Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Hepe05g0013 | ATGGTTTCGTCTCAGTTTCGTGGCTTTACCAAGACTAGCAAGAGCAACCCGATTCGAACTCATCTTCTTTTTCCTACTAACACTACGGATTGTGCACCTCTGGATTCTGTTAATCTGGATTTCTCTGATGTATTTGGCTCTATTTCGCTTCATGCTTCAACTGAAGTGGATGCTATTGATTTAGATTTTAATGTATGCCAAGAAGATTCGTGTGAGCTTATATATGATGATCCTGAAGTTATTTACAACCGATCTCATTCTTTGGTTGGACCCTCTTCTTGTGCAAATCAAACCCTTAAGCTAAGCAAACTAACTATTCCTGAGACTGAGGATTTGGGGGTTGCATGTATCAGCAAGGAGACCAACAACAAACTTCAAGAACCTTTAAGTGATTCTTTTTCTGATAGAACTCTTGAAGATATTGATAGAAGTTACATGAAAGTTGAGAGTGTTGGGATCGATAACTTTGAAGTTCTGAAGGTTGTTGGGCAGGGTGCATTTGCTAAGGTTTATCAGGTGAGGCGAAAGGGTACGCTGGAGATATATGCAATGAAGGTCATGCGAAAGGACAAGATAATGGAGAAGAATCATGTTGAATACATGAAAGCCGAGAGGGATATTTTAACAAAAACGGACCATCCATTCATTGTCCAACTAAGATACTCATTCCAAACAAAATACAGGCTATATCTTGTTCTGGATTTTGTAAATGGTGGTCATCTTTTCTTTCAGCTTTATCACCATGGGCTTTTCAGGTACCTTTTTCTTAAGGAATTCTATACTGATTTGGAATGTTTGTTTTTAATGCTCAATTTTGTCTCTTTCAGAGAAGATCTTGCTCGTATTTATGCTGCTGAGATTGTTTTGGCTGTTTCTCATCTCCATTCAAATGGCATAATGCACAGGGATCTAAAACCTGAAAATATTTTATTGGATGACCTTGGCCATGTCATGTTGACTGATTTCGGTCTGGCAAAAGAATTTGGAGAGAATACAAGATCGAATTCTATATGTGGAACAGTAGAATATATGCCACCGGAAATAGTTCTTGGGAAAGGCCACGACAAGGCTGCAGATTGGTGGAGTGTAGGAATACTATTATTTGAAATGCTTACTGGGAAGCCTCCTTTTACTGGGAATCGGGAGAAAGTCCAACAAAAGATAGTGAAGGACAAGATCAAGCTGCCAGCATATTTGTCTAGTGAAGCACATTCTCTTTTAAAAGGGCTGCTTCAAAGGGAGGCGGGTAAGCGATTGGGCAGTGGTCCTATGGGAAGTGAGGAAATCAAACGCCACAAATGGTTCAAACCAATCAATTGGAAGAAATTGGAGAAGAGGGAAATCCAACCAAGCTTTCGGCCTGAAGTAGCTGGGAAACACTGCGTTGCCAACTTTGAGAAGCGCTGGACTGAAATGCCACTTGTTGATTCTCCGATTGTCAGCCCTAAAACCGATGGGAACCCCTTCACTGGCTTCAGCTATGTCAAACCCGCAGACTCATTTTCCATTTTGAATTGTGAAAGCGACTTCTAA | 1533 | 40.57 | MVSSQFRGFTKTSKSNPIRTHLLFPTNTTDCAPLDSVNLDFSDVFGSISLHASTEVDAIDLDFNVCQEDSCELIYDDPEVIYNRSHSLVGPSSCANQTLKLSKLTIPETEDLGVACISKETNNKLQEPLSDSFSDRTLEDIDRSYMKVESVGIDNFEVLKVVGQGAFAKVYQVRRKGTLEIYAMKVMRKDKIMEKNHVEYMKAERDILTKTDHPFIVQLRYSFQTKYRLYLVLDFVNGGHLFFQLYHHGLFRYLFLKEFYTDLECLFLMLNFVSFREDLARIYAAEIVLAVSHLHSNGIMHRDLKPENILLDDLGHVMLTDFGLAKEFGENTRSNSICGTVEYMPPEIVLGKGHDKAADWWSVGILLFEMLTGKPPFTGNREKVQQKIVKDKIKLPAYLSSEAHSLLKGLLQREAGKRLGSGPMGSEEIKRHKWFKPINWKKLEKREIQPSFRPEVAGKHCVANFEKRWTEMPLVDSPIVSPKTDGNPFTGFSYVKPADSFSILNCESDF | 510 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
5 | 171988 | 175668 | + | Hsped.05g00130.1 | Hepe05g0013 | 569278 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Hepe05g0013 | 510 | CDD | STKc_AGC | 162 | 435 | IPR045270 | GO:0004674(InterPro)|GO:0005524(InterPro) | |
Hepe05g0013 | 510 | ProSiteProfiles | AGC-kinase C-terminal domain profile. | 436 | 504 | IPR000961 | GO:0004674(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
Hepe05g0013 | 510 | Pfam | Protein kinase domain | 156 | 435 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
Hepe05g0013 | 510 | SMART | pkinase_C_6 | 436 | 496 | IPR000961 | GO:0004674(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
Hepe05g0013 | 510 | Pfam | Protein kinase C terminal domain | 457 | 494 | IPR017892 | GO:0004674(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
Hepe05g0013 | 510 | ProSiteProfiles | Protein kinase domain profile. | 156 | 435 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
Hepe05g0013 | 510 | SUPERFAMILY | Protein kinase-like (PK-like) | 153 | 493 | IPR011009 | - | |
Hepe05g0013 | 510 | PANTHER | RIBOSOMAL PROTEIN S6 KINASE | 124 | 498 | - | - | |
Hepe05g0013 | 510 | FunFam | Non-specific serine/threonine protein kinase | 153 | 252 | - | - | |
Hepe05g0013 | 510 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 299 | 311 | IPR008271 | GO:0004672(InterPro)|GO:0006468(InterPro) | |
Hepe05g0013 | 510 | Gene3D | Phosphorylase Kinase; domain 1 | 153 | 472 | - | - | |
Hepe05g0013 | 510 | Gene3D | Transferase(Phosphotransferase) domain 1 | 240 | 455 | - | - | |
Hepe05g0013 | 510 | SMART | serkin_6 | 156 | 435 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
Hepe05g0013 | 510 | FunFam | Non-specific serine/threonine protein kinase | 264 | 454 | - | - | |
Hepe05g0013 | 510 | ProSitePatterns | Protein kinases ATP-binding region signature. | 162 | 185 | IPR017441 | GO:0005524(InterPro) |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Hepe05g0013 | Hepe-Chr5:171988 | Hepe09g0158 | Hepe-Chr9:1256377 | 1.34e-157 | dispersed | |
Hepe05g0013 | Hepe-Chr5:171988 | Hepe02g0334 | Hepe-Chr2:3193228 | 3.86e-54 | transposed |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
72783 | PF00069 | Pkinase | 1.20E-67 | CL0016 | Hepe | PK |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Hepe05g0013 | K04688 | - | mdm:103423523 | 704.901 |