Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Hepe05g0137 | ATGGGTGATTCTGGAATTGAATCCTACGACCATGTCCCTCAACAAAGCCGCCGTGACAAGCTCCGGGAACACCAATCCGCCGCCGACCGTTCTAATTTCTTCCCTTTTTACGATCCCTCTTTAATCCTCAATTCCAATAATAATAATAACAACAACAATCCAGTCTTCTCACAATTCCTCACCCACCACCACCCATTTTTCGACCCTCAAATCCAACAATCAGAATCCAACAATAACCCTCTTCTTCTAAATCATTGCACGGCGGCGGCGGCGGCGGCGGCAGCCTATGCCCCTGCTGCCCCCGGTGGCTTCAAGCCATCTCCTCTCTCGCTCTCGCTCTCCTCACAACCCTATAATCTTCTCACCAACGGCGGCAAAGCAGCTAGCTTGGTGGTCCCTCTTGGACCTTTCACTGGCTATGCTTCCATTTTGAAAGGCTCGACGTTTTTGAAACCTGCTCAGCAGTTGTTAGAAGATCTTTGTCAAGCGATTCAGCCTTCTTCTTCTTCTAATTCTGATTCTGATAGCTTGAGTGATTCTGGAATTGTTGATCATCATCATCATCATCAACTTCCACTTCCTTCTGCTGGAGATGTTGCTCATAAATCCACCCTTGTTTCTATGCTTGATGAGGTTTACAGAAAATATAAGCAATACTATCAACAGATCCAGGAAGTAATGACATCGTTTGAGTACATCTCGGGCCTCGGGAATGCGGCGCCCTATGCCAATCAGGCTATAAAAGCCATGTACAAGCATTTCAAGTGCTTGAAAAATGCAATTCTAGATCAACTTCAATTCAATAAAAAGACTCATGGTGACTACTCTCAACGATCCGTTCAGAACTCGGGATTTCTCGACCATCAGCCTGTTTGGCGACCACAACGCGGGCTTCCCGAACGAGCAGTGACTGTTCTCCGTGCTTGGTTGTTCGAACATTTTTTGCATCCTTATCCTTCTGATACAGACAAGCTTATGTTGGCAAAACAGACTGGTCTGTCTCGTAGTCAGGTATCTAACTGGTTCATCAATGCAAGAGTGAGGCTTTGGAAGCCAATGGTTGAAGAAATATACATGCTTGAAACTAAGCAAACTCACAAAAATTTGCATAGAGAAGATCGAAACGCCATTCAGGCGAATGATCATCATCCATCAAACTCGCTCGCAATGGATAACCCCTCAACATCCTCTCAACAAATTCAAGATACTCCTCCCAAACGCATCCGAAACGAACTTCATCATGACATGCCTATGGGACATCAAGACGAGCACTTGAACGTATCATACAACTTGTCGAGCCATCCCCATGTTGGCCTAAACGCAAACATGGCGGGGGGAAACAACGGTGGAGTTTCCTTAACTCTTGGTCTTCACCAGAACAATGGCATTGGTGCCTTTTCAGAACCCTTCCCTGTCGGGTTCCCCGTAGCTTCCACTCGTCGTTTCGGGCTTGGGATCCAAGCCAACAACGATGGGTACGTAATGGGTGGACATTTTGGGAGAGATGTTCTTGGAGGTCAGCTTTTACATGACTTTGTAGGCTGA | 1545 | 46.41 | MGDSGIESYDHVPQQSRRDKLREHQSAADRSNFFPFYDPSLILNSNNNNNNNNPVFSQFLTHHHPFFDPQIQQSESNNNPLLLNHCTAAAAAAAAYAPAAPGGFKPSPLSLSLSSQPYNLLTNGGKAASLVVPLGPFTGYASILKGSTFLKPAQQLLEDLCQAIQPSSSSNSDSDSLSDSGIVDHHHHHQLPLPSAGDVAHKSTLVSMLDEVYRKYKQYYQQIQEVMTSFEYISGLGNAAPYANQAIKAMYKHFKCLKNAILDQLQFNKKTHGDYSQRSVQNSGFLDHQPVWRPQRGLPERAVTVLRAWLFEHFLHPYPSDTDKLMLAKQTGLSRSQVSNWFINARVRLWKPMVEEIYMLETKQTHKNLHREDRNAIQANDHHPSNSLAMDNPSTSSQQIQDTPPKRIRNELHHDMPMGHQDEHLNVSYNLSSHPHVGLNANMAGGNNGGVSLTLGLHQNNGIGAFSEPFPVGFPVASTRRFGLGIQANNDGYVMGGHFGRDVLGGQLLHDFVG | 514 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
5 | 1651518 | 1655481 | + | Hsped.05g01370.1 | Hepe05g0137 | 569402 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Hepe05g0137 | 514 | MobiDBLite | consensus disorder prediction | 380 | 403 | - | - | |
Hepe05g0137 | 514 | FunFam | BEL1-like homeodomain protein 9 | 295 | 357 | - | - | |
Hepe05g0137 | 514 | SMART | prehox3 | 138 | 263 | IPR006563 | - | |
Hepe05g0137 | 514 | Pfam | Associated with HOX | 143 | 261 | IPR006563 | - | |
Hepe05g0137 | 514 | ProSiteProfiles | 'Homeobox' domain profile. | 289 | 352 | IPR001356 | GO:0003677(InterPro) | |
Hepe05g0137 | 514 | SMART | HOX_1 | 292 | 356 | IPR001356 | GO:0003677(InterPro) | |
Hepe05g0137 | 514 | Gene3D | - | 295 | 357 | - | - | |
Hepe05g0137 | 514 | MobiDBLite | consensus disorder prediction | 165 | 196 | - | - | |
Hepe05g0137 | 514 | CDD | homeodomain | 292 | 353 | IPR001356 | GO:0003677(InterPro) | |
Hepe05g0137 | 514 | PANTHER | HOMEOBOX PROTEIN TRANSCRIPTION FACTORS | 89 | 396 | IPR050224 | GO:0000978(PANTHER)|GO:0000981(PANTHER)|GO:0006357(PANTHER) | |
Hepe05g0137 | 514 | SUPERFAMILY | Homeodomain-like | 294 | 359 | IPR009057 | - | |
Hepe05g0137 | 514 | MobiDBLite | consensus disorder prediction | 379 | 403 | - | - | |
Hepe05g0137 | 514 | MobiDBLite | consensus disorder prediction | 1 | 25 | - | - | |
Hepe05g0137 | 514 | Pfam | Homeobox KN domain | 309 | 348 | IPR008422 | GO:0003677(InterPro)|GO:0006355(InterPro) |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Hepe05g0137 | Hepe-Chr5:1651518 | Hepe10g1010 | Hepe-Chr10:39999464 | 9.78e-71 | dispersed | |
Hepe04g0817 | Hepe-Chr4:62301640 | Hepe05g0137 | Hepe-Chr5:1651518 | 8.18e-99 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
55539 | PF07526 | POX | 1.30E-30 | No_clan | Hepe | TF |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Hepe05g0137 | - | - | - | 0.0 |