Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Hepe05g0029 | ATGAGTTGTAACGAGAAGAATAGAGGGGGAGATGATAGGGAAATCGAGCAGCCGGTTTTGAGGAACTCTGTTGAGGCAGAACGGAAACCGGTCGTCCAAAATGGATCGATAACGGCCCAACAGTTGACGATAGATGAAAATCTTCTTGTTGACCCGAAATTACTATTTATCGGGTCGAAGATTGGCGAAGGTGCCCATGGGAAGGTTTATGAAGGCAGGTACCGGAATCAAATTGTGGCCATTAAAGTTCTCCATCGAGGGAGTACTCCAGAAGAAAGGGCATCACTTGAGAATCGTTTTGCCCGTGAAGTTAATATGATGTCCCGAGTAAAACATGATAATCTTGTCAAGTTTATTGGAGCTTGTAAAGAACCTCTAATGGTGATAGTTACAGAGCTATTACCAGGAATGTCACTCAGGAAGTATCTGATGAGTAATCGTAAACAACAGCTGGACCCTCGGCTGGCCATCAACTTTTCTTTGGATGTTGCTCGTGCTATGGATTGTCTACATGCAAATGGGATTATACATAGAGATCTCAAACCTGACAATTTGTTGCTTACGGCAAATCAAAGGTCTGTGAAGCTGGCAGACTTCGGACTTGCTAGAGAAGAATCCGTGACTGAGATGATGACTGCAGAAACAGGGACTTACCGTTGGATGGCTCCTGAGTTGTATAGCACTGTGACATTGCGCCAAGGAGAGAAGAAGCATTACAACAACAAAGTCGATGTATACAGCTTTGGAATTGTCTTATGGGAACTCTTGACGAACCGAATGCCATTTGAAGGGATGTCCAATTTGCAAGCTGCATATGCTGCTGCTTTTAAGCAAGAGAGACCTAGTATTCCAGGAGACATACCTCCCGATCTAGCATTTATCGTACAGTCATGTTGGGTTGAAGATCCTAACATGAGGCCGAGCTTCAGTCAGATCATCCGCATGCTTAATGAATATCTATTCACACTCCCACCTCCTTCACTATCTTTACCAGCATCTGGTACAACAGAGACAGCAACGACTAGCAATGGTGCCATTACCGAGTTCTCTGCTCGTGCAAGAGGAAAGTTTGGATTCCTTCGCCAACTGTTTGCTGCTAAGAAGGCAAAGAACTCCCAATAA | 1122 | 44.47 | MSCNEKNRGGDDREIEQPVLRNSVEAERKPVVQNGSITAQQLTIDENLLVDPKLLFIGSKIGEGAHGKVYEGRYRNQIVAIKVLHRGSTPEERASLENRFAREVNMMSRVKHDNLVKFIGACKEPLMVIVTELLPGMSLRKYLMSNRKQQLDPRLAINFSLDVARAMDCLHANGIIHRDLKPDNLLLTANQRSVKLADFGLAREESVTEMMTAETGTYRWMAPELYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLTNRMPFEGMSNLQAAYAAAFKQERPSIPGDIPPDLAFIVQSCWVEDPNMRPSFSQIIRMLNEYLFTLPPPSLSLPASGTTETATTSNGAITEFSARARGKFGFLRQLFAAKKAKNSQ | 373 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
5 | 289635 | 293692 | - | Hsped.05g00290.1 | Hepe05g0029 | 569294 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Hepe05g0029 | 373 | FunFam | Kinase suppressor of Ras 1 | 44 | 134 | - | - | |
Hepe05g0029 | 373 | SMART | serkin_6 | 55 | 320 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
Hepe05g0029 | 373 | Pfam | Protein tyrosine and serine/threonine kinase | 57 | 316 | IPR001245 | GO:0004672(InterPro)|GO:0006468(InterPro) | |
Hepe05g0029 | 373 | Gene3D | Transferase(Phosphotransferase) domain 1 | 138 | 324 | - | - | |
Hepe05g0029 | 373 | PANTHER | SERINE-THREONINE PROTEIN KINASE | 49 | 318 | IPR050167 | GO:0004672(PANTHER)|GO:0005737(PANTHER)|GO:0007165(PANTHER) | |
Hepe05g0029 | 373 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 175 | 187 | IPR008271 | GO:0004672(InterPro)|GO:0006468(InterPro) | |
Hepe05g0029 | 373 | PRINTS | Tyrosine kinase catalytic domain signature | 131 | 144 | IPR001245 | GO:0004672(InterPro)|GO:0006468(InterPro) | |
Hepe05g0029 | 373 | PRINTS | Tyrosine kinase catalytic domain signature | 287 | 309 | IPR001245 | GO:0004672(InterPro)|GO:0006468(InterPro) | |
Hepe05g0029 | 373 | PRINTS | Tyrosine kinase catalytic domain signature | 169 | 187 | IPR001245 | GO:0004672(InterPro)|GO:0006468(InterPro) | |
Hepe05g0029 | 373 | PRINTS | Tyrosine kinase catalytic domain signature | 243 | 265 | IPR001245 | GO:0004672(InterPro)|GO:0006468(InterPro) | |
Hepe05g0029 | 373 | ProSiteProfiles | Protein kinase domain profile. | 55 | 320 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
Hepe05g0029 | 373 | CDD | STKc_MAP3K-like | 61 | 316 | - | - | |
Hepe05g0029 | 373 | Gene3D | Phosphorylase Kinase; domain 1 | 43 | 134 | - | - | |
Hepe05g0029 | 373 | SUPERFAMILY | Protein kinase-like (PK-like) | 54 | 332 | IPR011009 | - | |
Hepe05g0029 | 373 | ProSitePatterns | Protein kinases ATP-binding region signature. | 61 | 82 | IPR017441 | GO:0005524(InterPro) |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Hepe02g3073 | Hepe-Chr2:79888743 | Hepe05g0029 | Hepe-Chr5:289635 | 6.98e-145 | dispersed | |
Hepe05g0029 | Hepe-Chr5:289635 | Hepe09g0241 | Hepe-Chr9:2088187 | 6.01e-144 | dispersed | |
Hepe04g1854 | Hepe-Chr4:73514455 | Hepe05g0029 | Hepe-Chr5:289635 | 8.70e-66 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
72786 | PF07714 | PK_Tyr_Ser-Thr | 3.20E-61 | CL0016 | Hepe | PK |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Hepe05g0029 | - | - | - | 0.0 |