Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Hepe05g0096 ATGGCTTCTTGTTGCTTTGCGATCCTGAATTGCTGTAAAGGAAATAGCAGCTCCGAGGAACCGGCAGAAGGGATTGCTGTTACCAACAATGTACGCATCTTTTCTTATAATTCACTGAGGTCAGCTACTAGAAATTTTCATCCATCAAGCAGAATAGGTGCTGGAGGTTATGGAGTTGTCTACAAAGGAGTTTTAAGGGATGGTACCAATGTTGCAATCAAATCACTGTCTGCAGAATCAGCTCAGGGAACTCGTGAATTTTTAACCGAGATAAATATGATATCAAATATAAGACATCAAAATCTCGTTGAACTGATTGGTTGTTGCGTTGAAGGCACACATCGAATTTTGGTGTATGAATACCTGGAGAACAACAGCCTCGCAAGTACTTTGCTTGGTACAATGAGTAAGCACGTCATTCTGGATTGGTCAAAGAGAGCTAAGATTTGTCTTGGTACGGCTCTTGGTCTTGCATTTCTACATGAGGAAGCAGAACCGTCTGTTGTTCATAGAGATATCAAGGCTAGCAATATACTTCTTGACAGAAACTTTCATCCTAAAATAGGAGACTTTGGGTTGGCTAAACTTTTCCCAGACAACGTTACTCATGTTAGCACTCGAGTGGCCGGAACTGTTGGATATTTGGCCCCTGAATATGCACTTTTAGGACAGCTGACGAAGAAGGCAGATGTATACAGTTTTGGTGTGCTCATGCTGGAAGTAATTAGTGGAAATAGCAGCAGTAAAGCAGCATTCGGAGATGAATTGTCGATTCTCGTGGAATGGACTTGGAAATTAAAACAAGAAGGACGGCTCGTAGAACTCATTAATCCGGAACTGATCGAATATCCAAAAGCCGAGGTGCTGCGTTTCATCACAGTTGCACTCTTCTGTACCCAAGCAGCTGCAAATCAAAGGCCAACAATGAAGCAGGTTGTGGAAATGCTTTCAAGAGAAGTACACCTTAATGAAAAGCTATTGACAGAGCCAGGAGTATACAAAGGACACAAAACTAGGAAGTTAAATAGTGGTGGTGCTAGTTCAGAGGGATCATCATCCTCCCATAGAGACAAAGGTAAGAAAGCTATGAAGTCTTGTACATCTTCACCACAATTTAATAGCTCAAACAGTCTCACTCAAATGCTTCCTAGGTGA 1155 41.82 MASCCFAILNCCKGNSSSEEPAEGIAVTNNVRIFSYNSLRSATRNFHPSSRIGAGGYGVVYKGVLRDGTNVAIKSLSAESAQGTREFLTEINMISNIRHQNLVELIGCCVEGTHRILVYEYLENNSLASTLLGTMSKHVILDWSKRAKICLGTALGLAFLHEEAEPSVVHRDIKASNILLDRNFHPKIGDFGLAKLFPDNVTHVSTRVAGTVGYLAPEYALLGQLTKKADVYSFGVLMLEVISGNSSSKAAFGDELSILVEWTWKLKQEGRLVELINPELIEYPKAEVLRFITVALFCTQAAANQRPTMKQVVEMLSREVHLNEKLLTEPGVYKGHKTRKLNSGGASSEGSSSSHRDKGKKAMKSCTSSPQFNSSNSLTQMLPR 384
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 1032716 1037645 + Hsped.05g00960.1 Hepe05g0096 569361
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Hepe05g0096 384 Pfam Protein tyrosine and serine/threonine kinase 50 316 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Hepe05g0096 384 ProSiteProfiles Protein kinase domain profile. 46 322 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Hepe05g0096 384 MobiDBLite consensus disorder prediction 364 384 - -
Hepe05g0096 384 FunFam Putative LRR receptor-like serine/threonine-protein kinase 122 328 - -
Hepe05g0096 384 Gene3D Phosphorylase Kinase; domain 1 16 121 - -
Hepe05g0096 384 CDD STKc_IRAK 52 318 - -
Hepe05g0096 384 ProSitePatterns Serine/Threonine protein kinases active-site signature. 168 180 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Hepe05g0096 384 FunFam cold-responsive protein kinase 1 16 121 - -
Hepe05g0096 384 ProSitePatterns Protein kinases ATP-binding region signature. 52 74 IPR017441 GO:0005524(InterPro)
Hepe05g0096 384 MobiDBLite consensus disorder prediction 333 384 - -
Hepe05g0096 384 SMART serkin_6 46 316 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Hepe05g0096 384 Gene3D Transferase(Phosphotransferase) domain 1 122 329 - -
Hepe05g0096 384 SUPERFAMILY Protein kinase-like (PK-like) 25 316 IPR011009 -
Hepe05g0096 384 PANTHER CYSTEINE-RICH RECEPTOR-LIKE PROTEIN KINASE 3 20 354 IPR052059 GO:0004674(PANTHER)|GO:0006468(PANTHER)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Hepe05g0096 Hepe-Chr5:1032716 Hepe07g1930 Hepe-Chr7:63081193 9.63e-143 dispersed
Hepe03g1963 Hepe-Chr3:76764967 Hepe05g0096 Hepe-Chr5:1032716 2.35e-84 transposed
Hepe04g1924 Hepe-Chr4:74179406 Hepe05g0096 Hepe-Chr5:1032716 3.25e-70 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
72790 PF00069 Pkinase 2.10E-46 CL0016 Hepe PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hepe05g0096 - - - 0.0