Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Hepe05g0083 | ATGGAAGGCCACCATCCTCATCCCCTTATTCATCAGCTCCACCACCAGCAACAGCTTCAACATCCTCCTCCGCCGCATCTCCACCAGAGCCTCGCCGATCAAACCGCCGCCTCCGCCGCCGGCGACAGATTCCCTCAATGGAGTATTCAAGAAACAAAGGAGTTTTTGATGATCAGAGCCGAGCTGGATCAGAATTTCATGGAGACCAAAAGAAACAAACAGTTGTGGGAAATCATCGCCTCCAAAATGAAGGAAAATGGTTTCAATCGCAGCGCTGAACAGTGTAAATGCAAATGGAAAAACCTCGTTACCCGTTATAAGGGTTGTGAAACAATGGAGCCAGAAATTTCAAGGCAACAATTTCCATTCTACACAGAACTCCAAGCAATTTTCGGAGCAAGAATGCAAAGGATATTATGGGCGGAGGCGGAGAGCGGCGGGAGCGGATCGAGGAAGAAGACGATGGCATTATCCTCCTCCTCCGACGAAGAAAACGAAGATAGCAACGGGGGCGACACGAAAGTTAGCAATAGGAAGAGGAAGAAGGTTATTAAAGGCACGAGCGGGGGCAACGGCAACGGCAACGGCGGCGGAAGCAGTAGTACGAATCACTTGAAAGAAATATTGGAGAATTTTATGAATCAACAAATGCAAATGGAAGTGCAATGGAGGGAAGCATTTGAAGCAAGGGAAAAAGAGAGGCAAATTAGGGAAATGGAGTGGAGAAAGAACATGGAAGCTTTAGAACATGAGAGGATAATGTTGGAAAGAAGGTGGAGAGAAAGAGAAGAACAAAGAAGAATGAGAGAAGAAGTTAGGGCTGAGAAAAGAGATGCTTTAATCACAACTTTGTTAAACAAACTCAGAAGAGATGATCATCATATGTAG | 888 | 45.83 | MEGHHPHPLIHQLHHQQQLQHPPPPHLHQSLADQTAASAAGDRFPQWSIQETKEFLMIRAELDQNFMETKRNKQLWEIIASKMKENGFNRSAEQCKCKWKNLVTRYKGCETMEPEISRQQFPFYTELQAIFGARMQRILWAEAESGGSGSRKKTMALSSSSDEENEDSNGGDTKVSNRKRKKVIKGTSGGNGNGNGGGSSSTNHLKEILENFMNQQMQMEVQWREAFEAREKERQIREMEWRKNMEALEHERIMLERRWREREEQRRMREEVRAEKRDALITTLLNKLRRDDHHM | 295 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 5 | 842617 | 844113 | - | Hsped.05g00830.1 | Hepe05g0083 | 569348 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Hepe05g0083 | 295 | SMART | sant | 43 | 105 | IPR001005 | - | |
| Hepe05g0083 | 295 | PANTHER | FI21293P1 | 21 | 290 | - | - | |
| Hepe05g0083 | 295 | FunFam | Zinc finger and SCAN domain-containing 20 | 47 | 108 | - | - | |
| Hepe05g0083 | 295 | Coils | Coil | 238 | 265 | - | - | |
| Hepe05g0083 | 295 | ProSiteProfiles | Myb-like domain profile. | 47 | 103 | IPR001005 | - | |
| Hepe05g0083 | 295 | Pfam | Myb/SANT-like DNA-binding domain | 46 | 130 | IPR044822 | - | |
| Hepe05g0083 | 295 | MobiDBLite | consensus disorder prediction | 188 | 203 | - | - | |
| Hepe05g0083 | 295 | MobiDBLite | consensus disorder prediction | 1 | 29 | - | - | |
| Hepe05g0083 | 295 | Gene3D | - | 47 | 108 | - | - | |
| Hepe05g0083 | 295 | MobiDBLite | consensus disorder prediction | 144 | 203 | - | - | |
| Hepe05g0083 | 295 | CDD | GT1 | 45 | 110 | - | - |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Hepe07g0838 | Hepe-Chr7:10588517 | Hepe05g0083 | Hepe-Chr5:842617 | 6.16e-26 | transposed | |
| Hepe04g0748 | Hepe-Chr4:61425754 | Hepe05g0083 | Hepe-Chr5:842617 | 7.46e-52 | wgd |
Transcription factors information
| Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
|---|---|---|---|---|---|---|---|
| 55535 | PF13837 | Myb_DNA-bind_4 | 7.70E-20 | CL0123 | Hepe | TF |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Hepe05g0083 | - | - | - | 0.0 |