Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Hepe05g0002 ATGGGCTTAAAAGGTAAACTTGGTGGTGACATTGGAGGCCTCACTGAACTAAACTCATTGGACCTTTCCTTCAATAAAGATCTCACTGGCTCAATCTCTCCAGCAATAGGGGATTTACAGAATCTGGATATCTTGATTCTAGCTGGATGTGGCTTCAGTGGCAATATTCCTCAAGAGCTGGGCAAACTTTCTGAGCTATCCTTCTTGGCTTTGAATTCTAACAACTTCACCGGTAACATACCGCCCTCTCTGGGACGACTCTCCAAACTCTATTGGCTGGACCTGGCAGATAATCAATTAACAGGTAGTCTCCCAGTCTCCACTTCTGATTCTCCTGGTTTGGACCTCCTTCTGATGGCTAAACATTTTCATTTCAACAAAAACCAGCTATCAGGTTCCATTCCACCTAATCTTTTTAGCTCTGAAATGGTATTAATACACATATTATTTGATGGAAATAAATTATCTGGGAGCATCCCACCAACATTGGGACTTGTTAAGAACCTTGAGGTTCTTCGACTGGATCGGAATTCTCTAACAGGAACTGTCCCATCAAATCTGAACAACCTAACAAAAATCAATGAATTGAATTTAGCCAACAATAAGTTGACTGGTCCAATGCCAAACTTAACTCAAATAAGCTCACTAAATTATGTGGACCTTAGTAACAACTCGTTTGATCCATCAGTAGCTCCGGAATGGTTCTCAAATCTACAACTGCTCACCACTCTGGTTGTTGAACATGGGTCAATACAAGGACCTGTGCCGCAAGGAGTCTTTAGCTTACCACAAATACAACAAATAAAACTGAAGAACAATGCATTCAATGGGACATTAGATATGGGTGACAAGATCAGCCCACAGTTGCAGCTGGTTGATTTGCAAAGTAACAGTATTTCCCATTTCACCCTTGGTTCAGGATATACCAAAACTTTGACGCTGCTAGGGAATCCTGTGTGTAGCACCGATGGTACGCTCGCAAATACGAACTATTGCCAGCTTCAAAATCAGCCGGTGAAACCATATTCTACCAGCCTTGCCAACTGTGGAACTCAGACATGTCCTACTGATGAGGAGTTAAGCCCTCAGAGTTGTGAATGTGCCTTTCCATTTGAAGGGACCTTATACTTTAGAGCACCCTCCTTCAGGGAATTGTCCAATGCCACTTTGTTTCATTTATTGGAAAGTACCCTTTGGACCAAACTGGTCCTTACGCCTGGTTCAGTTTCTATTCAAAACCCTTTCTTTAATGTTGACGATTATCTTCAGATGCAGCTTGCACTTTTTCCACCCAACGGAAAGTATTTTAATCGGTCGGATATTCAGAGGATTGGGTTTTACTTGAGTAATCAAACTTACAAGCCTCCCCCAATATTTGGGCCATATTATTTCATTGCATCTCCCTATGATTTTTCAGACACGACTAAGAAAACTTCAATCAGCCGTGGAGTGATAATTGGGGTAGCTATTGGTTGTGCCTTTCTGGTTCTAGGCCTCATTGGAGTTGGAATATACGCATTTCGGCAAAAGAAACGTGCAGAAAAGGCCATCGGATTGAGTCGACCATTCGCTTCTTGGGTACCAAGTGGAAATGATAGTGGAGGTGCACCACAGTTGAAGGGAGCCAGATGGTTTTCTTTTGATGAACTTAAAAAATCTACAAATAATTTCTCAATGAGCAATGAGATAGGATCTGGAGGATATGGCAAGGTATATAGAGGAATGCTTGTGGATGGACAAGTAGTTGCAGTCAAAAGAGCTCAACAAGGATCAATGCAGGGTGGGCTCGAGTTCAAGACGGAAATCGAACTGCTTTCACGAGTTCATCACAAGAACCTTGTTGGGCTCGTGGGATTTTGTTTTGATCAAGGAGAACAGATGCTTGTTTATGAATTTATGCCTAATGGAACACTGAGAGACAGCCTATCTGGAAAATCTGGTATTAGTCTTGATTGGAAGAGAAGACTTCGTATTGCACTTGGGTCTGCGAGAGGATTGACTTACTTACATGAACTTGCTAATCCTCCCATAATCCATAGAGACGTTAAGTCAACCAACATTCTATTGGATGAACATTTAAATGCCAAAGTTGCAGATTTTGGGTTGTCCAAGCTTGTCTCAGACAGTGAAAAGGGACATGTTTCTACTCAAGTGAAAGGAACACTGGGTTATTTGGATCCTGAATATTACATGACTCAACAATTGAGTGAGAAAAGTGATGTGTATAGCTTTGGAGTGGTTATGCTGGAATTGGTAACTGCAAAGTTGCCTATTGAGAAAGGAAAGTACGTAGTTCGTGAGGTGAGAATGTTGATGAATAAAAGTGAAGAAGAATATTACGGTGTGAAGCAGATAATGGATGCAACCATAATAAACAAGACAACTATTATTGGTCTTGGAAGGTTCTTGGAGTTGGCGATGTCATGCGTTGAAGAATCAGCTGCAGAGCGTCCTACAATGAGTGAAGTGGTGAAGGAAATTGAGAGTATTTTGCAGAATGATGGAATAAATACCAATACAACGTCTGCATCTTCATCTGCAACCGACTTTGGAACTTCCAAAACAGCTCCTAGGCATCCCTATAGTAATAATAGTAATAATGACAGTAGTAATAATGCCTTTGATTACAGTGGTGGATACACTCCTGCAACTAAAGTGGAACCCAAATAG 2670 41.31 MGLKGKLGGDIGGLTELNSLDLSFNKDLTGSISPAIGDLQNLDILILAGCGFSGNIPQELGKLSELSFLALNSNNFTGNIPPSLGRLSKLYWLDLADNQLTGSLPVSTSDSPGLDLLLMAKHFHFNKNQLSGSIPPNLFSSEMVLIHILFDGNKLSGSIPPTLGLVKNLEVLRLDRNSLTGTVPSNLNNLTKINELNLANNKLTGPMPNLTQISSLNYVDLSNNSFDPSVAPEWFSNLQLLTTLVVEHGSIQGPVPQGVFSLPQIQQIKLKNNAFNGTLDMGDKISPQLQLVDLQSNSISHFTLGSGYTKTLTLLGNPVCSTDGTLANTNYCQLQNQPVKPYSTSLANCGTQTCPTDEELSPQSCECAFPFEGTLYFRAPSFRELSNATLFHLLESTLWTKLVLTPGSVSIQNPFFNVDDYLQMQLALFPPNGKYFNRSDIQRIGFYLSNQTYKPPPIFGPYYFIASPYDFSDTTKKTSISRGVIIGVAIGCAFLVLGLIGVGIYAFRQKKRAEKAIGLSRPFASWVPSGNDSGGAPQLKGARWFSFDELKKSTNNFSMSNEIGSGGYGKVYRGMLVDGQVVAVKRAQQGSMQGGLEFKTEIELLSRVHHKNLVGLVGFCFDQGEQMLVYEFMPNGTLRDSLSGKSGISLDWKRRLRIALGSARGLTYLHELANPPIIHRDVKSTNILLDEHLNAKVADFGLSKLVSDSEKGHVSTQVKGTLGYLDPEYYMTQQLSEKSDVYSFGVVMLELVTAKLPIEKGKYVVREVRMLMNKSEEEYYGVKQIMDATIINKTTIIGLGRFLELAMSCVEESAAERPTMSEVVKEIESILQNDGINTNTTSASSSATDFGTSKTAPRHPYSNNSNNDSSNNAFDYSGGYTPATKVEPK 889
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 83401 88641 - Hsped.05g00020.1 Hepe05g0002 569267
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Hepe05g0002 889 ProSitePatterns Serine/Threonine protein kinases active-site signature. 677 689 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Hepe05g0002 889 FunFam LRR receptor-like serine/threonine-protein kinase HSL2 633 845 - -
Hepe05g0002 889 SUPERFAMILY Protein kinase-like (PK-like) 543 846 IPR011009 -
Hepe05g0002 889 FunFam Predicted protein 112 335 - -
Hepe05g0002 889 FunFam Leucine-rich repeat receptor-like protein kinase PXL1 9 108 - -
Hepe05g0002 889 PANTHER RECEPTOR-LIKE PROTEIN 55 18 828 - -
Hepe05g0002 889 Gene3D Ribonuclease Inhibitor 1 118 IPR032675 -
Hepe05g0002 889 Gene3D Ribonuclease Inhibitor 119 337 IPR032675 -
Hepe05g0002 889 FunFam Leucine-rich repeat protein kinase family protein 527 632 - -
Hepe05g0002 889 Pfam Protein tyrosine and serine/threonine kinase 558 826 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Hepe05g0002 889 ProSitePatterns Protein kinases ATP-binding region signature. 563 585 IPR017441 GO:0005524(InterPro)
Hepe05g0002 889 CDD STKc_IRAK 563 830 - -
Hepe05g0002 889 Gene3D Transferase(Phosphotransferase) domain 1 633 870 - -
Hepe05g0002 889 MobiDBLite consensus disorder prediction 835 889 - -
Hepe05g0002 889 SMART serkin_6 557 831 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Hepe05g0002 889 Pfam Leucine Rich Repeat 66 87 IPR001611 GO:0005515(InterPro)
Hepe05g0002 889 Pfam Leucine Rich Repeat 168 190 IPR001611 GO:0005515(InterPro)
Hepe05g0002 889 MobiDBLite consensus disorder prediction 835 878 - -
Hepe05g0002 889 SUPERFAMILY L domain-like 5 327 - -
Hepe05g0002 889 ProSiteProfiles Protein kinase domain profile. 557 831 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Hepe05g0002 889 Gene3D Phosphorylase Kinase; domain 1 531 632 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Hepe05g0002 Hepe-Chr5:83401 Hepe05g0997 Hepe-Chr5:45839823 0.0 dispersed
Hepe02g2483 Hepe-Chr2:71356376 Hepe05g0002 Hepe-Chr5:83401 4.04e-55 transposed
Hepe10g1396 Hepe-Chr10:50345697 Hepe05g0002 Hepe-Chr5:83401 2.30e-71 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
72781 PF07714 PK_Tyr_Ser-Thr 8.00E-48 CL0016 Hepe PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hepe05g0002 - - - 0.0