Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Hepe04g2123 ATGGGCAAGTGCAGGCTGAACCCAAGCCCAGAACACGTTGCTTTTGGCGGGAAAAAGCGACATTTGGGCGCCAAAAGTGCAAACCCAAACCTCTACCTTCATTCTTCACTCACAATCCTTGAATCCCCCAGAGCGTCACACAACCAAACCAAAGATATGGAGAGCCATGGAGCCGGCAGTTATTTCGTGGATGAGAAGGCCGTTCTCGTCGAGAACATTTTCTTCGAATTCCTCAAGAGTTTTCGCCTCAATGGGAACTCTGGAGACCCTTACTACGAGGCAGAGATTGAAGCTATGATGGCTGGCGAATCTAACACCATGTTTATTGATTTCGCTCACCTCATGCACTCCAATGATCTTCTTCACATAGCAATCGCCGATGAATATCTGAGGTTTGAACCATACCTCAAGAACGCTTGTAAGCGAATCGTAATGGAGCAGAATCCCTCTTTCATCGCTGACGATAACCCCTTCAAGGACATAAATGTCGCTTTCTTCAACATTCCTGTCTCTAAAAGGTTGAGAGAGTTGACTACTGCAGAAATTGGGAAATTAGTATCTGTGACAGGAGTGGTGACGCGGACAAGCGAGAGGGTGCGAATGCAAGAGACTTCTAAGGAGATACCGGCTGGCTCTCTTCCACGATCTTTGGATGTTATTCTTCGCCATGAGATGGTCGAACGTGCCAGGGCTGGAGACACGGTCATCTTCACGGGTACAGTAGTTGTTGTACCAGATATATTAGCATTAGCCTCTCCAGGAGAAAGAGCAGAATGTCGACGAGAAGCTTCAGAGCGAAGTAACTTTGCGGTTGGACACGAAGGAATGAGGGGGCTACGAGCACTAGGAGCGAGGGACTTGTCCTATCGCCTAGCCTTTATTGCCAATTCAGTTCAGGTTTTAGATGGCAGAAGGGATTTTGATATCAGAAACAGGAAAAAGGATGCGGATGAAGATAACCAACAGTTTACCACTGGAGAGCTTGAGGAAGTTCAAAGAATGAGGAATACACCTGACTTCTTCAACAGACTTATTGATAGAATTGCACCAGCAGTCTTTGGCCATCAAGATATCAAGCGAGCAATCCTGTTGATGCTGTTAGGTGGCGTCCACAAGTTAACTCATGAAGGCATTAACCTTCGAGGTGACATCAATGTTTGTATAGTAGGAGATCCAAGCTGTGCAAAATCTCAGTTTCTTAAGTATACTTCAGGTATTGTGCCAAGATCAGTTTACACATCTGGAAAATCCTCTTCTGCTGCTGGATTGACTGCAACTGTAGCCAAAGAACCAGAAATTGGAGAGTTTTGTATTGAGGCTGGTGCCTTAATGCTTGCTGACAATGGCATTTGCTGTATTGATGAATTTGACAAAATGGACGTCAGGGATCAGGTAACTCTCATATTATTTGCCTATCTCATTAATTTGCTTTTGTTCTTGTTACAGTATAATGTTGCTCTGCCTCCTGCTATTCTCTCAAGGTTCGACCTCGTGTACGTGATGATAGATGACCCAGATGATCAAACAGATTACCACATTGCACACCACATTGTCAGAGTACATCAGAAGCATGAGGATGCTCTTTCTCCTGCATTTACTACTGCCGAGTTGAAACGTTATATTGCTTATGCAAAAACTCTAAAACCAAAGGTATTGGTAGACTCTTATGTTGCTCTTCGGAGAGGAGATACAACTCCTGGAAGTAGGGTTGCCTATCGCATGACTGTCAGGCAGCTTGAGGCATTAGTAAGGCTGTCAGAAGCAATTGCACGTAGTTATTTGGAGACTCTGGTTCAATCGCGCCATGTGCGTTTAGCAGTGACATTACTGAAAACGTCAATAATCAGTGTGGAATCTAGCGAGATTGACCTATCTGAATTTCAAGAAGAAACTAATGGCGTTGGAGACGGTAATAATAATGTCGACAATGGACCAAATGAGGTTGATGCTGAACCTAGGAGTGGTGCACCAGATCCACCAACTTCTGGAAATGGTGAAATGGGTTCAGATTCTGGAAGTAAACACGAGGAGAAGAAACTTACCCTGAGTTATGAATATTTTCAGAGGGTTACCCAAGCCCTTGTCATGCGCCTCAGACAGCACGAAGAATTAGTGATGCAAGAAGGAAATGAGCTGGCAGGAGTGAGGCAGAGAGACTTAATTGAATGGTATGTGAATCAACAGAACGAGAGAAATAGCTATAGCTCCGTGGAAGAGGTAGAAAATGAAGTAAAATTAATTAGAGCTATTATCCAGAGTTTGATACGAAAGGAAGGGCATTTGATAGTGGTAGATGGCGGGAGGGCGGTAGGTGGCGAGGCTGAAGGCGAACCATCTTCGTTAAACAGGAATAACAGGATTTTAGCTGTGGCTCCTAATTATGTGGTTGATTAG 2394 44.44 MGKCRLNPSPEHVAFGGKKRHLGAKSANPNLYLHSSLTILESPRASHNQTKDMESHGAGSYFVDEKAVLVENIFFEFLKSFRLNGNSGDPYYEAEIEAMMAGESNTMFIDFAHLMHSNDLLHIAIADEYLRFEPYLKNACKRIVMEQNPSFIADDNPFKDINVAFFNIPVSKRLRELTTAEIGKLVSVTGVVTRTSERVRMQETSKEIPAGSLPRSLDVILRHEMVERARAGDTVIFTGTVVVVPDILALASPGERAECRREASERSNFAVGHEGMRGLRALGARDLSYRLAFIANSVQVLDGRRDFDIRNRKKDADEDNQQFTTGELEEVQRMRNTPDFFNRLIDRIAPAVFGHQDIKRAILLMLLGGVHKLTHEGINLRGDINVCIVGDPSCAKSQFLKYTSGIVPRSVYTSGKSSSAAGLTATVAKEPEIGEFCIEAGALMLADNGICCIDEFDKMDVRDQVTLILFAYLINLLLFLLQYNVALPPAILSRFDLVYVMIDDPDDQTDYHIAHHIVRVHQKHEDALSPAFTTAELKRYIAYAKTLKPKVLVDSYVALRRGDTTPGSRVAYRMTVRQLEALVRLSEAIARSYLETLVQSRHVRLAVTLLKTSIISVESSEIDLSEFQEETNGVGDGNNNVDNGPNEVDAEPRSGAPDPPTSGNGEMGSDSGSKHEEKKLTLSYEYFQRVTQALVMRLRQHEELVMQEGNELAGVRQRDLIEWYVNQQNERNSYSSVEEVENEVKLIRAIIQSLIRKEGHLIVVDGGRAVGGEAEGEPSSLNRNNRILAVAPNYVVD 797
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 76012746 76021615 + Hsped.04g21230.1 Hepe04g2123 569261
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Hepe04g2123 797 ProSitePatterns MCM family signature. 449 457 IPR018525 GO:0003677(InterPro)|GO:0005524(InterPro)|GO:0006260(InterPro)
Hepe04g2123 797 Pfam MCM N-terminal domain 73 167 IPR027925 -
Hepe04g2123 797 Gene3D - 318 469 IPR027417 -
Hepe04g2123 797 MobiDBLite consensus disorder prediction 630 676 - -
Hepe04g2123 797 Pfam MCM OB domain 198 244 IPR033762 -
Hepe04g2123 797 Pfam MCM P-loop domain 328 467 IPR001208 GO:0003677(InterPro)|GO:0005524(InterPro)|GO:0032508(InterPro)
Hepe04g2123 797 Pfam MCM P-loop domain 482 521 IPR001208 GO:0003677(InterPro)|GO:0005524(InterPro)|GO:0032508(InterPro)
Hepe04g2123 797 SUPERFAMILY Nucleic acid-binding proteins 74 246 IPR012340 -
Hepe04g2123 797 PRINTS Mini-chromosome maintenance (MCM) protein family signature 441 455 IPR001208 GO:0003677(InterPro)|GO:0005524(InterPro)|GO:0032508(InterPro)
Hepe04g2123 797 PRINTS Mini-chromosome maintenance (MCM) protein family signature 381 396 IPR001208 GO:0003677(InterPro)|GO:0005524(InterPro)|GO:0032508(InterPro)
Hepe04g2123 797 MobiDBLite consensus disorder prediction 631 645 - -
Hepe04g2123 797 Gene3D - 171 266 IPR012340 -
Hepe04g2123 797 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 350 615 IPR027417 -
Hepe04g2123 797 Pfam MCM AAA-lid domain 536 614 IPR041562 -
Hepe04g2123 797 PANTHER DNA REPLICATION LICENSING FACTOR MCM FAMILY MEMBER 68 197 IPR031327 GO:0000727(PANTHER)|GO:0003677(InterPro)|GO:0003697(PANTHER)|GO:0005524(InterPro)|GO:0005634(PANTHER)|GO:0006268(PANTHER)|GO:0017116(PANTHER)|GO:0032508(InterPro)|GO:0042555(PANTHER)|GO:1902969(PANTHER)|GO:1990518(PANTHER)
Hepe04g2123 797 SMART mcm 170 615 IPR031327 GO:0003677(InterPro)|GO:0005524(InterPro)|GO:0032508(InterPro)
Hepe04g2123 797 ProSiteProfiles MCM family domain profile. 340 517 IPR001208 GO:0003677(InterPro)|GO:0005524(InterPro)|GO:0032508(InterPro)
Hepe04g2123 797 Gene3D - 676 797 - -
Hepe04g2123 797 Pfam MCM6 C-terminal winged-helix domain 678 795 IPR041024 -
Hepe04g2123 797 Gene3D - 62 170 - -
Hepe04g2123 797 Coils Coil 737 757 - -
Hepe04g2123 797 Gene3D - 480 619 IPR027417 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Hepe04g2123 Hepe-Chr4:76012746 Hepe07g2577 Hepe-Chr7:70269433 0.0 dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hepe04g2123 K02542 - cit:102615859 1028.08