Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Hepe04g2071 ATGGATTCAGCAAGGAGTTGGTTTCAGAAGTTCCAATATAAAGTAAGGAAGGAAACTGTAAATGACAATGAGGCTCAAGATGTACCTTCAAGTGCGACGACACAGAAAGTTGAGGTTGCCAAGCAATATATTGAAAACCATTACAAATCTCAAATGAAGTCATTGCAAGATAGGAAGGAGAGACGTTGGGTGTTGGAGAGGAGGCTTGCTGATGCCGATGCTTCTGAGGAAGACCAAATAAACGTGCTTAAATATTTAGAACAGAAGGAGACAGAATACATGCGTCTTCGTAGACATAAAATGGGTGTTGATGACTTCGAACTTTTGACAATTATAGGAAGGGGTGCATTTGGGGAGGTTAGACTTTGTAGAGAAAAAGCCACAGGTCACGTGTATGCGATGAAGAAGCTTAAGAAATCTGAGATGCTTCGCAGGGGCCAGGTGGAACATGTCAAAGCTGAAAGAAATCTTCTAGCAGAGGTTGACAGTGCCTACATTGTGAAGTTATACTGCTCCTTTCAGGATGAAGATTTTTTGTATCTTATAATGCAATATCTTCCTGGAGGTGATGTGATGACCTTGTTAATGCGCAAGGACATTTTGACGGAGGATGAGGCTAGATTTTATGTTGGGGAAACAGTCCTTGCTATAGAGTCCATTCACAAGCATAATTACATTCACAGAGACATCAAGCCTGACAATTTACTGCTTGATCGTTATGGCCACATTAAACTCTCAGATTTTGGGTTGTGTAAACCCTTGGAGTCTAGTAGTTTCCCTAATCTCACTGAGCAAGAAAATGTACTGGGGAAGAATGTCAGATCTTCCACAGAAAATGATAGTCAGTTTAGCGCATCGAAACGGACACAACAAGAACAATTGTTACACTGGCAAAAGAACAGACGGACACTGGCTTACTCAGCTGTTGGAACGCCAGACTATATTGCCCCAGAAGTGTTATTGAGGAAAGGATATGGAATCGAGTGTGACTGGTGGTCCCTCGGCGCAATTATGTATGAAATGCTTGTGGGATTTCCACCTTTCTATTCTGACGATCCAATGTCTACATGTAGAAAGATTATTAACTGGAGAACTCATCTGAGATTCCCAAAAGAAGCAAAACTTTCCATTGAGGCTAAAGATCTTATTTGCAAACTTCTATGCAATGTTGAGCAAAGAATTGGAACCAAAGGAGCTAAAGAAATTAAGGCGCATCCATGGTTTAAAGGTATACAATGGGATAAATTATATCAAATGGAAGCTGTCATCACCCCAGAGATCCATGATGAGTTAGATACCCGAAATTTTGAGAAGTATGAAGAGCTGGGTGTGCCAGGTCAAACTCCATCAAAGTCGGGTCCTTTGAGAAAGCAGAAGCTTTCACCCAAGGATGTGAACTTTGTTGGTTATACATACAAGAATTTCGAAATCGTCAACGAACACCACTTGTCGGGAATTAGTATGTCTCTACTTATTTTCATTGCATTTAACAATTCAGTCCCAAATGAACATGGGGCAGTCCCAGTCCGGACATGTTTGGGAGCTGAGATGAGGAAAAAGCCTAACAAGACCAAGAGACCATCCGTTACGACTCTATTTGCCACAGCGGATTCTTCAGATCAGCAACCTGTTCAAAGAAGTTTTCCGAATCATTTGCCAACTCATCTAGAAGTCTCGGAAAGCCCCGATCCATCACCTCGTTCAACCGGAGGATCACTGCAACAGCAACAGGCGAAGCGTTGGGGAAGATGA 1752 42.01 MDSARSWFQKFQYKVRKETVNDNEAQDVPSSATTQKVEVAKQYIENHYKSQMKSLQDRKERRWVLERRLADADASEEDQINVLKYLEQKETEYMRLRRHKMGVDDFELLTIIGRGAFGEVRLCREKATGHVYAMKKLKKSEMLRRGQVEHVKAERNLLAEVDSAYIVKLYCSFQDEDFLYLIMQYLPGGDVMTLLMRKDILTEDEARFYVGETVLAIESIHKHNYIHRDIKPDNLLLDRYGHIKLSDFGLCKPLESSSFPNLTEQENVLGKNVRSSTENDSQFSASKRTQQEQLLHWQKNRRTLAYSAVGTPDYIAPEVLLRKGYGIECDWWSLGAIMYEMLVGFPPFYSDDPMSTCRKIINWRTHLRFPKEAKLSIEAKDLICKLLCNVEQRIGTKGAKEIKAHPWFKGIQWDKLYQMEAVITPEIHDELDTRNFEKYEELGVPGQTPSKSGPLRKQKLSPKDVNFVGYTYKNFEIVNEHHLSGISMSLLIFIAFNNSVPNEHGAVPVRTCLGAEMRKKPNKTKRPSVTTLFATADSSDQQPVQRSFPNHLPTHLEVSESPDPSPRSTGGSLQQQQAKRWGR 583
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 75535640 75544838 - Hsped.04g20710.1 Hepe04g2071 569209
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Hepe04g2071 583 Pfam Protein kinase domain 302 408 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Hepe04g2071 583 Pfam Protein kinase domain 107 259 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Hepe04g2071 583 FunFam Non-specific serine/threonine protein kinase 77 189 - -
Hepe04g2071 583 ProSiteProfiles Protein kinase domain profile. 106 408 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Hepe04g2071 583 FunFam Non-specific serine/threonine protein kinase 190 257 - -
Hepe04g2071 583 SUPERFAMILY Protein kinase-like (PK-like) 87 454 IPR011009 -
Hepe04g2071 583 CDD MobB_NDR_LATS-like 40 101 - -
Hepe04g2071 583 SMART pkinase_C_6 409 474 IPR000961 GO:0004674(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Hepe04g2071 583 ProSitePatterns Protein kinases ATP-binding region signature. 112 135 IPR017441 GO:0005524(InterPro)
Hepe04g2071 583 MobiDBLite consensus disorder prediction 534 554 - -
Hepe04g2071 583 CDD STKc_NDR_like 104 473 - -
Hepe04g2071 583 PANTHER SERINE/THREONINE-PROTEIN KINASE 27 477 IPR050236 GO:0004674(PANTHER)|GO:0018105(PANTHER)|GO:0035556(PANTHER)
Hepe04g2071 583 ProSitePatterns Serine/Threonine protein kinases active-site signature. 225 237 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Hepe04g2071 583 ProSiteProfiles AGC-kinase C-terminal domain profile. 409 482 IPR000961 GO:0004674(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Hepe04g2071 583 Gene3D Phosphorylase Kinase; domain 1 104 437 - -
Hepe04g2071 583 SMART serkin_6 106 408 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Hepe04g2071 583 MobiDBLite consensus disorder prediction 561 583 - -
Hepe04g2071 583 FunFam Non-specific serine/threonine protein kinase 307 426 - -
Hepe04g2071 583 Gene3D Transferase(Phosphotransferase) domain 1 190 426 - -
Hepe04g2071 583 MobiDBLite consensus disorder prediction 534 583 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Hepe03g0290 Hepe-Chr3:3869954 Hepe04g2071 Hepe-Chr4:75535640 2.43e-272 dispersed
Hepe03g2097 Hepe-Chr3:78932258 Hepe04g2071 Hepe-Chr4:75535640 1.40e-192 dispersed
Hepe04g2071 Hepe-Chr4:75535640 Hepe09g0892 Hepe-Chr9:8937139 5.14e-218 dispersed
Hepe04g2071 Hepe-Chr4:75535640 Hepe01g1901 Hepe-Chr1:83849529 1.25e-222 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
72779 PF00069 Pkinase 4.70E-64 CL0016 Hepe PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hepe04g2071 K08790 - csv:101208438 1023.08