Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Hepe05g0092 ATGGATTTCGAAGAAGGACCGTCGATCTTGCAAAACGGCGCCGTCAAGGGTTCGCTGAGGCACGATCGGACGGCTCGCAGCATGTCGTCGTCATCGTTGCGCCAAAAGTCCGATTTGACCCTAGTTTCCAAGGTTCGTTTCGGTTGGCTTAGGCTGTTGCTTGTGAATCTTCAGGAGGTTATTTTTGGGACCAGGATTTGGATTCTTTTTCCGGCGATTCCGTTGGCTGTTTTGGCCGACTCTTTTGGCTTCCGACGACCATGGGTTTTCGTTCTTAGCTTACTGGGCCTTGCTCCACTTGCTGAACGCCTCAGCTTTCTGACCGAGCAAATCTCATACTTCACTGGCCCCGCAGTTGGTGGATTAGTAAATGCGACATGTGGCAATGCGACAGAGCTAATCATAGCTATCTTTGCACTTGGTAAGAATAAGATTGAGTTGGTGAAGTATTCTCTATTGGGATCCATTCTTTCAAATCTTCTTCTTGTTCTTGGAACCTCACTCTTCTTTGGTGGCATCCTCAATCTTAAGAAAGAACAAACCTATGACCAAAGACGAGCTGAGGTGAACTCGCACATGTTGTTGTTGGCGCTTTTATGCCATTCGCTTCCGATGTTATTCCCATACGCCGGAGGATCGGCTGACGTGGCCAGAGCCGGAGCGCTGCGATTGTCTAGAGCCGGTAGTATAGTAATGTTTGTAGCTTATGTCGCTTACTTGATCTTTCAGCTTTGGACTCATTGCCGATTATTTGAGCCAGACAAGGAACTGGACGTATACGACGACGTAGTGGAAGAAGCTCCGGTGATCGGAATATGGAGCGCCACGGCGTGGTTGGTGGGTTTTACCGTTCTCATTGCTTTGTTGTCTAAATACGCGGTGGCCACAATCGAGGATGCATCAGAAACTTGGGGTTTATCAGTTGCATTCCTTAGCATAATCTTGCTCCCACTGGTTGGAAATGCAGCTGAGCATGCAGGAGCAGTCATATTTGCTTATAAGAACAAGTTGGTTCCTTTGTGTGTAATTGTTGCTTGGGTTATGGGAATGAATATGGATCTTAATTTTAATATCCTTGAAACTGCCTCCCTTGCACTTTCAATAATAGCTTCATCATCCATTTTGCAGGATCCATTTGATTCGGGCCGACACAGAACCAAAACTGGGCCAAAGCCCAACAAGCTTCCGGACGTACGCCGTCAACAAAAATATCTTCCTGCCAAATGGGATTCATTTCCTTCGGTCAATTGGTTCTCAACTTTTCCAAGTCTCTGGTTAGTGGTTATTCTGAGCCATTCCGATTTAGTTCTGTTCAGAACCATGCCGGAAGAAAAGATACCAGCAATTGTATGGCGGAATATCGGAAATCTTGAAGCCTCTGATCGTCGGAGCTTCAACACTACGGACTGTGAACCACTGTGGAACAGCAACAAGCGATTTGGCTGCAGTGGTGGTAGTGATGGTGATGGCAGTCGTTGTAAATTTGCCTGCATTACTGTTGTACAAAAGAGAAACCGGAAGGAGTTTGCTCCGACGCCGGCTCAGCTGCTCAAGCATCCATTATCAATTCTAGCTTTGGTGCACAGAGAAGCAACGCTCTTCGTCGCTGGCGCCATATCGGGAGTTGCCGCTAAGACTGCGACAGCTCCGCTAGAGCGAATCAAGCTTCTTATGCAGACTCAAGGAACAAGAATTGCGCAAGAAGGAGCTAAGAAGTCTATTGGTTTTATCGAGGCAATAACAGCCATAATAAGGGTGGAAGGAATTAGAGGGCTTTGGAAAGGAAACCTTCCTCAGGTTATACGCATCATACCGTATAGTGCTATCCAACTCTTTGCCTATGAAAATTATAAGAACTTTTTCAGGGGAGAAGATGGTGAACTTTCGTTGATTGGAAGATTAGCTGCTGGTGCTTGTGCTGGCATGACATCCACCTTCATGACATATCCGTTAGATGTTTTGAGGTTACGCATGGCAGTTGACCCAGGGTTTCGAACTGCATCTGAGATTGCCTCAAGTATGCTACGAGAGGAAGGAATTACATCCTACTTCAGTGGTCTTGGACCATCGCTTTTTGGCATAGCTCCTTACGTTGCCGTGAACTTTTGCATTTTTGATTTGGTAAAAAAATATTTTCCAGAGGAAACTCAAAGGAGAACTGAAACATCTTTATTCACAGCCTTGCTCTCGGCTTCCCTAGCCACACTCATGTGCTATCCTTTGGACACCGTGAGAAGACAAATGCAAATGAAGGGTACACCTTACACGACAGTTTTCGATGCTTTTGCAGGTATATGGGCTAGTGATGGATTTATTGGATTTTACAGGGGTTTACTGCCCAACTTCCTGAAGAATTTACCAAGCAGCGGCATCAAGCTTACCACATATGACTTTGTCAAGCGTCTTATTGAAACCAGTGAAAACGAGTATCTGAAAATCATGGAGGAAAATCGTGAAAAGCATAACCAGAGAATTCAGTGA 2481 45.71 MDFEEGPSILQNGAVKGSLRHDRTARSMSSSSLRQKSDLTLVSKVRFGWLRLLLVNLQEVIFGTRIWILFPAIPLAVLADSFGFRRPWVFVLSLLGLAPLAERLSFLTEQISYFTGPAVGGLVNATCGNATELIIAIFALGKNKIELVKYSLLGSILSNLLLVLGTSLFFGGILNLKKEQTYDQRRAEVNSHMLLLALLCHSLPMLFPYAGGSADVARAGALRLSRAGSIVMFVAYVAYLIFQLWTHCRLFEPDKELDVYDDVVEEAPVIGIWSATAWLVGFTVLIALLSKYAVATIEDASETWGLSVAFLSIILLPLVGNAAEHAGAVIFAYKNKLVPLCVIVAWVMGMNMDLNFNILETASLALSIIASSSILQDPFDSGRHRTKTGPKPNKLPDVRRQQKYLPAKWDSFPSVNWFSTFPSLWLVVILSHSDLVLFRTMPEEKIPAIVWRNIGNLEASDRRSFNTTDCEPLWNSNKRFGCSGGSDGDGSRCKFACITVVQKRNRKEFAPTPAQLLKHPLSILALVHREATLFVAGAISGVAAKTATAPLERIKLLMQTQGTRIAQEGAKKSIGFIEAITAIIRVEGIRGLWKGNLPQVIRIIPYSAIQLFAYENYKNFFRGEDGELSLIGRLAAGACAGMTSTFMTYPLDVLRLRMAVDPGFRTASEIASSMLREEGITSYFSGLGPSLFGIAPYVAVNFCIFDLVKKYFPEETQRRTETSLFTALLSASLATLMCYPLDTVRRQMQMKGTPYTTVFDAFAGIWASDGFIGFYRGLLPNFLKNLPSSGIKLTTYDFVKRLIETSENEYLKIMEENREKHNQRIQ 826
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 989793 1005734 + Hsped.05g00920.1 Hepe05g0092 569357
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Hepe05g0092 826 SUPERFAMILY Mitochondrial carrier 532 799 IPR023395 -
Hepe05g0092 826 ProSiteProfiles Solute carrier (Solcar) repeat profile. 528 620 IPR018108 -
Hepe05g0092 826 Pfam Mitochondrial carrier protein 533 623 IPR018108 -
Hepe05g0092 826 Pfam Mitochondrial carrier protein 628 714 IPR018108 -
Hepe05g0092 826 Pfam Mitochondrial carrier protein 723 805 IPR018108 -
Hepe05g0092 826 ProSiteProfiles Solute carrier (Solcar) repeat profile. 718 802 IPR018108 -
Hepe05g0092 826 NCBIfam calcium/proton exchanger 71 337 IPR004798 GO:0006816(InterPro)|GO:0015369(InterPro)
Hepe05g0092 826 Gene3D - 117 387 IPR044880 -
Hepe05g0092 826 ProSiteProfiles Solute carrier (Solcar) repeat profile. 628 711 IPR018108 -
Hepe05g0092 826 Pfam Sodium/calcium exchanger protein 88 245 IPR004837 GO:0016020(InterPro)|GO:0055085(InterPro)
Hepe05g0092 826 Pfam Sodium/calcium exchanger protein 275 336 IPR004837 GO:0016020(InterPro)|GO:0055085(InterPro)
Hepe05g0092 826 PANTHER VACUOLAR CALCIUM ION TRANSPORTER 22 615 IPR004713 GO:0006812(InterPro)|GO:0006874(PANTHER)|GO:0008324(InterPro)|GO:0009705(PANTHER)|GO:0015369(PANTHER)|GO:0016020(InterPro)|GO:0070588(PANTHER)
Hepe05g0092 826 FunFam Envelope ADP,ATP carrier protein 530 808 - -
Hepe05g0092 826 PRINTS Mitochondrial carrier protein signature 727 749 IPR002067 GO:0055085(InterPro)
Hepe05g0092 826 PRINTS Mitochondrial carrier protein signature 533 546 IPR002067 GO:0055085(InterPro)
Hepe05g0092 826 PRINTS Mitochondrial carrier protein signature 643 661 IPR002067 GO:0055085(InterPro)
Hepe05g0092 826 PRINTS Mitochondrial carrier protein signature 595 615 IPR002067 GO:0055085(InterPro)
Hepe05g0092 826 PRINTS Mitochondrial carrier protein signature 684 702 IPR002067 GO:0055085(InterPro)
Hepe05g0092 826 PRINTS Mitochondrial carrier protein signature 546 560 IPR002067 GO:0055085(InterPro)
Hepe05g0092 826 Gene3D Mitochondrial carrier domain 528 807 IPR023395 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Hepe01g0765 Hepe-Chr1:71101134 Hepe05g0092 Hepe-Chr5:989793 2.69e-30 dispersed
Hepe03g0110 Hepe-Chr3:1347165 Hepe05g0092 Hepe-Chr5:989793 2.47e-34 dispersed
Hepe04g0818 Hepe-Chr4:62320335 Hepe05g0092 Hepe-Chr5:989793 5.05e-42 dispersed
Hepe05g0092 Hepe-Chr5:989793 Hepe06g0649 Hepe-Chr6:49068851 7.48e-85 dispersed
Hepe03g1739 Hepe-Chr3:74277313 Hepe05g0092 Hepe-Chr5:989793 2.66e-27 transposed
Hepe04g0754 Hepe-Chr4:61548704 Hepe05g0092 Hepe-Chr5:989793 1.78e-86 transposed
Hepe04g1378 Hepe-Chr4:69455331 Hepe05g0092 Hepe-Chr5:989793 3.32e-28 transposed
Hepe10g1763 Hepe-Chr10:54404216 Hepe05g0092 Hepe-Chr5:989793 1.52e-14 transposed
Hepe10g1320 Hepe-Chr10:49113599 Hepe05g0092 Hepe-Chr5:989793 4.08e-97 wgd
Hepe04g0753 Hepe-Chr4:61536010 Hepe05g0092 Hepe-Chr5:989793 5.35e-161 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hepe05g0092 K14684 - csv:101213421 647.121