Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Hepe04g2085 ATGGGGAAGAAGAAGAAGAGGGTTTCGTCTAAGGTATGGTGCTACTATTGCGACAGAGAATTCGACGACGAGAAGATTTTGGTGCAGCATCAGAAGGCCAAACACTTCAAGTGCCATGTCTGTCACAAGAAGCTTTCTACTGCTGGTGGTATGGTCATCCACGTTCTTCAGGTTCACAAAGAGTCAGTCACCAAAGTTCCTAATGCAAAATCAGGCAGAGAATCAACAGATATCGAAATATATGGAATGCAAGGAATTCCACCTGATGTCTTGGCCGCACACTATGGAGAGGACGATGAAGAGTCCATATCGAAGGTGGCCAAAGTGGAGATGCCATCAACTCAGATGGTTGGAGGTGTGGTGCCCGGATCGCTGGGTCTTGTATACCCTCCTCAACTAGGTTTGACTGCAATGCGACCTATTTATGCTTCGGCTGGACACGCGCAGCCTACAGGTTGGCCAGTTCCACCTCGTCCCCAACCTTGGTTCCCCCCAAATTCAGCCATTTCAATTCCTCATCCTGCCTCACTGGGCTATGCTCAGCAGCCACTATTTCCTGTGCAGACTGCAAGGCCCCCACTCCCAGTATCATCAACTCCTATGCTCCAGCCTTCACAAATAACGCCACCTGGATTGCCTTCAACTACACCTTCAGTTTCTGTATCTCAACCGTTGTTCCCTGTTGTTAGTAATAGCCATGGACCTACCCAAAGCTCTCCTTATCCTTCATCTACGCTTTCAACAAGCATGCCTTTGACGTCGGCAGCAGAAATCAAGGGCTCAGTGAGTGCACATATGGGCACCAACTCCTTTTCTACAATTGGCAATCAAGTTCCAAGCATTCCAGGTGGAATATTAAGCAATTCTCACTCTTATGCCTCGGGACCAAATACTGGCGGTCCTTCTATTGGACCACCTCCTGTAATTGCGAATAAGGCTCCTACTCAGCCATCAACAAATGAAGTATATTTGGTATGGGATGATGAGGCGATGTCTATGGAGGAAAGAAGAATGTCTTTAACTAAGTATCAGGTGCATGATGAAACTAGCCAGGTAAGTTATACTACAACTTAA 1074 47.11 MGKKKKRVSSKVWCYYCDREFDDEKILVQHQKAKHFKCHVCHKKLSTAGGMVIHVLQVHKESVTKVPNAKSGRESTDIEIYGMQGIPPDVLAAHYGEDDEESISKVAKVEMPSTQMVGGVVPGSLGLVYPPQLGLTAMRPIYASAGHAQPTGWPVPPRPQPWFPPNSAISIPHPASLGYAQQPLFPVQTARPPLPVSSTPMLQPSQITPPGLPSTTPSVSVSQPLFPVVSNSHGPTQSSPYPSSTLSTSMPLTSAAEIKGSVSAHMGTNSFSTIGNQVPSIPGGILSNSHSYASGPNTGGPSIGPPPVIANKAPTQPSTNEVYLVWDDEAMSMEERRMSLTKYQVHDETSQVSYTTT 357
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 75691368 75696656 - Hsped.04g20850.1 Hepe04g2085 569223
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Hepe04g2085 357 MobiDBLite consensus disorder prediction 289 309 - -
Hepe04g2085 357 Gene3D Classic Zinc Finger 1 66 - -
Hepe04g2085 357 CDD SUF4-like 13 92 - -
Hepe04g2085 357 PANTHER ZINC FINGER PROTEIN 207 1 353 - GO:0003677(PANTHER)|GO:0005634(PANTHER)|GO:0006355(PANTHER)
Hepe04g2085 357 SMART c2h2final6 12 35 IPR013087 -
Hepe04g2085 357 SMART c2h2final6 36 59 IPR013087 -
Hepe04g2085 357 ProSitePatterns Zinc finger C2H2 type domain signature. 14 35 IPR013087 -
Hepe04g2085 357 ProSiteProfiles Zinc finger BED-type profile. 7 66 IPR003656 GO:0003677(InterPro)
Hepe04g2085 357 ProSitePatterns Zinc finger C2H2 type domain signature. 38 59 IPR013087 -
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
55523 None None None None Hepe TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hepe04g2085 K27810 - csv:101206973 606.29