Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Hepe04g2071 | ATGGATTCAGCAAGGAGTTGGTTTCAGAAGTTCCAATATAAAGTAAGGAAGGAAACTGTAAATGACAATGAGGCTCAAGATGTACCTTCAAGTGCGACGACACAGAAAGTTGAGGTTGCCAAGCAATATATTGAAAACCATTACAAATCTCAAATGAAGTCATTGCAAGATAGGAAGGAGAGACGTTGGGTGTTGGAGAGGAGGCTTGCTGATGCCGATGCTTCTGAGGAAGACCAAATAAACGTGCTTAAATATTTAGAACAGAAGGAGACAGAATACATGCGTCTTCGTAGACATAAAATGGGTGTTGATGACTTCGAACTTTTGACAATTATAGGAAGGGGTGCATTTGGGGAGGTTAGACTTTGTAGAGAAAAAGCCACAGGTCACGTGTATGCGATGAAGAAGCTTAAGAAATCTGAGATGCTTCGCAGGGGCCAGGTGGAACATGTCAAAGCTGAAAGAAATCTTCTAGCAGAGGTTGACAGTGCCTACATTGTGAAGTTATACTGCTCCTTTCAGGATGAAGATTTTTTGTATCTTATAATGCAATATCTTCCTGGAGGTGATGTGATGACCTTGTTAATGCGCAAGGACATTTTGACGGAGGATGAGGCTAGATTTTATGTTGGGGAAACAGTCCTTGCTATAGAGTCCATTCACAAGCATAATTACATTCACAGAGACATCAAGCCTGACAATTTACTGCTTGATCGTTATGGCCACATTAAACTCTCAGATTTTGGGTTGTGTAAACCCTTGGAGTCTAGTAGTTTCCCTAATCTCACTGAGCAAGAAAATGTACTGGGGAAGAATGTCAGATCTTCCACAGAAAATGATAGTCAGTTTAGCGCATCGAAACGGACACAACAAGAACAATTGTTACACTGGCAAAAGAACAGACGGACACTGGCTTACTCAGCTGTTGGAACGCCAGACTATATTGCCCCAGAAGTGTTATTGAGGAAAGGATATGGAATCGAGTGTGACTGGTGGTCCCTCGGCGCAATTATGTATGAAATGCTTGTGGGATTTCCACCTTTCTATTCTGACGATCCAATGTCTACATGTAGAAAGATTATTAACTGGAGAACTCATCTGAGATTCCCAAAAGAAGCAAAACTTTCCATTGAGGCTAAAGATCTTATTTGCAAACTTCTATGCAATGTTGAGCAAAGAATTGGAACCAAAGGAGCTAAAGAAATTAAGGCGCATCCATGGTTTAAAGGTATACAATGGGATAAATTATATCAAATGGAAGCTGTCATCACCCCAGAGATCCATGATGAGTTAGATACCCGAAATTTTGAGAAGTATGAAGAGCTGGGTGTGCCAGGTCAAACTCCATCAAAGTCGGGTCCTTTGAGAAAGCAGAAGCTTTCACCCAAGGATGTGAACTTTGTTGGTTATACATACAAGAATTTCGAAATCGTCAACGAACACCACTTGTCGGGAATTAGTATGTCTCTACTTATTTTCATTGCATTTAACAATTCAGTCCCAAATGAACATGGGGCAGTCCCAGTCCGGACATGTTTGGGAGCTGAGATGAGGAAAAAGCCTAACAAGACCAAGAGACCATCCGTTACGACTCTATTTGCCACAGCGGATTCTTCAGATCAGCAACCTGTTCAAAGAAGTTTTCCGAATCATTTGCCAACTCATCTAGAAGTCTCGGAAAGCCCCGATCCATCACCTCGTTCAACCGGAGGATCACTGCAACAGCAACAGGCGAAGCGTTGGGGAAGATGA | 1752 | 42.01 | MDSARSWFQKFQYKVRKETVNDNEAQDVPSSATTQKVEVAKQYIENHYKSQMKSLQDRKERRWVLERRLADADASEEDQINVLKYLEQKETEYMRLRRHKMGVDDFELLTIIGRGAFGEVRLCREKATGHVYAMKKLKKSEMLRRGQVEHVKAERNLLAEVDSAYIVKLYCSFQDEDFLYLIMQYLPGGDVMTLLMRKDILTEDEARFYVGETVLAIESIHKHNYIHRDIKPDNLLLDRYGHIKLSDFGLCKPLESSSFPNLTEQENVLGKNVRSSTENDSQFSASKRTQQEQLLHWQKNRRTLAYSAVGTPDYIAPEVLLRKGYGIECDWWSLGAIMYEMLVGFPPFYSDDPMSTCRKIINWRTHLRFPKEAKLSIEAKDLICKLLCNVEQRIGTKGAKEIKAHPWFKGIQWDKLYQMEAVITPEIHDELDTRNFEKYEELGVPGQTPSKSGPLRKQKLSPKDVNFVGYTYKNFEIVNEHHLSGISMSLLIFIAFNNSVPNEHGAVPVRTCLGAEMRKKPNKTKRPSVTTLFATADSSDQQPVQRSFPNHLPTHLEVSESPDPSPRSTGGSLQQQQAKRWGR | 583 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
4 | 75535640 | 75544838 | - | Hsped.04g20710.1 | Hepe04g2071 | 569209 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Hepe04g2071 | 583 | Pfam | Protein kinase domain | 302 | 408 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
Hepe04g2071 | 583 | Pfam | Protein kinase domain | 107 | 259 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
Hepe04g2071 | 583 | FunFam | Non-specific serine/threonine protein kinase | 77 | 189 | - | - | |
Hepe04g2071 | 583 | ProSiteProfiles | Protein kinase domain profile. | 106 | 408 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
Hepe04g2071 | 583 | FunFam | Non-specific serine/threonine protein kinase | 190 | 257 | - | - | |
Hepe04g2071 | 583 | SUPERFAMILY | Protein kinase-like (PK-like) | 87 | 454 | IPR011009 | - | |
Hepe04g2071 | 583 | CDD | MobB_NDR_LATS-like | 40 | 101 | - | - | |
Hepe04g2071 | 583 | SMART | pkinase_C_6 | 409 | 474 | IPR000961 | GO:0004674(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
Hepe04g2071 | 583 | ProSitePatterns | Protein kinases ATP-binding region signature. | 112 | 135 | IPR017441 | GO:0005524(InterPro) | |
Hepe04g2071 | 583 | MobiDBLite | consensus disorder prediction | 534 | 554 | - | - | |
Hepe04g2071 | 583 | CDD | STKc_NDR_like | 104 | 473 | - | - | |
Hepe04g2071 | 583 | PANTHER | SERINE/THREONINE-PROTEIN KINASE | 27 | 477 | IPR050236 | GO:0004674(PANTHER)|GO:0018105(PANTHER)|GO:0035556(PANTHER) | |
Hepe04g2071 | 583 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 225 | 237 | IPR008271 | GO:0004672(InterPro)|GO:0006468(InterPro) | |
Hepe04g2071 | 583 | ProSiteProfiles | AGC-kinase C-terminal domain profile. | 409 | 482 | IPR000961 | GO:0004674(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
Hepe04g2071 | 583 | Gene3D | Phosphorylase Kinase; domain 1 | 104 | 437 | - | - | |
Hepe04g2071 | 583 | SMART | serkin_6 | 106 | 408 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
Hepe04g2071 | 583 | MobiDBLite | consensus disorder prediction | 561 | 583 | - | - | |
Hepe04g2071 | 583 | FunFam | Non-specific serine/threonine protein kinase | 307 | 426 | - | - | |
Hepe04g2071 | 583 | Gene3D | Transferase(Phosphotransferase) domain 1 | 190 | 426 | - | - | |
Hepe04g2071 | 583 | MobiDBLite | consensus disorder prediction | 534 | 583 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Hepe03g0290 | Hepe-Chr3:3869954 | Hepe04g2071 | Hepe-Chr4:75535640 | 2.43e-272 | dispersed | |
Hepe03g2097 | Hepe-Chr3:78932258 | Hepe04g2071 | Hepe-Chr4:75535640 | 1.40e-192 | dispersed | |
Hepe04g2071 | Hepe-Chr4:75535640 | Hepe09g0892 | Hepe-Chr9:8937139 | 5.14e-218 | dispersed | |
Hepe04g2071 | Hepe-Chr4:75535640 | Hepe01g1901 | Hepe-Chr1:83849529 | 1.25e-222 | transposed |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
72779 | PF00069 | Pkinase | 4.70E-64 | CL0016 | Hepe | PK |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Hepe04g2071 | K08790 | - | csv:101208438 | 1023.08 |