Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Hepe05g0004 ATGGGCAACTGCGGTACTAGAGAAGAGTCTGCAGTTGTTTCCAATGTTCAGGTTCAACAACAGCTGCATACTTCATCCTCTTCCGCCACCAACAATGCTACAGACAAAAGGCATATTCATAACCGCTCCATATCAGATCTAAGCGATCCTTCCACCCCTCGCAACCTCGACGACTTTAGAAACAATTCGGTACTTTACACCCATGTTATCGCCTTCACATTATACGAACTCGAAACTATCACCAAGAGTTTTCGTTCCGATTACATTCTCGGGGAGGGCGGTTTTGGAACTGTTTATAAAGGTTACATTGACGAGAACGTCAGGGTTGGCCTCAAATCTCTTCCTGTCGCTGTCAAGGTTCTCAATAAGGAAGGTCTCCAGGGCCACCGAGAATGGCTTACAGAAGTTAACTTTCTTGGTCAGCTAAGACATCCAAACCTTGTCAAGTTGATTGGTTACTGCTGCGAGGATGATCACAGATTACTTGTCTATGAGTTCATGTTTAGAGGAAGCCTTGAAAACCACCTCTTTCGAAAGACAACTGTTCCATTACCATGGGCAAGAAGAATGATGATAGCTCTTGGAGCGGCCAAGGGACTTGCTTTCCTTCACAATGCTGAAAGGCCCGTTATCTATCGGGATTTTAAAACCTCTAATATACTGTTGGACTCTGACTATGCAGCCAAGCTTTCTGATTTTGGGCTTGCAAAAGCTGGACCACAAGGTGATGAGACGCATGTTTCAACTCGAGTAATGGGTACTTATGGTTATGCTGCCCCCGAATATGTCATGACTGGGCACTTGACAGCAAGGAGTGATGTATACAGCTTCGGTGTTGTTCTTCTGGAGCTTTTGACGGGAAGAAAGTCTGTTGACAAGACAAAACCAAGCAAGGAGCAGAATTTGGTAGATTGGGCCCGACCTAAGCTAAATGACAAGAGGAAGTTGCTACAAATAATTGACCCCAGATTAGAAAATCAATACTCGATAAGGGCAGCACAGAAGGCGTGCAGCCTGGCGTACTATTGCCTGAGTCAGAATCCGAAAGCAAGACCATTAATGAGCGATGTGGTTGAAACTTTGGAACCATTACAGAGCAGTAACGGTGCAACTGAATACTCATCAACGGGAAGGGGCATCCCAGATTACAGGTTGCGGCAACAAAGGTTTACCGACAATGTTGGGCCAGGGGCGGCTAGTTGCCGGTCTCCTAACCCGAACTGTTCCCCGAGCGGCCCTGCAGCATGTAGGGTTAGATGA 1260 46.43 MGNCGTREESAVVSNVQVQQQLHTSSSSATNNATDKRHIHNRSISDLSDPSTPRNLDDFRNNSVLYTHVIAFTLYELETITKSFRSDYILGEGGFGTVYKGYIDENVRVGLKSLPVAVKVLNKEGLQGHREWLTEVNFLGQLRHPNLVKLIGYCCEDDHRLLVYEFMFRGSLENHLFRKTTVPLPWARRMMIALGAAKGLAFLHNAERPVIYRDFKTSNILLDSDYAAKLSDFGLAKAGPQGDETHVSTRVMGTYGYAAPEYVMTGHLTARSDVYSFGVVLLELLTGRKSVDKTKPSKEQNLVDWARPKLNDKRKLLQIIDPRLENQYSIRAAQKACSLAYYCLSQNPKARPLMSDVVETLEPLQSSNGATEYSSTGRGIPDYRLRQQRFTDNVGPGAASCRSPNPNCSPSGPAACRVR 419
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 122965 138022 - Hsped.05g00040.1 Hepe05g0004 569269
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Hepe05g0004 419 FunFam Serine/threonine-protein kinase BIK1 51 166 - -
Hepe05g0004 419 Gene3D Phosphorylase Kinase; domain 1 51 166 - -
Hepe05g0004 419 SUPERFAMILY Protein kinase-like (PK-like) 59 362 IPR011009 -
Hepe05g0004 419 CDD STKc_IRAK 90 364 - -
Hepe05g0004 419 ProSitePatterns Protein kinases ATP-binding region signature. 90 119 IPR017441 GO:0005524(InterPro)
Hepe05g0004 419 Gene3D Transferase(Phosphotransferase) domain 1 167 378 - -
Hepe05g0004 419 MobiDBLite consensus disorder prediction 18 34 - -
Hepe05g0004 419 MobiDBLite consensus disorder prediction 394 419 - -
Hepe05g0004 419 PANTHER OS01G0588500 PROTEIN-RELATED 61 366 IPR050823 -
Hepe05g0004 419 Pfam Protein kinase domain 88 359 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Hepe05g0004 419 FunFam Probable serine/threonine-protein kinase PBL8 167 378 - -
Hepe05g0004 419 ProSitePatterns Serine/Threonine protein kinases active-site signature. 210 222 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Hepe05g0004 419 ProSiteProfiles Protein kinase domain profile. 84 365 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Hepe05g0004 419 MobiDBLite consensus disorder prediction 18 53 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Hepe03g1424 Hepe-Chr3:71004565 Hepe05g0004 Hepe-Chr5:122965 2.28e-128 dispersed
Hepe05g0004 Hepe-Chr5:122965 Hepe08g2060 Hepe-Chr8:57852651 4.62e-153 dispersed
Hepe10g1505 Hepe-Chr10:51830286 Hepe05g0004 Hepe-Chr5:122965 3.92e-26 dispersed
Hepe05g0004 Hepe-Chr5:122965 Hepe08g2697 Hepe-Chr8:68978204 2.06e-153 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
72782 PF00069 Pkinase 6.40E-48 CL0016 Hepe PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hepe05g0004 - - - 0.0