIDNETEFTILASDGLWKVISNQEACDCIREMSMEAQKASEVLIKEALSRESYYDISCIVITFH 310
       

Gff information


Chromosome Start End Strand Old_gene Gene Num
4 75410809 75412135 - Hsped.04g20570.1 Hepe04g2057 569195
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Hepe04g2057 310 SUPERFAMILY PP2C-like 52 310 IPR036457 -
Hepe04g2057 310 Gene3D - 65 310 IPR036457 -
Hepe04g2057 310 FunFam Probable protein phosphatase 2C 39 49 310 - -
Hepe04g2057 310 CDD PP2Cc 53 309 IPR001932 -
Hepe04g2057 310 PANTHER PROTEIN PHOSPHATASE 45 307 IPR015655 GO:0004722(InterPro)|GO:0004722(PANTHER)|GO:0006470(InterPro)|GO:0035970(PANTHER)
Hepe04g2057 310 Pfam Protein phosphatase 2C 74 298 IPR001932 -
Hepe04g2057 310 SMART PP2C_4 44 307 IPR001932 -
Hepe04g2057 310 ProSiteProfiles PPM-type phosphatase domain profile. 62 309 IPR001932 -
       

Duplication type information


Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Hepe04g2057 Hepe-Chr4:75410809 Hepe07g0339 Hepe-Chr7:3402805 2.70e-76 dispersed
Hepe04g2057 Hepe-Chr4:75410809 Hepe02g0124 Hepe-Chr2:1422576 3.07e-96 transposed
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hepe04g2057 K14803 - csv:101211141 429.483