Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Hepe05g0067 ATGGACATGGAAATCGCCGATAATCTGAAATCCAAAGGAAATGAAGAACAATCGAAGCTCATAATGGTAATATTAATGGGCGCACCAGGAAGCGGCAAATCCACCTTCTGCGATCTCGTAATGGGCTCCTCTTCTCGCCCTTGGGTTCGAATCTGCCAGGATACCATTGGAAATGGCAAGTCTGGAACCAAAGCACAGTGCTTGAAGAGTGCAACCAGTGCATTGAATGATGGAAAAAGTGTATTTGTGGACAGGTGCAATCTTGAAGTAGAGCAGCGTGCAGATTTTGTGAAACTCGGTGGCCCTCGAGTGGATGTTCATGCTGTTGTATTGGATCTTCCGGCACAACTTTGTATTTCTCGTTCGGTTAAGCGGACTGGTCATGAAGGGAACTTATCAGGTGGAAAAGCTGCTGTTGTTGTGAATAGAATGCTGCAAAAGAAAGAGTTGCCTAAGCTAAATGAAGGGTTCACTCGCATAACGTTTTGCCACAATGAGACCGACGTTCAATCAGCTATAGATACGTACAAATCGCTCGGTTTACATGATATGCTCCCACATGGTTGTTTTGGACAGAAGAACCCAGACAAGAAAGTACAACTTGGCATAATGAGGTTCTTAAAGAAAGCAGAAAATCCGTCTAAGACGTGTTCGAGTGCCAATACCATTAAGGATTCACCAATTTCTCAAACTACCCAGAAAAAGAGCAACTCTTGTGATAAAAAGGAAGAGTCCGCCTGCACAATGTCGAGCAATGCTAGTAAAGAGTCAGAGAAAGGTGAAAATCCAGGAATTAGATCCTTAGAAGACAATATTTCACAAAGTGATCCTCCAACTCTTGCATTTCCATCTATTTCAACATCGGATTTCAAGTTTAGCCATGAAAAGGCTGCTGAAATTATCGTTGAGAAGGTTGAGGAATTCATGGATAAGCTTGGAAATGCCAGACTTGTGATGGTAGACTTGAGTCATGGATCAAAGATTTTGTCTTTGGTTAAAGCTAAAGCAGCTAAGAAAAATATTAGTTCCACCAAGTTTTTTACATTCGTAGGTGATATAACTAAACTCAATTCTGAAGGTGGATTGCGCTGCAATGTTATAGCCAATGCTGCAAACTGGCGACTGAAACCGGGAGGAGGTGGTGTCAATGCTGCAATTTTTAGTGTTGCAGGTCCTGATCTGGAAGTGGCAACTAAACAACAAGCGAACTCCCTTCGACCTGGCAATACCGTGGCCGTTCAATTGCCTTCAACTTCTCCTTTGTTTGATAGGGAAGGAGTAACCCATGTCATACATGTTCTTGGACCCAACATGAATCCACAAAGGCCAAATTATCTCAACAATGACTATGATGAAGGTTGCAAACTTCTTCGTGATGCTTACTCTTCCCTCTTTCAAGGCTTTATTTCAATAGTAGAAGACCAATTTAAGTCGGTGAAGGGAATTCACGAACGCCTCGGCTCGGTGCCTTCAGAACCGCAAAAGCACTCTGAGGAAAGCCATCACAAGTTTAAGAGAGAAGATTTGCAAAATCCTGAAAGAAGCAAAAAGTGGAAAGGATCTCAGGATTCAGCTGAAGCATTAAACCAAAACAACAATAAGACTGTCCACAAAACGAGTAAGCACTGGGGCTCATGGGCACAGGCACTTTACAACACGGCAATGCATCCCGAGAGACATGGTGATACCGTACTGGAGACATCAGATGATGTTGTAGTTCTGAATGATATTTATCCAAAAGCACGCAAGCATCTTCTAGTAGTGGCTCGGTATGAAGGCCTCAATCAACTAGCCGATGTACGTAAAGAACACCTTCCATTGTTGAGGTCAATGCACGATGTGGGTTTGAAGTGGATCGATAAGTTCTTTAACGAAGATGCATCATTGGTTTTTCGCCTCGGGTACCACTCGGCTCCATCCATGAGGCAACTGCACCTACATGTTATAAGCCAGGATTTCGACTCCAATCATTTGAAGAACAAGAAGCATTGGAATTCTTTCAACACTGATTTCTTCCGAGACTCGGTAGACGTGATGGACGAAGTGAGTAGCCATGGAAAGGCGAGCATCAAGGACGATGAGAGCTTGATGATGTCTATGGAGTTGCGGTGCCACAAATGCAGAAGTGCTCATCCCAACTTACCCAAATTGAAAACACATATTTCCAAATGCCAATCGCCTTTCCCTTCCACACTACTCGAGGGCGGCGGTCGTTTAGTGATAGCACCAACCAAGTAA 2238 43.57 MDMEIADNLKSKGNEEQSKLIMVILMGAPGSGKSTFCDLVMGSSSRPWVRICQDTIGNGKSGTKAQCLKSATSALNDGKSVFVDRCNLEVEQRADFVKLGGPRVDVHAVVLDLPAQLCISRSVKRTGHEGNLSGGKAAVVVNRMLQKKELPKLNEGFTRITFCHNETDVQSAIDTYKSLGLHDMLPHGCFGQKNPDKKVQLGIMRFLKKAENPSKTCSSANTIKDSPISQTTQKKSNSCDKKEESACTMSSNASKESEKGENPGIRSLEDNISQSDPPTLAFPSISTSDFKFSHEKAAEIIVEKVEEFMDKLGNARLVMVDLSHGSKILSLVKAKAAKKNISSTKFFTFVGDITKLNSEGGLRCNVIANAANWRLKPGGGGVNAAIFSVAGPDLEVATKQQANSLRPGNTVAVQLPSTSPLFDREGVTHVIHVLGPNMNPQRPNYLNNDYDEGCKLLRDAYSSLFQGFISIVEDQFKSVKGIHERLGSVPSEPQKHSEESHHKFKREDLQNPERSKKWKGSQDSAEALNQNNNKTVHKTSKHWGSWAQALYNTAMHPERHGDTVLETSDDVVVLNDIYPKARKHLLVVARYEGLNQLADVRKEHLPLLRSMHDVGLKWIDKFFNEDASLVFRLGYHSAPSMRQLHLHVISQDFDSNHLKNKKHWNSFNTDFFRDSVDVMDEVSSHGKASIKDDESLMMSMELRCHKCRSAHPNLPKLKTHISKCQSPFPSTLLEGGGRLVIAPTK 745
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 714660 718305 + Hsped.05g00670.1 Hepe05g0067 569332
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Hepe05g0067 745 Gene3D - 5 178 IPR027417 -
Hepe05g0067 745 ProSitePatterns HIT domain signature. 632 650 IPR019808 -
Hepe05g0067 745 Pfam C2HE / C2H2 / C2HC zinc-binding finger 668 723 IPR032566 -
Hepe05g0067 745 MobiDBLite consensus disorder prediction 485 539 - -
Hepe05g0067 745 MobiDBLite consensus disorder prediction 214 235 - -
Hepe05g0067 745 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 22 166 IPR027417 -
Hepe05g0067 745 Pfam Scavenger mRNA decapping enzyme C-term binding 551 663 - -
Hepe05g0067 745 SUPERFAMILY Macro domain-like 327 466 IPR043472 -
Hepe05g0067 745 SUPERFAMILY Macro domain-like 276 315 IPR043472 -
Hepe05g0067 745 FunFam aprataxin isoform X2 544 725 - -
Hepe05g0067 745 ProSiteProfiles Macro domain profile. 333 586 IPR002589 -
Hepe05g0067 745 MobiDBLite consensus disorder prediction 214 279 - -
Hepe05g0067 745 FunFam Transcription factor bHLH140 10 178 - -
Hepe05g0067 745 PANTHER APRATAXIN-RELATED 84 736 - GO:0000012(PANTHER)|GO:0003697(PANTHER)|GO:0003725(PANTHER)|GO:0005634(PANTHER)|GO:0030983(PANTHER)|GO:0033699(PANTHER)|GO:1990165(PANTHER)
Hepe05g0067 745 FunFam Transcription factor bHLH140 326 473 - -
Hepe05g0067 745 MobiDBLite consensus disorder prediction 243 258 - -
Hepe05g0067 745 Gene3D Leucine Aminopeptidase, subunit E, domain 1 189 325 IPR043472 -
Hepe05g0067 745 Pfam AAA domain 22 146 - -
Hepe05g0067 745 Gene3D Leucine Aminopeptidase, subunit E, domain 1 326 479 IPR043472 -
Hepe05g0067 745 MobiDBLite consensus disorder prediction 489 521 - -
Hepe05g0067 745 Gene3D - 540 724 IPR036265 -
Hepe05g0067 745 SUPERFAMILY HIT-like 533 707 IPR036265 -
Hepe05g0067 745 MobiDBLite consensus disorder prediction 522 539 - -
Hepe05g0067 745 Pfam Macro domain 369 453 IPR002589 -
Hepe05g0067 745 ProSiteProfiles HIT domain profile. 550 658 IPR011146 GO:0003824(InterPro)
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hepe05g0067 K10863 - csv:101216867 1285.4