Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Hepe05g0019 ATGTTTTTTAAACTATTCCTCATTCTTCTTGTCTTTGCTCCTGCTGCTGTTTACTCTTTGGACACTGTTTTCAACGATGATGTTCTGGGGTTGATAGTCTTTAAAGCTGGCCTTCAAGATCCCATGGGTAAACTTCTGACATGGAATGAAGATGATGAAACTCCCTGCAATTGGTTTGGTGTCAAATGCAATCCTAAAACCAATAGGGTTTCTGAACTTGTTCTTGATGGATTCTCTTTGTCTGGTCACATCGATCGTGGACTTCTGAGGTTGCAATTCCTTCAAATCCTCTCCCTTGCCAACAACAACTTCACTGGCACAATCAACTCTGCTCTTGCCCATCTTCCAAATTTGCAAGTTATTGATTTGAGTGACAACAGCTTATCTGGACCAATTCCTGAACAACTCTTCCTGCAATGTGGTTCTGTAAGAGTTATTTCATTTGCTAGAAACAATCTCACAGGAAATGTCCCTCAATCCTTAACCTCTTGCTTCTCTCTGGAGCTTCTCAACTTCTCTTCCAATCACCTATCTGGGAAATTGCCTTCTGGGTTATGGTATTTGAGGGGGCTTCAGTCTTTGGATTTCTCTGACAACTTGCTTCAGGGCCAGATTCCTCCTGGAATTCAAAATTTATATGATTTGAGATTTGTTAGCTTACACAAGAATCGGTTTTCTGGAAGGCTTCCTGAGGATATTGGTAGCTGCTTACTTTTAAAATCAATTGATTTTAGTGAGAATTTCCTTTCTGGGGGTCTTCCAGAGTCAATGCAGATGCTCAGTTCTTGCACTTATTTGAATTTACGAGGAAATTCTCTCGCGGGCGAAGTCCCTCGTTGGATTGGCGAACTTAAAAATCTCGAGACTTTAGATCTTTCTACCAATAACTTTTCTGGTCAGGTACCGAGTTCGATGGGCAACCTCCAATTGTTGAAGAAGTTTAATGTATCCATGAACTATTTTACTGGAAACTTGCCAGAATCCATGGCAAATTGTAATAGCCTCTTGAGTATTGATGCTAGCCATAATCATTTGTCTGGCAATCTTCCTTCATGGATTTTTAGGACAGCTATGTCAAGCGTTGCACTCTCTTCCTACAAACTGGGAGAAAACCTTTCATCTCGAACCGCTTTTGAAGGTCTTCAAGTTTTAGATTTATCTTCAAATGTGTTCTCTGGTCACATTCCATCTAATGTTGGAGAACTTAGTAACTTGCAGTTGCTGAATATATCAAGAAACCATCTGATGGGTTGTATTCCAGGGAGCATTGGTGAACTAAAATCAGTATATGCTCTTGACTTGAGTGAGAATCAGTTAAATGGAAGTATTCCTGATGAAATTGGAGGAGCAATCTCACTCAAGGAGTTGAGGCTGGAGAAGAACTTCCTCACTGGGGAAGTTCCAATCAAGATTAACAAATGCTCGTTGTTAACATCATTGATTCTTTCTCACAACAACCTCACAGGCTCAATTCCTGCTGGCGTTGCAAATCTCTCCAACCTTGAAAATGTAGACTTATCTTTCAACAAACTGTCCGGAAGCCTGCCCAAGGAGCTGACAAATCTTTCCCACCTGCTCTCCTTTAATATCTCCCACAATCACCTTGAAGGAGAACTTCCAGTTGGGGGCTTCTTCAACACCATATCTCCCTTGTCTATATCAAATAACCCCTCTCTTTGTGGTGCTGTTGTCAATAAGTCGTGCCCCTCCGTACATCCAAAACCGATCGTCCTAAACCCAAATTCTTCTGATAGCAATGGCAATTCCCCCTCGCACAAGCATCATCATGATATCATACTCAGCATATCTTCCATTATTGCTATTGGTGCAGCTTCATTTATCTTACTTGGTGTGGCAGCTGTCACTATCCTCAACATCCGTGCAAGGTCCTCACACTCACGTTCTGCTGCTCTTGCATTATCTGCTGGGGGGGAGGATTTTAGCTGCTCTCCGAAAACGAATCCAGACTACGGAAAGCTCGTCATGTTTTCTGGAGATGCAGAGTTTGTAGTTGGTGCCCAAGCATTGCTGAACAAGGACTGCGAACTCGGTCGAGGTGGATTCGGAGTCGTTTACAGAACGGTGCTTCGAGATGAGTGTTTAGTTGCAATCAAGAAGCTAACTGTGACAGGCTTGATCAAGTCACGAGAAGATTTTGGGAGTGAAGTGAAGAAGCTGGGACAGATGAGGCATCACAATCTTGTGGCACTTGAAGGATATTACTGGACAACCTCCTTGCAGCTCCTCATTTATGAATACGTCCCCAATGGAAGTTTGTATAAACATCTACACGATGGAACTGTCGAGAATTGTTTGTCGTGGCGGCAGAGATTCAAGATTGTTCTTGGGATGGCCAAAGGATTGGCTTATTTGCACCATAATAATATCATTCATTACAACTTGAAGTCGACCAATGTTTTGATAGACAGTTGTGGGAAACCAAAAGTGGGGGACTATGGCTTGGCAAGGTTGTTGCCAATGTTAGACCGGTGCATCTTAAGCAGTAAAATCCAAAGTGCTTTGGGATACATGGCTCCAGAGTTTGCCTGCAAAACAGTCACTATAACTGAAAAATGTGATGTCTATGGTTTTGGCATCTTGGTTTTGGAAGTGGTGACAGGAAAAAGACCTGTGGAGTACATGGAAGATGATGTTATAGTGCTCTGTGATATGGTGAGGGCAGCTTTGGATGAAGGCACGGTGGAGCAATGCGTTGACGAGAGGCTCCGATCAAACTTCCGGGTCGAAGAGGCCATTCCTGTAGTGAAACTGGGTTTGATATGTGCATCTCAAGTACCCTCCAACAGGCCAGACATGAATGAGGTTGTCAATATATTAGAGTTGATCCAATCCCCTTCTGAAGCTGACGAGGAGTTGGAATGA 2883 42.87 MFFKLFLILLVFAPAAVYSLDTVFNDDVLGLIVFKAGLQDPMGKLLTWNEDDETPCNWFGVKCNPKTNRVSELVLDGFSLSGHIDRGLLRLQFLQILSLANNNFTGTINSALAHLPNLQVIDLSDNSLSGPIPEQLFLQCGSVRVISFARNNLTGNVPQSLTSCFSLELLNFSSNHLSGKLPSGLWYLRGLQSLDFSDNLLQGQIPPGIQNLYDLRFVSLHKNRFSGRLPEDIGSCLLLKSIDFSENFLSGGLPESMQMLSSCTYLNLRGNSLAGEVPRWIGELKNLETLDLSTNNFSGQVPSSMGNLQLLKKFNVSMNYFTGNLPESMANCNSLLSIDASHNHLSGNLPSWIFRTAMSSVALSSYKLGENLSSRTAFEGLQVLDLSSNVFSGHIPSNVGELSNLQLLNISRNHLMGCIPGSIGELKSVYALDLSENQLNGSIPDEIGGAISLKELRLEKNFLTGEVPIKINKCSLLTSLILSHNNLTGSIPAGVANLSNLENVDLSFNKLSGSLPKELTNLSHLLSFNISHNHLEGELPVGGFFNTISPLSISNNPSLCGAVVNKSCPSVHPKPIVLNPNSSDSNGNSPSHKHHHDIILSISSIIAIGAASFILLGVAAVTILNIRARSSHSRSAALALSAGGEDFSCSPKTNPDYGKLVMFSGDAEFVVGAQALLNKDCELGRGGFGVVYRTVLRDECLVAIKKLTVTGLIKSREDFGSEVKKLGQMRHHNLVALEGYYWTTSLQLLIYEYVPNGSLYKHLHDGTVENCLSWRQRFKIVLGMAKGLAYLHHNNIIHYNLKSTNVLIDSCGKPKVGDYGLARLLPMLDRCILSSKIQSALGYMAPEFACKTVTITEKCDVYGFGILVLEVVTGKRPVEYMEDDVIVLCDMVRAALDEGTVEQCVDERLRSNFRVEEAIPVVKLGLICASQVPSNRPDMNEVVNILELIQSPSEADEELE 960
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 232394 236548 + Hsped.05g00190.1 Hepe05g0019 569284
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Hepe05g0019 960 SMART LRR_typ_2 378 402 IPR003591 -
Hepe05g0019 960 SMART LRR_typ_2 284 308 IPR003591 -
Hepe05g0019 960 SMART LRR_typ_2 522 546 IPR003591 -
Hepe05g0019 960 SMART LRR_typ_2 426 450 IPR003591 -
Hepe05g0019 960 SMART LRR_typ_2 212 236 IPR003591 -
Hepe05g0019 960 SMART LRR_typ_2 188 211 IPR003591 -
Hepe05g0019 960 SMART LRR_typ_2 115 139 IPR003591 -
Hepe05g0019 960 SMART LRR_typ_2 91 114 IPR003591 -
Hepe05g0019 960 SMART LRR_typ_2 498 521 IPR003591 -
Hepe05g0019 960 FunFam Putative LRR receptor-like serine/threonine-protein kinase IRK 25 303 - -
Hepe05g0019 960 Gene3D Transferase(Phosphotransferase) domain 1 754 959 - -
Hepe05g0019 960 Gene3D Ribonuclease Inhibitor 25 180 IPR032675 -
Hepe05g0019 960 Gene3D Phosphorylase Kinase; domain 1 666 753 - -
Hepe05g0019 960 Pfam Leucine rich repeat N-terminal domain 25 64 IPR013210 -
Hepe05g0019 960 Gene3D Ribonuclease Inhibitor 295 571 IPR032675 -
Hepe05g0019 960 FunFam probable LRR receptor-like serine/threonine-protein kinase IRK 754 955 - -
Hepe05g0019 960 PANTHER LEUCINE-RICH REPEAT RECEPTOR PROTEIN KINASE EMS1 66 213 IPR051564 GO:0016020(PANTHER)
Hepe05g0019 960 CDD STKc_IRAK 683 949 - -
Hepe05g0019 960 Pfam Leucine Rich Repeat 432 449 IPR001611 GO:0005515(InterPro)
Hepe05g0019 960 Pfam Leucine Rich Repeat 381 402 IPR001611 GO:0005515(InterPro)
Hepe05g0019 960 Pfam Leucine Rich Repeat 286 308 IPR001611 GO:0005515(InterPro)
Hepe05g0019 960 Pfam Leucine Rich Repeat 191 212 IPR001611 GO:0005515(InterPro)
Hepe05g0019 960 Pfam Leucine Rich Repeat 500 522 IPR001611 GO:0005515(InterPro)
Hepe05g0019 960 Pfam Leucine Rich Repeat 166 188 IPR001611 GO:0005515(InterPro)
Hepe05g0019 960 Pfam Leucine Rich Repeat 117 136 IPR001611 GO:0005515(InterPro)
Hepe05g0019 960 Pfam Leucine Rich Repeat 94 115 IPR001611 GO:0005515(InterPro)
Hepe05g0019 960 Pfam Leucine Rich Repeat 404 426 IPR001611 GO:0005515(InterPro)
Hepe05g0019 960 Pfam Leucine Rich Repeat 264 284 IPR001611 GO:0005515(InterPro)
Hepe05g0019 960 Pfam Leucine Rich Repeat 477 498 IPR001611 GO:0005515(InterPro)
Hepe05g0019 960 Gene3D Ribonuclease Inhibitor 181 280 IPR032675 -
Hepe05g0019 960 SUPERFAMILY RNI-like 242 560 - -
Hepe05g0019 960 Pfam Protein tyrosine and serine/threonine kinase 679 945 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Hepe05g0019 960 SUPERFAMILY L domain-like 25 276 - -
Hepe05g0019 960 SUPERFAMILY Protein kinase-like (PK-like) 680 949 IPR011009 -
Hepe05g0019 960 FunFam probable LRR receptor-like serine/threonine-protein kinase IRK 671 753 - -
Hepe05g0019 960 ProSitePatterns Protein kinases ATP-binding region signature. 683 706 IPR017441 GO:0005524(InterPro)
Hepe05g0019 960 ProSiteProfiles Protein kinase domain profile. 677 949 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Hepe05g0019 960 FunFam Putative LRR receptor-like serine/threonine-protein kinase IRK 304 572 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Hepe01g0640 Hepe-Chr1:68305799 Hepe05g0019 Hepe-Chr5:232394 3.14e-181 dispersed
Hepe05g0019 Hepe-Chr5:232394 Hepe05g1247 Hepe-Chr5:59476002 1.90e-102 dispersed
Hepe05g0019 Hepe-Chr5:232394 Hepe02g3275 Hepe-Chr2:82360636 3.25e-219 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
72784 PF07714 PK_Tyr_Ser-Thr 2.60E-41 CL0016 Hepe PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hepe05g0019 - - - 0.0