Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Hepe04g2125 ATGAAGACCTCTCCTCTAACACTTGTGCTTATGATTATGCTTATGCCTATGCTTCATTCTCCTCCTTGTGTGTTATCCTCCCACTCCGATCTCAAGCTGAAGCTGAAGGCACAAGCTTCTCTTCTGCTTTCCATCAAACACTCTTTTGACCATCATCAACCCACCACCTTTCTCCCCGACTGGAATCCTTCAAATTACTCCTCCCTCTGCTCCTGGACTGGTATTCAATGCCACTTCAATTCAGTTGTTCTCTCCCTCGACATTTCCAATTCCAACATCTCCGCTACCTTCCCGGCCCCTCTTCTTCACAACCTCTCCAACCTTCGCTTCCTCAACATTTCCAACAATCAGTTCACCGGACCACTCAACATTTCCCGTCATTATTGCTCTCACTTGCAGCTCTTTGATGCTTATAACAACAACTTCAATGGCTCTCTCCCCACTCAACTTCCCACTACTCTAAACCACCTCAATCTTGCCGGGAATTACTTCACCGGTCCAATCCCTCCAACCTATTCTCACTTGCCTCACCTCACTTACCTCTCCCTCGCCGGCAATGACTTGGGCGGTCCCATTCCCACTCACCTCGCCAATCTCACCAATCTCCGCCACCTTTATTTGGGTTACTTCAATGAGTTCGACGGTGGTATACCTTCTCAGCTCGGACAACTTGTGAATTTGATTCATCTGGACCTTGCCAGTTGTGGTTTACAAGGTCCAATCCCACCCGAGTTGGGGAACCTCCACAATTTAGACACTCTCTTCTTGCAGACAAATCAGCTCACCGGCTCCATCCCTCCCCAGTTGGCCAACTTGAGCCGCTTGATCTCGCTTGACCTTTCCAACAACCAATTGACTGGAGAGATCCCGGTTGAATTTGCAAACCTCCGCCGGCTTTCGCTCTTCAACTTATTCATCAACAACTTCCACGGGGAGATTCCTCCTGTTCTAGCCGATCTTCCCAGGTTGGAGGTTCTGAAGCTGTGGCAAAATAACTTCACTGGACCCATTCCATGGAAGCTTGGGGAGAATGGGAGACTGACGGAGCTCGACTTGTCCAGCAACAAGCTCACCGGACTGGTCCCGGAGGGCCTGTGCTCCGGAGGAAGCCTGAAGATATTGATTCTACTCAACAATTTTCTGTTTGGGGGTGTCCCACGTGATCTAGGGAGATGCCAGACGCTTGTAAGAGTTCGGATGGGTCAGAATTATTTGAGTGGATCAATCCCGGAGGGTCTGCTTTACTTGCCGAACCTCTCCCTCATGGAACTGCAGAACAACTACCTGAGCGGACCCCTACCTTTAGCTCAGCGGACCCCTACCAAACTCGGCCAGCTTAACCTGTCCAACAATCGCTTCTCTGGATCCCTTCCCTACTCCATCGGAAACTTCACAAGCCTCCAGATTCTGCTTTTGAGCGGAAACCATTTCTCAGGGGACATTCCTCCTCAAATAGGCAAACTGCGAAATCTTCTAAAGCTAGACATCAGCAGAAACAAGTTATCCGGTAGAATCCCTCCCGAGTTGGGTAATTGCGCGTCCCTCACTTACCTGGATTTGAGCCTGAATAAGCTAACCTCTCCAATCCCAGTTCAAATCTCAGAAATTCGAATATTAAATTATCTAAACCTGTCTTGGAACCAACTCAACCAGAGCCTTCCCAAGGAAATTGGGTCCATAAAGAGCTTGACATGTGCGGACTTCTCCCATAATAACCTGTCTGGCCCAATACCCGAAACAGGGCAGTTTTTACTGTTCAATTCCACATCCTTCGAGGGAAATCCCCAACTCAACTGCAACGTGAACGAGTCAGCAACAAGTTCCAACAAGAAGAGAGATTTTGTTGGGGGGAAATATAAGCTTGTGTTTGCGTTGGGACTATTGATGTGTTCGGTAATATTTGCAGCTCTGGCAATCTTCCAGACGAGGAACTTGGCGAAGAAGAAGAAGAATAAGAAATCAAGTTCGTGGAAGGTGGCAGCATTCCAGAAGGTGGAGTTTGGAAGCAAGGACATCGTAGAGTGCGTAAAAGAGAACAACATAATTGGAAAGGGTGGAGCTGGGATTGTGTACAAAGGAATCATGGCAAGTGGTGAAGAAGTAGCGATAAAAAAGTTGTTGGGCATAAAGAAGGGGTCATCACACGACAACGGTCTGTCGGCGGAGATACAGACGCTGGGGAAAATCAGGCATAGGAACATCGTGAGATTGCTTGCATTTTGCACGAATAAGGAGACGAATCTGTTGGTATACGAATACATGGGTAATGGAAGTTTAGGAGAAGTACTCCATGGGAAAAGGGGTTGTTGTCTAAAATGGGGAAGCAGAGTGAAGATAGCCATAGAAGCGGCCAAAGGGCTATGTTATTTGCACCATGACTGTTCGCCGCTCATAATTCATAGGGATGTAAAGTCCAACAACATTTTGCTAAACTCGGATTTGGAGGCTCATGTAGCGGATTTCGGGTTAGCCAAGTTCATGCTGCAAGACAATAATGGAACATCAGAGTGCATGTCTGCAATTGCCGGTTCTTACGGCTATATTGCTCCAGAATATGCATACACATTAAAAGTGGATGAAAAAAGTGATGTATACAGTTTTGGGGTGGTACTGCTGGAGCTGATAACGGGGCGGAAACCAGTAGGCAATTTTGGGGAAGATGGCTTGGATCTTGTCCAATGGACAAAGATCCAAACAAACTCCACCAAAGAAGGAGTTGTTAAGGTATTGGATCAAAGGTTAAGTAACATACCAATAAATGAAGCAAAGCAGATGTATTTTGTTGCAATGTTGTGTGTTCAAGAACACAGCGTGGAACGGCCAACAATGAGAGAAGTGGTTCAAATGCTTGCACAGGCCCAGCAACCTAATACCTTCCACATGCATTGA 2889 47.04 MKTSPLTLVLMIMLMPMLHSPPCVLSSHSDLKLKLKAQASLLLSIKHSFDHHQPTTFLPDWNPSNYSSLCSWTGIQCHFNSVVLSLDISNSNISATFPAPLLHNLSNLRFLNISNNQFTGPLNISRHYCSHLQLFDAYNNNFNGSLPTQLPTTLNHLNLAGNYFTGPIPPTYSHLPHLTYLSLAGNDLGGPIPTHLANLTNLRHLYLGYFNEFDGGIPSQLGQLVNLIHLDLASCGLQGPIPPELGNLHNLDTLFLQTNQLTGSIPPQLANLSRLISLDLSNNQLTGEIPVEFANLRRLSLFNLFINNFHGEIPPVLADLPRLEVLKLWQNNFTGPIPWKLGENGRLTELDLSSNKLTGLVPEGLCSGGSLKILILLNNFLFGGVPRDLGRCQTLVRVRMGQNYLSGSIPEGLLYLPNLSLMELQNNYLSGPLPLAQRTPTKLGQLNLSNNRFSGSLPYSIGNFTSLQILLLSGNHFSGDIPPQIGKLRNLLKLDISRNKLSGRIPPELGNCASLTYLDLSLNKLTSPIPVQISEIRILNYLNLSWNQLNQSLPKEIGSIKSLTCADFSHNNLSGPIPETGQFLLFNSTSFEGNPQLNCNVNESATSSNKKRDFVGGKYKLVFALGLLMCSVIFAALAIFQTRNLAKKKKNKKSSSWKVAAFQKVEFGSKDIVECVKENNIIGKGGAGIVYKGIMASGEEVAIKKLLGIKKGSSHDNGLSAEIQTLGKIRHRNIVRLLAFCTNKETNLLVYEYMGNGSLGEVLHGKRGCCLKWGSRVKIAIEAAKGLCYLHHDCSPLIIHRDVKSNNILLNSDLEAHVADFGLAKFMLQDNNGTSECMSAIAGSYGYIAPEYAYTLKVDEKSDVYSFGVVLLELITGRKPVGNFGEDGLDLVQWTKIQTNSTKEGVVKVLDQRLSNIPINEAKQMYFVAMLCVQEHSVERPTMREVVQMLAQAQQPNTFHMH 962
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 76043627 76047368 - Hsped.04g21250.1 Hepe04g2125 569263
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Hepe04g2125 962 SUPERFAMILY L domain-like 68 436 - -
Hepe04g2125 962 ProSiteProfiles Protein kinase domain profile. 676 962 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Hepe04g2125 962 Gene3D Transferase(Phosphotransferase) domain 1 754 961 - -
Hepe04g2125 962 Pfam Leucine rich repeat N-terminal domain 37 77 IPR013210 -
Hepe04g2125 962 Gene3D Ribonuclease Inhibitor 295 608 IPR032675 -
Hepe04g2125 962 FunFam Leucine-rich repeat receptor-like serine/threonine-protein kinase BAM3 212 317 - -
Hepe04g2125 962 Gene3D Phosphorylase Kinase; domain 1 639 753 - -
Hepe04g2125 962 FunFam Leucine-rich repeat receptor-like serine/threonine-protein kinase 754 962 - -
Hepe04g2125 962 PRINTS Leucine-rich repeat signature 488 501 - -
Hepe04g2125 962 PRINTS Leucine-rich repeat signature 347 360 - -
Hepe04g2125 962 Pfam Leucine Rich Repeat 177 199 IPR001611 GO:0005515(InterPro)
Hepe04g2125 962 Pfam Leucine Rich Repeat 514 534 IPR001611 GO:0005515(InterPro)
Hepe04g2125 962 Pfam Leucine Rich Repeat 226 248 IPR001611 GO:0005515(InterPro)
Hepe04g2125 962 Pfam Leucine Rich Repeat 346 366 IPR001611 GO:0005515(InterPro)
Hepe04g2125 962 Pfam Leucine Rich Repeat 107 122 IPR001611 GO:0005515(InterPro)
Hepe04g2125 962 Pfam Leucine Rich Repeat 466 488 IPR001611 GO:0005515(InterPro)
Hepe04g2125 962 Pfam Leucine Rich Repeat 443 464 IPR001611 GO:0005515(InterPro)
Hepe04g2125 962 Pfam Leucine Rich Repeat 275 296 IPR001611 GO:0005515(InterPro)
Hepe04g2125 962 Pfam Leucine Rich Repeat 490 512 IPR001611 GO:0005515(InterPro)
Hepe04g2125 962 Pfam Leucine Rich Repeat 250 272 IPR001611 GO:0005515(InterPro)
Hepe04g2125 962 Pfam Leucine Rich Repeat 154 175 IPR001611 GO:0005515(InterPro)
Hepe04g2125 962 SMART serkin_6 676 950 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Hepe04g2125 962 FunFam Leucine-rich repeat receptor-like serine/threonine-protein kinase BAM1 645 753 - -
Hepe04g2125 962 SMART LRR_typ_2 175 203 IPR003591 -
Hepe04g2125 962 SMART LRR_typ_2 536 560 IPR003591 -
Hepe04g2125 962 SMART LRR_typ_2 105 127 IPR003591 -
Hepe04g2125 962 SMART LRR_typ_2 488 512 IPR003591 -
Hepe04g2125 962 SMART LRR_typ_2 248 271 IPR003591 -
Hepe04g2125 962 SMART LRR_typ_2 272 295 IPR003591 -
Hepe04g2125 962 SMART LRR_typ_2 464 487 IPR003591 -
Hepe04g2125 962 SMART LRR_typ_2 345 368 IPR003591 -
Hepe04g2125 962 SUPERFAMILY L domain-like 344 597 - -
Hepe04g2125 962 ProSiteProfiles Leucine-rich repeat profile. 346 367 IPR001611 GO:0005515(InterPro)
Hepe04g2125 962 Pfam Protein tyrosine and serine/threonine kinase 678 950 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Hepe04g2125 962 ProSitePatterns Serine/Threonine protein kinases active-site signature. 798 810 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Hepe04g2125 962 SUPERFAMILY Protein kinase-like (PK-like) 672 950 IPR011009 -
Hepe04g2125 962 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 32 954 IPR050647 -
Hepe04g2125 962 FunFam Leucine-rich repeat receptor-like serine/threonine-protein kinase BAM3 324 609 - -
Hepe04g2125 962 Gene3D Ribonuclease Inhibitor 36 191 IPR032675 -
Hepe04g2125 962 Gene3D Ribonuclease Inhibitor 192 294 IPR032675 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Hepe04g2125 Hepe-Chr4:76043627 Hepe07g0583 Hepe-Chr7:6307627 3.28e-151 dispersed
Hepe04g2125 Hepe-Chr4:76043627 Hepe04g1362 Hepe-Chr4:69258205 2.70e-155 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
72780 PF07714 PK_Tyr_Ser-Thr 6.70E-47 CL0016 Hepe PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hepe04g2125 - - - 0.0