Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Hepe05g0126 ATGGCGCCTCCGGAAGTTTCTCAGTCCGACATTGATTTGGAGCAGCAGGGGAATCAAACCCATCGGCAGTCTGTTAGCGGTAGTGATTTGAGCGCCGATTGCAGTGTCTATTTCTCCGACGCCGACGAGGGTTCGTGTTATTCTCAGTTTTTTTCGACCAATGGTGGTTCTTACGATGAGTATAGGTTTGCTTTCGTTTCTCAGCCGGAGGTTGTTTTGGATTCTCGCCGTGTTTCATCGGTTTCGGATCGTTCTGTGGAGGTTGAGAATGAGAATGGGATTACTGAAATTAAGGTGCATTTGGCTAAAGTAGAGAGGGATTGCAGGATTTGTCATTTGGGTTTGGAGAGTAATAGCCAAGAATCTGGAATCCCAATCGAATTGGGTTGTTCGTGCAAGGATGATTTGGCTGCTGCTCATAAGCATTGTGCTGAAACCTGGTTTAAAATTAAAGGAAACAAGACGTGTGAGATTTGCCATTCCGTTGCACGAAACATTCTCGGACCAAATGAGGTTGAATCAACAGAGCAATCTAATGAATCCAACAACGCCTCCTCGACAACTGCAGTTGCTGCATCAATTCCCTCATCAGACACCCAAAGCTTCTGGCGTGGCCACCGGTTTCTGAACTTTCTACTTGCCTGTATGGTATTCGCTTTTGTTATATCTTGGCTCTTTCACTTCAACGTGCCCTCGTAA 699 45.92 MAPPEVSQSDIDLEQQGNQTHRQSVSGSDLSADCSVYFSDADEGSCYSQFFSTNGGSYDEYRFAFVSQPEVVLDSRRVSSVSDRSVEVENENGITEIKVHLAKVERDCRICHLGLESNSQESGIPIELGCSCKDDLAAAHKHCAETWFKIKGNKTCEICHSVARNILGPNEVESTEQSNESNNASSTTAVAASIPSSDTQSFWRGHRFLNFLLACMVFAFVISWLFHFNVPS 232
       

Gff information


Chromosome Start End Strand Old_gene Gene Num
5 1475258 1478192 + Hsped.05g01260.1 Hepe05g0126 569391
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Hepe05g0126 232 MobiDBLite consensus disorder prediction 170 190 - -
Hepe05g0126 232 SUPERFAMILY RING/U-box 105 163 - -
Hepe05g0126 232 ProSiteProfiles Zinc finger RING-CH-type profile. 100 166 IPR011016 GO:0008270(InterPro)
Hepe05g0126 232 MobiDBLite consensus disorder prediction 1 27 - -
Hepe05g0126 232 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 95 168 IPR013083 -
Hepe05g0126 232 SMART ringv_2 107 160 IPR011016 GO:0008270(InterPro)
Hepe05g0126 232 PANTHER ZINC FINGER, RING-CH-TYPE 21 231 - -
Hepe05g0126 232 CDD RING_CH-C4HC3_MARCH 108 160 - -
Hepe05g0126 232 MobiDBLite consensus disorder prediction 9 27 - -
Hepe05g0126 232 Pfam RING-variant domain 108 159 IPR011016 GO:0008270(InterPro)
       

Duplication type information


Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Hepe04g0085 Hepe-Chr4:28273600 Hepe05g0126 Hepe-Chr5:1475258 1.07e-08 dispersed
Hepe04g1925 Hepe-Chr4:74186486 Hepe05g0126 Hepe-Chr5:1475258 2.13e-24 dispersed
Hepe10g1294 Hepe-Chr10:48716842 Hepe05g0126 Hepe-Chr5:1475258 2.21e-43 wgd
Hepe02g3339 Hepe-Chr2:82988698 Hepe05g0126 Hepe-Chr5:1475258 1.49e-78 wgd
Hepe04g0791 Hepe-Chr4:61956364 Hepe05g0126 Hepe-Chr5:1475258 8.85e-66 wgd
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hepe05g0126 - - - 0.0