Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Hepe05g0083 ATGGAAGGCCACCATCCTCATCCCCTTATTCATCAGCTCCACCACCAGCAACAGCTTCAACATCCTCCTCCGCCGCATCTCCACCAGAGCCTCGCCGATCAAACCGCCGCCTCCGCCGCCGGCGACAGATTCCCTCAATGGAGTATTCAAGAAACAAAGGAGTTTTTGATGATCAGAGCCGAGCTGGATCAGAATTTCATGGAGACCAAAAGAAACAAACAGTTGTGGGAAATCATCGCCTCCAAAATGAAGGAAAATGGTTTCAATCGCAGCGCTGAACAGTGTAAATGCAAATGGAAAAACCTCGTTACCCGTTATAAGGGTTGTGAAACAATGGAGCCAGAAATTTCAAGGCAACAATTTCCATTCTACACAGAACTCCAAGCAATTTTCGGAGCAAGAATGCAAAGGATATTATGGGCGGAGGCGGAGAGCGGCGGGAGCGGATCGAGGAAGAAGACGATGGCATTATCCTCCTCCTCCGACGAAGAAAACGAAGATAGCAACGGGGGCGACACGAAAGTTAGCAATAGGAAGAGGAAGAAGGTTATTAAAGGCACGAGCGGGGGCAACGGCAACGGCAACGGCGGCGGAAGCAGTAGTACGAATCACTTGAAAGAAATATTGGAGAATTTTATGAATCAACAAATGCAAATGGAAGTGCAATGGAGGGAAGCATTTGAAGCAAGGGAAAAAGAGAGGCAAATTAGGGAAATGGAGTGGAGAAAGAACATGGAAGCTTTAGAACATGAGAGGATAATGTTGGAAAGAAGGTGGAGAGAAAGAGAAGAACAAAGAAGAATGAGAGAAGAAGTTAGGGCTGAGAAAAGAGATGCTTTAATCACAACTTTGTTAAACAAACTCAGAAGAGATGATCATCATATGTAG 888 45.83 MEGHHPHPLIHQLHHQQQLQHPPPPHLHQSLADQTAASAAGDRFPQWSIQETKEFLMIRAELDQNFMETKRNKQLWEIIASKMKENGFNRSAEQCKCKWKNLVTRYKGCETMEPEISRQQFPFYTELQAIFGARMQRILWAEAESGGSGSRKKTMALSSSSDEENEDSNGGDTKVSNRKRKKVIKGTSGGNGNGNGGGSSSTNHLKEILENFMNQQMQMEVQWREAFEAREKERQIREMEWRKNMEALEHERIMLERRWREREEQRRMREEVRAEKRDALITTLLNKLRRDDHHM 295
       

Gff information


Chromosome Start End Strand Old_gene Gene Num
5 842617 844113 - Hsped.05g00830.1 Hepe05g0083 569348
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Hepe05g0083 295 SMART sant 43 105 IPR001005 -
Hepe05g0083 295 PANTHER FI21293P1 21 290 - -
Hepe05g0083 295 FunFam Zinc finger and SCAN domain-containing 20 47 108 - -
Hepe05g0083 295 Coils Coil 238 265 - -
Hepe05g0083 295 ProSiteProfiles Myb-like domain profile. 47 103 IPR001005 -
Hepe05g0083 295 Pfam Myb/SANT-like DNA-binding domain 46 130 IPR044822 -
Hepe05g0083 295 MobiDBLite consensus disorder prediction 188 203 - -
Hepe05g0083 295 MobiDBLite consensus disorder prediction 1 29 - -
Hepe05g0083 295 Gene3D - 47 108 - -
Hepe05g0083 295 MobiDBLite consensus disorder prediction 144 203 - -
Hepe05g0083 295 CDD GT1 45 110 - -
       

Duplication type information


Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Hepe07g0838 Hepe-Chr7:10588517 Hepe05g0083 Hepe-Chr5:842617 6.16e-26 transposed
Hepe04g0748 Hepe-Chr4:61425754 Hepe05g0083 Hepe-Chr5:842617 7.46e-52 wgd
       

Transcription factors information


Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
55535 PF13837 Myb_DNA-bind_4 7.70E-20 CL0123 Hepe TF
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hepe05g0083 - - - 0.0