Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Hepe05g0013 ATGGTTTCGTCTCAGTTTCGTGGCTTTACCAAGACTAGCAAGAGCAACCCGATTCGAACTCATCTTCTTTTTCCTACTAACACTACGGATTGTGCACCTCTGGATTCTGTTAATCTGGATTTCTCTGATGTATTTGGCTCTATTTCGCTTCATGCTTCAACTGAAGTGGATGCTATTGATTTAGATTTTAATGTATGCCAAGAAGATTCGTGTGAGCTTATATATGATGATCCTGAAGTTATTTACAACCGATCTCATTCTTTGGTTGGACCCTCTTCTTGTGCAAATCAAACCCTTAAGCTAAGCAAACTAACTATTCCTGAGACTGAGGATTTGGGGGTTGCATGTATCAGCAAGGAGACCAACAACAAACTTCAAGAACCTTTAAGTGATTCTTTTTCTGATAGAACTCTTGAAGATATTGATAGAAGTTACATGAAAGTTGAGAGTGTTGGGATCGATAACTTTGAAGTTCTGAAGGTTGTTGGGCAGGGTGCATTTGCTAAGGTTTATCAGGTGAGGCGAAAGGGTACGCTGGAGATATATGCAATGAAGGTCATGCGAAAGGACAAGATAATGGAGAAGAATCATGTTGAATACATGAAAGCCGAGAGGGATATTTTAACAAAAACGGACCATCCATTCATTGTCCAACTAAGATACTCATTCCAAACAAAATACAGGCTATATCTTGTTCTGGATTTTGTAAATGGTGGTCATCTTTTCTTTCAGCTTTATCACCATGGGCTTTTCAGGTACCTTTTTCTTAAGGAATTCTATACTGATTTGGAATGTTTGTTTTTAATGCTCAATTTTGTCTCTTTCAGAGAAGATCTTGCTCGTATTTATGCTGCTGAGATTGTTTTGGCTGTTTCTCATCTCCATTCAAATGGCATAATGCACAGGGATCTAAAACCTGAAAATATTTTATTGGATGACCTTGGCCATGTCATGTTGACTGATTTCGGTCTGGCAAAAGAATTTGGAGAGAATACAAGATCGAATTCTATATGTGGAACAGTAGAATATATGCCACCGGAAATAGTTCTTGGGAAAGGCCACGACAAGGCTGCAGATTGGTGGAGTGTAGGAATACTATTATTTGAAATGCTTACTGGGAAGCCTCCTTTTACTGGGAATCGGGAGAAAGTCCAACAAAAGATAGTGAAGGACAAGATCAAGCTGCCAGCATATTTGTCTAGTGAAGCACATTCTCTTTTAAAAGGGCTGCTTCAAAGGGAGGCGGGTAAGCGATTGGGCAGTGGTCCTATGGGAAGTGAGGAAATCAAACGCCACAAATGGTTCAAACCAATCAATTGGAAGAAATTGGAGAAGAGGGAAATCCAACCAAGCTTTCGGCCTGAAGTAGCTGGGAAACACTGCGTTGCCAACTTTGAGAAGCGCTGGACTGAAATGCCACTTGTTGATTCTCCGATTGTCAGCCCTAAAACCGATGGGAACCCCTTCACTGGCTTCAGCTATGTCAAACCCGCAGACTCATTTTCCATTTTGAATTGTGAAAGCGACTTCTAA 1533 40.57 MVSSQFRGFTKTSKSNPIRTHLLFPTNTTDCAPLDSVNLDFSDVFGSISLHASTEVDAIDLDFNVCQEDSCELIYDDPEVIYNRSHSLVGPSSCANQTLKLSKLTIPETEDLGVACISKETNNKLQEPLSDSFSDRTLEDIDRSYMKVESVGIDNFEVLKVVGQGAFAKVYQVRRKGTLEIYAMKVMRKDKIMEKNHVEYMKAERDILTKTDHPFIVQLRYSFQTKYRLYLVLDFVNGGHLFFQLYHHGLFRYLFLKEFYTDLECLFLMLNFVSFREDLARIYAAEIVLAVSHLHSNGIMHRDLKPENILLDDLGHVMLTDFGLAKEFGENTRSNSICGTVEYMPPEIVLGKGHDKAADWWSVGILLFEMLTGKPPFTGNREKVQQKIVKDKIKLPAYLSSEAHSLLKGLLQREAGKRLGSGPMGSEEIKRHKWFKPINWKKLEKREIQPSFRPEVAGKHCVANFEKRWTEMPLVDSPIVSPKTDGNPFTGFSYVKPADSFSILNCESDF 510
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 171988 175668 + Hsped.05g00130.1 Hepe05g0013 569278
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Hepe05g0013 510 CDD STKc_AGC 162 435 IPR045270 GO:0004674(InterPro)|GO:0005524(InterPro)
Hepe05g0013 510 ProSiteProfiles AGC-kinase C-terminal domain profile. 436 504 IPR000961 GO:0004674(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Hepe05g0013 510 Pfam Protein kinase domain 156 435 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Hepe05g0013 510 SMART pkinase_C_6 436 496 IPR000961 GO:0004674(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Hepe05g0013 510 Pfam Protein kinase C terminal domain 457 494 IPR017892 GO:0004674(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Hepe05g0013 510 ProSiteProfiles Protein kinase domain profile. 156 435 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Hepe05g0013 510 SUPERFAMILY Protein kinase-like (PK-like) 153 493 IPR011009 -
Hepe05g0013 510 PANTHER RIBOSOMAL PROTEIN S6 KINASE 124 498 - -
Hepe05g0013 510 FunFam Non-specific serine/threonine protein kinase 153 252 - -
Hepe05g0013 510 ProSitePatterns Serine/Threonine protein kinases active-site signature. 299 311 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Hepe05g0013 510 Gene3D Phosphorylase Kinase; domain 1 153 472 - -
Hepe05g0013 510 Gene3D Transferase(Phosphotransferase) domain 1 240 455 - -
Hepe05g0013 510 SMART serkin_6 156 435 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Hepe05g0013 510 FunFam Non-specific serine/threonine protein kinase 264 454 - -
Hepe05g0013 510 ProSitePatterns Protein kinases ATP-binding region signature. 162 185 IPR017441 GO:0005524(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Hepe05g0013 Hepe-Chr5:171988 Hepe09g0158 Hepe-Chr9:1256377 1.34e-157 dispersed
Hepe05g0013 Hepe-Chr5:171988 Hepe02g0334 Hepe-Chr2:3193228 3.86e-54 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
72783 PF00069 Pkinase 1.20E-67 CL0016 Hepe PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hepe05g0013 K04688 - mdm:103423523 704.901