Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Hepe05g0029 ATGAGTTGTAACGAGAAGAATAGAGGGGGAGATGATAGGGAAATCGAGCAGCCGGTTTTGAGGAACTCTGTTGAGGCAGAACGGAAACCGGTCGTCCAAAATGGATCGATAACGGCCCAACAGTTGACGATAGATGAAAATCTTCTTGTTGACCCGAAATTACTATTTATCGGGTCGAAGATTGGCGAAGGTGCCCATGGGAAGGTTTATGAAGGCAGGTACCGGAATCAAATTGTGGCCATTAAAGTTCTCCATCGAGGGAGTACTCCAGAAGAAAGGGCATCACTTGAGAATCGTTTTGCCCGTGAAGTTAATATGATGTCCCGAGTAAAACATGATAATCTTGTCAAGTTTATTGGAGCTTGTAAAGAACCTCTAATGGTGATAGTTACAGAGCTATTACCAGGAATGTCACTCAGGAAGTATCTGATGAGTAATCGTAAACAACAGCTGGACCCTCGGCTGGCCATCAACTTTTCTTTGGATGTTGCTCGTGCTATGGATTGTCTACATGCAAATGGGATTATACATAGAGATCTCAAACCTGACAATTTGTTGCTTACGGCAAATCAAAGGTCTGTGAAGCTGGCAGACTTCGGACTTGCTAGAGAAGAATCCGTGACTGAGATGATGACTGCAGAAACAGGGACTTACCGTTGGATGGCTCCTGAGTTGTATAGCACTGTGACATTGCGCCAAGGAGAGAAGAAGCATTACAACAACAAAGTCGATGTATACAGCTTTGGAATTGTCTTATGGGAACTCTTGACGAACCGAATGCCATTTGAAGGGATGTCCAATTTGCAAGCTGCATATGCTGCTGCTTTTAAGCAAGAGAGACCTAGTATTCCAGGAGACATACCTCCCGATCTAGCATTTATCGTACAGTCATGTTGGGTTGAAGATCCTAACATGAGGCCGAGCTTCAGTCAGATCATCCGCATGCTTAATGAATATCTATTCACACTCCCACCTCCTTCACTATCTTTACCAGCATCTGGTACAACAGAGACAGCAACGACTAGCAATGGTGCCATTACCGAGTTCTCTGCTCGTGCAAGAGGAAAGTTTGGATTCCTTCGCCAACTGTTTGCTGCTAAGAAGGCAAAGAACTCCCAATAA 1122 44.47 MSCNEKNRGGDDREIEQPVLRNSVEAERKPVVQNGSITAQQLTIDENLLVDPKLLFIGSKIGEGAHGKVYEGRYRNQIVAIKVLHRGSTPEERASLENRFAREVNMMSRVKHDNLVKFIGACKEPLMVIVTELLPGMSLRKYLMSNRKQQLDPRLAINFSLDVARAMDCLHANGIIHRDLKPDNLLLTANQRSVKLADFGLAREESVTEMMTAETGTYRWMAPELYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLTNRMPFEGMSNLQAAYAAAFKQERPSIPGDIPPDLAFIVQSCWVEDPNMRPSFSQIIRMLNEYLFTLPPPSLSLPASGTTETATTSNGAITEFSARARGKFGFLRQLFAAKKAKNSQ 373
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 289635 293692 - Hsped.05g00290.1 Hepe05g0029 569294
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Hepe05g0029 373 FunFam Kinase suppressor of Ras 1 44 134 - -
Hepe05g0029 373 SMART serkin_6 55 320 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Hepe05g0029 373 Pfam Protein tyrosine and serine/threonine kinase 57 316 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Hepe05g0029 373 Gene3D Transferase(Phosphotransferase) domain 1 138 324 - -
Hepe05g0029 373 PANTHER SERINE-THREONINE PROTEIN KINASE 49 318 IPR050167 GO:0004672(PANTHER)|GO:0005737(PANTHER)|GO:0007165(PANTHER)
Hepe05g0029 373 ProSitePatterns Serine/Threonine protein kinases active-site signature. 175 187 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Hepe05g0029 373 PRINTS Tyrosine kinase catalytic domain signature 131 144 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Hepe05g0029 373 PRINTS Tyrosine kinase catalytic domain signature 287 309 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Hepe05g0029 373 PRINTS Tyrosine kinase catalytic domain signature 169 187 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Hepe05g0029 373 PRINTS Tyrosine kinase catalytic domain signature 243 265 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Hepe05g0029 373 ProSiteProfiles Protein kinase domain profile. 55 320 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Hepe05g0029 373 CDD STKc_MAP3K-like 61 316 - -
Hepe05g0029 373 Gene3D Phosphorylase Kinase; domain 1 43 134 - -
Hepe05g0029 373 SUPERFAMILY Protein kinase-like (PK-like) 54 332 IPR011009 -
Hepe05g0029 373 ProSitePatterns Protein kinases ATP-binding region signature. 61 82 IPR017441 GO:0005524(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Hepe02g3073 Hepe-Chr2:79888743 Hepe05g0029 Hepe-Chr5:289635 6.98e-145 dispersed
Hepe05g0029 Hepe-Chr5:289635 Hepe09g0241 Hepe-Chr9:2088187 6.01e-144 dispersed
Hepe04g1854 Hepe-Chr4:73514455 Hepe05g0029 Hepe-Chr5:289635 8.70e-66 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
72786 PF07714 PK_Tyr_Ser-Thr 3.20E-61 CL0016 Hepe PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hepe05g0029 - - - 0.0