Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Hepe05g0055 | ATGCAGATTCTTGCAGAAAAAACAGCTGATTGGAGCTTTAAATCATCCAATGAGAAAAGAAAATGGAAGAATCAACAATGGAGAATCTGTTCTTCATATCTCATTGCTCTGTTTTTTGCTCATTTTTTGGTATTTTCTCTTCAACCGGTCACTGGCCAGATGTGGGATGGAGTGGCTGTTACACAAGGAGATTTTCAAGCTCTTCAAGCTGTAAAAAATGAACTCATCGATCTAAAAGGAGCTTTAAATAGCTGGAATGGCAGTAATGGAGCTTGTTCCGGGCAGTGGGCAGGAATCAAATGTGTGATGGGGCAGGTCATTGCTATACAGCTTCCATGGAAGGCTCTCGCCGGCCGGATTTCCGATAGGATTGGGCAGCTCCGGGAGCTTCGGAAGCTCAGCCTCCATGACAATGTGATCTCCGGTGCTGTCCCTCGCTCGCTCGGGTACCTTCCAAATCTCAGAGGAATTTATCTTTTCAACAACAGATTTTCAGGTTCTATTCCCCCTACAATTGGTAATCTTCCACTTCTTCAAACTCTTGATTTGAGCAACAATTTGCTCACTGGAGAAATTCCTTCTGGTCTAGCTAATTCAACCAAATTGATTAGAGTTAATCTGAGTTACAATTCATTGTCGGGATCGATCCCAAGTAGCTTTACGCAGTCGTTTTCTCTTATAATTCTTGCCCTTCAGCATAATAATATTTCTGGGACTGTCCCAGAATTTTGGAGTGGTTCTGGAAACAGAACTTCCCCACTTGGGGTTTTAACCCTTGATCATAATGTTATATCTGGAGCAATTCCAGCTTCTTTGAGTAAATTGGAATGGCTTCAAGAGATTTCCATTAGTGAAAATAAGATCTCTGGGGCTATACCAGGTGAAATAGGCAGGCTGAAGAGGCTTCGCCTTTTGGATTTGTCGAACAACGCCATTAATGGCGGCTTCCCTTCGAGTTTCTCCAATCTCTCATCTCTTGAGTTATTGAATGTCGAAAACAATCGCCTTGAAAGCCAGATTCCAGGAGATATTGATAGGTTGCAGGATCTCTCAGTGGTCAAGCTTGGGAAGAATCGTTTTAGTGGGGAGATTCCTGCAAGTTTTGGGAACATTTCTGCTATTAGCCAACTTGATTTCTCAGAAAATAACTTCACGGGACAGATTCCAGCATCATTGACCCATTTGTTGAATCTAACATCTTTCAATGTCTCTTACAACAATCTCTCTGGCCCTGTCCCAATTCTCCTATCAAATAAGTTCAATTCGAGCTCTTTTGTTGGGAACCTTCAACTCTGTGGTTTTAGTACTTCAACTCCATGTCTACCTGCATCCTCCCCACAGAATATTACAACTCCATCAATCGAGGTCCCGAAACCGCACCACCGCCGCAGACTTAGTGTTAAGGACATAATTCTGATAGCGGCCGGAGCTCTGTTGGTGCTTCTACTTATTCTTTGTTCGATTCTGCTCTGTTGTTTGTTATCAAAAAGAGCTGCTGCCAAGAAGAATGACACGACGACGGCCAAGCAAGTTGCTGTCAGGAGCGTCGAGAAGGCAGCACCAGGCAGCACCGAAGTGGGGGCGGGTGAAGCCGGTGGAAAACTAGTTCATTATGATGGGCCATTTGTTTTCACTGCTGATGATCTTCTGTGTGCAACTGCGGAAATCATGGGCAAGAGCACATATGGAACAGCATACAAAGCAACATTAGAAGATGGCAATGAAGTTGCAGTGAAAAGATTGAGGGAAAAGACAACAAAGGGGCAGAAAGAATTTGAAACCGAAGTTGCAGGACTCGGAAAAATTCGACACCCAAATCTACTTGCTCTTAGAGCTTACTACTTAGGCCCCAAAGGAGAGAAGCTTCTTGTCTTTGACTACATGCCTAGAGGAAGCCTCTCATCCTTCCTTCATGCTCGTGGGCCGGAAACCTCAGTTGATTGGCTGACAAGGATGAAGATAGTGATCGGAATTACGCAGGGCTTGAACTACCTCCACACAGAAGAGAATCTAGTTCATGGAAACCTCACGTCGAGCAACATTCTGCTGGACGATCAGACCAATGCTCGTATTGCAGATTTCGGGCTTCCTAAGCTCATGACTTCAGCTGCAGCCACAAATGTGATTGCCACAGCAGGATCACAGGGCTACAATGCACCAGAGCTAACAAAAACCAAAAAGACCACAGCAAAGACAGATGTTTACAGCCTTGGAGTCATAATTTTGGAACTTTTGACAGGAAAATCTCCTGGAGAAGCCATGGAAGGAATGGATTTACCTCAGTGGGTGGCCTCAATTGTAAAGGAGGAGTGGACAAATGAAGTTTTTGATTTAGAGCTTATGAAAGATACACATACACCAAATATTGGTGATGAACTACTGAACACTCTGAAACTAGCCCTGCATTGTGTTGATCCCTCGCCAGCGGCACGGCCGGACGTCGAGCAAATTCTCCAGCAACTGGAGGAAATTAAGGCTTCTACTTCCGGTGAGGATGGCGCCAAAAATGAACAAGCAAATGAATAG | 2526 | 44.42 | MQILAEKTADWSFKSSNEKRKWKNQQWRICSSYLIALFFAHFLVFSLQPVTGQMWDGVAVTQGDFQALQAVKNELIDLKGALNSWNGSNGACSGQWAGIKCVMGQVIAIQLPWKALAGRISDRIGQLRELRKLSLHDNVISGAVPRSLGYLPNLRGIYLFNNRFSGSIPPTIGNLPLLQTLDLSNNLLTGEIPSGLANSTKLIRVNLSYNSLSGSIPSSFTQSFSLIILALQHNNISGTVPEFWSGSGNRTSPLGVLTLDHNVISGAIPASLSKLEWLQEISISENKISGAIPGEIGRLKRLRLLDLSNNAINGGFPSSFSNLSSLELLNVENNRLESQIPGDIDRLQDLSVVKLGKNRFSGEIPASFGNISAISQLDFSENNFTGQIPASLTHLLNLTSFNVSYNNLSGPVPILLSNKFNSSSFVGNLQLCGFSTSTPCLPASSPQNITTPSIEVPKPHHRRRLSVKDIILIAAGALLVLLLILCSILLCCLLSKRAAAKKNDTTTAKQVAVRSVEKAAPGSTEVGAGEAGGKLVHYDGPFVFTADDLLCATAEIMGKSTYGTAYKATLEDGNEVAVKRLREKTTKGQKEFETEVAGLGKIRHPNLLALRAYYLGPKGEKLLVFDYMPRGSLSSFLHARGPETSVDWLTRMKIVIGITQGLNYLHTEENLVHGNLTSSNILLDDQTNARIADFGLPKLMTSAAATNVIATAGSQGYNAPELTKTKKTTAKTDVYSLGVIILELLTGKSPGEAMEGMDLPQWVASIVKEEWTNEVFDLELMKDTHTPNIGDELLNTLKLALHCVDPSPAARPDVEQILQQLEEIKASTSGEDGAKNEQANE | 841 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
5 | 571051 | 573747 | + | Hsped.05g00550.1 | Hepe05g0055 | 569320 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Hepe05g0055 | 841 | FunFam | Leucine-rich repeat receptor-like serine/threonine-protein kinase BAM3 | 253 | 320 | - | - | |
Hepe05g0055 | 841 | Gene3D | Ribonuclease Inhibitor | 61 | 249 | IPR032675 | - | |
Hepe05g0055 | 841 | Gene3D | Ribonuclease Inhibitor | 250 | 335 | IPR032675 | - | |
Hepe05g0055 | 841 | SMART | LRR_typ_2 | 299 | 322 | IPR003591 | - | |
Hepe05g0055 | 841 | SMART | LRR_typ_2 | 175 | 199 | IPR003591 | - | |
Hepe05g0055 | 841 | SMART | LRR_typ_2 | 323 | 347 | IPR003591 | - | |
Hepe05g0055 | 841 | SMART | LRR_typ_2 | 151 | 174 | IPR003591 | - | |
Hepe05g0055 | 841 | SMART | LRR_typ_2 | 127 | 150 | IPR003591 | - | |
Hepe05g0055 | 841 | Pfam | Protein tyrosine and serine/threonine kinase | 555 | 821 | IPR001245 | GO:0004672(InterPro)|GO:0006468(InterPro) | |
Hepe05g0055 | 841 | PANTHER | LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE IMK3-RELATED | 265 | 828 | IPR052451 | - | |
Hepe05g0055 | 841 | Gene3D | Ribonuclease Inhibitor | 336 | 444 | IPR032675 | - | |
Hepe05g0055 | 841 | FunFam | Pollen receptor-like kinase 1 | 628 | 835 | - | - | |
Hepe05g0055 | 841 | CDD | STKc_IRAK | 557 | 824 | - | - | |
Hepe05g0055 | 841 | Gene3D | Transferase(Phosphotransferase) domain 1 | 629 | 840 | - | - | |
Hepe05g0055 | 841 | FunFam | LRR receptor-like serine/threonine-protein kinase FLS2 | 61 | 217 | - | - | |
Hepe05g0055 | 841 | FunFam | Leucine-rich repeat receptor-like protein kinase | 537 | 627 | - | - | |
Hepe05g0055 | 841 | Pfam | Leucine Rich Repeat | 153 | 175 | IPR001611 | GO:0005515(InterPro) | |
Hepe05g0055 | 841 | Pfam | Leucine Rich Repeat | 178 | 198 | IPR001611 | GO:0005515(InterPro) | |
Hepe05g0055 | 841 | Pfam | Leucine Rich Repeat | 202 | 221 | IPR001611 | GO:0005515(InterPro) | |
Hepe05g0055 | 841 | Pfam | Leucine Rich Repeat | 397 | 418 | IPR001611 | GO:0005515(InterPro) | |
Hepe05g0055 | 841 | Pfam | Leucine Rich Repeat | 376 | 395 | IPR001611 | GO:0005515(InterPro) | |
Hepe05g0055 | 841 | Pfam | Leucine rich repeat N-terminal domain | 63 | 101 | IPR013210 | - | |
Hepe05g0055 | 841 | Gene3D | Phosphorylase Kinase; domain 1 | 557 | 628 | - | - | |
Hepe05g0055 | 841 | MobiDBLite | consensus disorder prediction | 822 | 841 | - | - | |
Hepe05g0055 | 841 | FunFam | LRR receptor-like serine/threonine-protein kinase ERECTA | 321 | 440 | - | - | |
Hepe05g0055 | 841 | PRINTS | Leucine-rich repeat signature | 178 | 191 | - | - | |
Hepe05g0055 | 841 | PRINTS | Leucine-rich repeat signature | 299 | 312 | - | - | |
Hepe05g0055 | 841 | Pfam | Leucine rich repeat | 254 | 312 | IPR001611 | GO:0005515(InterPro) | |
Hepe05g0055 | 841 | SUPERFAMILY | Protein kinase-like (PK-like) | 555 | 825 | IPR011009 | - | |
Hepe05g0055 | 841 | ProSiteProfiles | Protein kinase domain profile. | 551 | 824 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
Hepe05g0055 | 841 | SUPERFAMILY | L domain-like | 85 | 432 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Hepe03g1264 | Hepe-Chr3:67892043 | Hepe05g0055 | Hepe-Chr5:571051 | 8.55e-70 | dispersed | |
Hepe05g0055 | Hepe-Chr5:571051 | Hepe08g0676 | Hepe-Chr8:6049883 | 2.74e-73 | dispersed | |
Hepe01g0674 | Hepe-Chr1:68953899 | Hepe05g0055 | Hepe-Chr5:571051 | 2.45e-172 | wgd | |
Hepe04g1879 | Hepe-Chr4:73725561 | Hepe05g0055 | Hepe-Chr5:571051 | 3.55e-42 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
72787 | PF07714 | PK_Tyr_Ser-Thr | 3.20E-40 | CL0016 | Hepe | PK |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Hepe05g0055 | - | - | - | 0.0 |