Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Hepe05g0137 ATGGGTGATTCTGGAATTGAATCCTACGACCATGTCCCTCAACAAAGCCGCCGTGACAAGCTCCGGGAACACCAATCCGCCGCCGACCGTTCTAATTTCTTCCCTTTTTACGATCCCTCTTTAATCCTCAATTCCAATAATAATAATAACAACAACAATCCAGTCTTCTCACAATTCCTCACCCACCACCACCCATTTTTCGACCCTCAAATCCAACAATCAGAATCCAACAATAACCCTCTTCTTCTAAATCATTGCACGGCGGCGGCGGCGGCGGCGGCAGCCTATGCCCCTGCTGCCCCCGGTGGCTTCAAGCCATCTCCTCTCTCGCTCTCGCTCTCCTCACAACCCTATAATCTTCTCACCAACGGCGGCAAAGCAGCTAGCTTGGTGGTCCCTCTTGGACCTTTCACTGGCTATGCTTCCATTTTGAAAGGCTCGACGTTTTTGAAACCTGCTCAGCAGTTGTTAGAAGATCTTTGTCAAGCGATTCAGCCTTCTTCTTCTTCTAATTCTGATTCTGATAGCTTGAGTGATTCTGGAATTGTTGATCATCATCATCATCATCAACTTCCACTTCCTTCTGCTGGAGATGTTGCTCATAAATCCACCCTTGTTTCTATGCTTGATGAGGTTTACAGAAAATATAAGCAATACTATCAACAGATCCAGGAAGTAATGACATCGTTTGAGTACATCTCGGGCCTCGGGAATGCGGCGCCCTATGCCAATCAGGCTATAAAAGCCATGTACAAGCATTTCAAGTGCTTGAAAAATGCAATTCTAGATCAACTTCAATTCAATAAAAAGACTCATGGTGACTACTCTCAACGATCCGTTCAGAACTCGGGATTTCTCGACCATCAGCCTGTTTGGCGACCACAACGCGGGCTTCCCGAACGAGCAGTGACTGTTCTCCGTGCTTGGTTGTTCGAACATTTTTTGCATCCTTATCCTTCTGATACAGACAAGCTTATGTTGGCAAAACAGACTGGTCTGTCTCGTAGTCAGGTATCTAACTGGTTCATCAATGCAAGAGTGAGGCTTTGGAAGCCAATGGTTGAAGAAATATACATGCTTGAAACTAAGCAAACTCACAAAAATTTGCATAGAGAAGATCGAAACGCCATTCAGGCGAATGATCATCATCCATCAAACTCGCTCGCAATGGATAACCCCTCAACATCCTCTCAACAAATTCAAGATACTCCTCCCAAACGCATCCGAAACGAACTTCATCATGACATGCCTATGGGACATCAAGACGAGCACTTGAACGTATCATACAACTTGTCGAGCCATCCCCATGTTGGCCTAAACGCAAACATGGCGGGGGGAAACAACGGTGGAGTTTCCTTAACTCTTGGTCTTCACCAGAACAATGGCATTGGTGCCTTTTCAGAACCCTTCCCTGTCGGGTTCCCCGTAGCTTCCACTCGTCGTTTCGGGCTTGGGATCCAAGCCAACAACGATGGGTACGTAATGGGTGGACATTTTGGGAGAGATGTTCTTGGAGGTCAGCTTTTACATGACTTTGTAGGCTGA 1545 46.41 MGDSGIESYDHVPQQSRRDKLREHQSAADRSNFFPFYDPSLILNSNNNNNNNNPVFSQFLTHHHPFFDPQIQQSESNNNPLLLNHCTAAAAAAAAYAPAAPGGFKPSPLSLSLSSQPYNLLTNGGKAASLVVPLGPFTGYASILKGSTFLKPAQQLLEDLCQAIQPSSSSNSDSDSLSDSGIVDHHHHHQLPLPSAGDVAHKSTLVSMLDEVYRKYKQYYQQIQEVMTSFEYISGLGNAAPYANQAIKAMYKHFKCLKNAILDQLQFNKKTHGDYSQRSVQNSGFLDHQPVWRPQRGLPERAVTVLRAWLFEHFLHPYPSDTDKLMLAKQTGLSRSQVSNWFINARVRLWKPMVEEIYMLETKQTHKNLHREDRNAIQANDHHPSNSLAMDNPSTSSQQIQDTPPKRIRNELHHDMPMGHQDEHLNVSYNLSSHPHVGLNANMAGGNNGGVSLTLGLHQNNGIGAFSEPFPVGFPVASTRRFGLGIQANNDGYVMGGHFGRDVLGGQLLHDFVG 514
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 1651518 1655481 + Hsped.05g01370.1 Hepe05g0137 569402
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Hepe05g0137 514 MobiDBLite consensus disorder prediction 380 403 - -
Hepe05g0137 514 FunFam BEL1-like homeodomain protein 9 295 357 - -
Hepe05g0137 514 SMART prehox3 138 263 IPR006563 -
Hepe05g0137 514 Pfam Associated with HOX 143 261 IPR006563 -
Hepe05g0137 514 ProSiteProfiles 'Homeobox' domain profile. 289 352 IPR001356 GO:0003677(InterPro)
Hepe05g0137 514 SMART HOX_1 292 356 IPR001356 GO:0003677(InterPro)
Hepe05g0137 514 Gene3D - 295 357 - -
Hepe05g0137 514 MobiDBLite consensus disorder prediction 165 196 - -
Hepe05g0137 514 CDD homeodomain 292 353 IPR001356 GO:0003677(InterPro)
Hepe05g0137 514 PANTHER HOMEOBOX PROTEIN TRANSCRIPTION FACTORS 89 396 IPR050224 GO:0000978(PANTHER)|GO:0000981(PANTHER)|GO:0006357(PANTHER)
Hepe05g0137 514 SUPERFAMILY Homeodomain-like 294 359 IPR009057 -
Hepe05g0137 514 MobiDBLite consensus disorder prediction 379 403 - -
Hepe05g0137 514 MobiDBLite consensus disorder prediction 1 25 - -
Hepe05g0137 514 Pfam Homeobox KN domain 309 348 IPR008422 GO:0003677(InterPro)|GO:0006355(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Hepe05g0137 Hepe-Chr5:1651518 Hepe10g1010 Hepe-Chr10:39999464 9.78e-71 dispersed
Hepe04g0817 Hepe-Chr4:62301640 Hepe05g0137 Hepe-Chr5:1651518 8.18e-99 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
55539 PF07526 POX 1.30E-30 No_clan Hepe TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hepe05g0137 - - - 0.0