Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Hepe04g2070 | ATGTTGTTTGAGATGGAGAATAATTACCAAGAAGGTGATTTGACTGATATTGTGAGAGGAAGAAAAAGCACTTCTTCTTCTAATTATGGTTGCAAAACAGAAGATCAAGAGCAGCAGCAGCAACAACAACAACAACCCTTTTCTTCATCAGAGTGGCAATTTTCATCACAAGTAGTAGCCATGAATAATAATAATTTCTCTTCTTCTTCTTCGTCTTCGGAATTACAAGATCGACGACGACGACAAGCTGCAGCGAGATCATCATCAAGAGAAGAAGAAGATCAATTAGTAGAATACAGTTTTGGGGATCCATTTTGTGCTTCAGCAGCTATGAGAGATCCACTTCTTCTTCATCATCATCAAGAGGATCAGCTGGATGATTTGTTGTATAATAATAATTCTTCTTCAAGTGCTACTTTTTTCAATGGTGGTTGTGGTAATTTAGAGGACAAAAGTGCTTTTGGTGGTGTTGTTAACAACAACAATCAACAAGATGATGTTATCATGATCAAAAGGCCTTCTTCTTGCAATATATTCTCAAGAATGCTTCAGATCTCTCCAGCAACAACAACTTCAATTACAAACAAATTCCCAATTCTTTCAGATCATTCACCTTCTTCTTTGCTAATTCCCAATTCCAATAATAATTCTCCTACTACAAATCATCATCATTTTCTTGACAATAATATTAATAATCCCTCCTCTCTTCAGATCTCTTCTCCTAGGAATCCGCCTGGTATCAAGCGAAGGAAGAGCCAAGCAAGGAAGGTGGTTTGTGTTCCTGCTCCAGTGGCTGCCAGTAGCAGACCAAATGGGGAAGTTATTCCTTCTGATCTCTGGGCTTGGAGGAAATATGGTCAGAAACCTATTAAAGGTTCTCCATATCCTAGGGGGTATTATAGATGCAGCAGCTCAAAGGGTTGTTCAGCCAGAAAACAAGTGGAAAGAAGTAGAACAGATCCAAACATGCTGGTGATTACATACACATCTGAGCACAACCATCCATGGCCAACTCAAAGAAATGCTCTAGCTGGCTCTTCAAGGTCCCAACAATCAAAAAACAACAACACCACACCCAATTCTTCAAAACTCTCAGCTTCCACAAAGCCAACCACATCAACAACTCAAGAAGACAAAATTAAGGAAGATCAAAACAACAACAACAATAATGGAAGAACAAGATCCTCAGCAGCATCAAATAACAATGTTAAGGAAGAGGGTGCTGAAGAGATTGATCAGAAACAGTTTGAAACAGAAGATAATATTGGAGATCATCATCAATTGAGTGAAGAAGGGTTTCAATATAGGGTGGCAATGGCAATGGCAAGCAATAACAACAATCAAAGTGATGATTTTTTTGCAGATTTGGAAGAATTAGAGACCCACCCTTTAAATCTATTGTTCACACAAGGCCAAAAATTAGACCAAATTAGCAAAGGGGGCGGCTTAGACGACCTGGTTGCATTCAATAATCTCTTCAATTGGGGGGCACCTGAAAACAACAACAACAACAACAATTCCAACAATTCATTTGAGGAACCACCAACTGCTAGCAAGAGAGGTTTTTATTAA | 1572 | 38.74 | MLFEMENNYQEGDLTDIVRGRKSTSSSNYGCKTEDQEQQQQQQQQPFSSSEWQFSSQVVAMNNNNFSSSSSSSELQDRRRRQAAARSSSREEEDQLVEYSFGDPFCASAAMRDPLLLHHHQEDQLDDLLYNNNSSSSATFFNGGCGNLEDKSAFGGVVNNNNQQDDVIMIKRPSSCNIFSRMLQISPATTTSITNKFPILSDHSPSSLLIPNSNNNSPTTNHHHFLDNNINNPSSLQISSPRNPPGIKRRKSQARKVVCVPAPVAASSRPNGEVIPSDLWAWRKYGQKPIKGSPYPRGYYRCSSSKGCSARKQVERSRTDPNMLVITYTSEHNHPWPTQRNALAGSSRSQQSKNNNTTPNSSKLSASTKPTTSTTQEDKIKEDQNNNNNNGRTRSSAASNNNVKEEGAEEIDQKQFETEDNIGDHHQLSEEGFQYRVAMAMASNNNNQSDDFFADLEELETHPLNLLFTQGQKLDQISKGGGLDDLVAFNNLFNWGAPENNNNNNNSNNSFEEPPTASKRGFY | 523 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
4 | 75521484 | 75525316 | - | Hsped.04g20700.1 | Hepe04g2070 | 569208 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Hepe04g2070 | 523 | MobiDBLite | consensus disorder prediction | 1 | 95 | - | - | |
Hepe04g2070 | 523 | MobiDBLite | consensus disorder prediction | 208 | 254 | - | - | |
Hepe04g2070 | 523 | MobiDBLite | consensus disorder prediction | 499 | 523 | - | - | |
Hepe04g2070 | 523 | MobiDBLite | consensus disorder prediction | 386 | 403 | - | - | |
Hepe04g2070 | 523 | SMART | WRKY_cls | 276 | 336 | IPR003657 | GO:0003700(InterPro)|GO:0006355(InterPro)|GO:0043565(InterPro) | |
Hepe04g2070 | 523 | MobiDBLite | consensus disorder prediction | 74 | 95 | - | - | |
Hepe04g2070 | 523 | FunFam | probable WRKY transcription factor 14 | 250 | 330 | - | - | |
Hepe04g2070 | 523 | MobiDBLite | consensus disorder prediction | 19 | 73 | - | - | |
Hepe04g2070 | 523 | MobiDBLite | consensus disorder prediction | 499 | 515 | - | - | |
Hepe04g2070 | 523 | PANTHER | WRKY TRANSCRIPTION FACTOR 30-RELATED-RELATED | 13 | 461 | IPR044810 | GO:0000976(PANTHER)|GO:0003700(InterPro)|GO:0003700(PANTHER)|GO:0005634(PANTHER) | |
Hepe04g2070 | 523 | MobiDBLite | consensus disorder prediction | 320 | 374 | - | - | |
Hepe04g2070 | 523 | MobiDBLite | consensus disorder prediction | 293 | 414 | - | - | |
Hepe04g2070 | 523 | Pfam | WRKY DNA -binding domain | 278 | 335 | IPR003657 | GO:0003700(InterPro)|GO:0006355(InterPro)|GO:0043565(InterPro) | |
Hepe04g2070 | 523 | Gene3D | WRKY domain | 250 | 330 | IPR036576 | GO:0003700(InterPro)|GO:0006355(InterPro)|GO:0043565(InterPro) | |
Hepe04g2070 | 523 | MobiDBLite | consensus disorder prediction | 208 | 242 | - | - | |
Hepe04g2070 | 523 | ProSiteProfiles | WRKY domain profile. | 271 | 337 | IPR003657 | GO:0003700(InterPro)|GO:0006355(InterPro)|GO:0043565(InterPro) | |
Hepe04g2070 | 523 | SUPERFAMILY | WRKY DNA-binding domain | 275 | 337 | IPR036576 | GO:0003700(InterPro)|GO:0006355(InterPro)|GO:0043565(InterPro) |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Hepe02g0116 | Hepe-Chr2:1353391 | Hepe04g2070 | Hepe-Chr4:75521484 | 3.93e-33 | dispersed | |
Hepe02g1153 | Hepe-Chr2:14329088 | Hepe04g2070 | Hepe-Chr4:75521484 | 5.10e-28 | dispersed | |
Hepe04g2070 | Hepe-Chr4:75521484 | Hepe07g1659 | Hepe-Chr7:57982642 | 4.27e-66 | dispersed | |
Hepe04g2070 | Hepe-Chr4:75521484 | Hepe06g0728 | Hepe-Chr6:53314997 | 2.62e-34 | transposed |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
55521 | PF03106 | WRKY | 3.10E-25 | CL0274 | Hepe | TF |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Hepe04g2070 | - | - | - | 0.0 |