Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Hepe05g0153 ATGGCCCAACTCTGTTTCCTCTGTTTTCTCTGTTTCTTCTTCCTCGCCGGCCCCGCCGCATCTCAGCAGCTCTACTTCCCCGGATTCAACGACGCCGCCGCCGTTGCCGCCAACTTAACCCTCACTGATATCGCCAAGATCGGGCCGAACGGAATCTTAAAGCTCACAAACGACACCAGCCGATTACAAGGCCATGCCTTTTACAGTTCCCCTGTTCGCTTCAAAAACTCCTCCGACGGCAAAGCTCGTTCGTTCTCCGCCGCTTTTGTCATCGCCGTCGTCCCTGAGTACCCAACCCTCGGCGGCCACGGCCTCGCCTTCACCATTGCACAGTCGAAGAACCTCCGTGGACTTCCCAGTCAGTATTTAGGCCTTCTCAATGCGAGCGACGTCGGAAACTTCTCCAACCATCTCTTCGCCGTCGAGTTCGACACCGTTCAAGATTTCGAGTTCGGCGATATCAATGACAACCATGTCGGAATCAATCTCAACACTATGGTCTCTAATGCCTCCACCACCGCCTCCTATTTCGTCGACGACGGACCCACCAAACAAAATCTAACCTTGAAATCTGGGAAGCCGATTCAAGCTTGGATCGATTACGATTCCTCTGTAAATTCCCTCACGGTGGCGCTTTCTCCATTTTCCACCAAACCCAAGAAGCCGATTCTCTCGTTTAATGTAGATCTCTCTCCGATTCTTAACGAGTTCATGTACGTTGGGTTCTCGGCCTCGACCGGCCTTCTTGCGAGTTCTCACTATGTATTGGGATGGAGTTTCAGTATGAACGGAGCAGCTAAATCTCTGGATCTTTCCTCTCTGCCTTCTGTTCCAGGGCCGAAGAAGAATCACACTGTTTTCACAATTGGGGTTTCGATTGCGGCCGTTTTGATTGTGATTATTGCGATTTCTGTAGCTGTTTTTATAATTTGGAAGATTAAAAACGCAGATATAATCGAAGCTTGGGAGCTTGAAGTTGGGCCTCATCGGTATTCTTACAAGGAGCTGAAGCAAGCGACGAAGCGATTTAGGGATAAAGAGCTTTTGGGGCGCGGTGGATTTGGGAAGGTTTATAAAGGGACTTTGCCGAATTCAAAAACCCTTGTGGCTGTGAAGCGAATTTCTCATGAATCGAAACAGGGTTTGAGGGAATTTGTGTCGGAAATCGCTAGCATTGGCCGGCTTCGTCACCGGAACTTGGTTCAGTTGCTCGGATGGTGTCGCCGCCGCGGGGATCTGCTTCTTGTTTATGATTATATGGCTAATGGCAGCTTGGATAGCTACATTTTCGAGGAGACGGATGTGATTTTGAGTTGGGAACAAAGGTTTCGGATCATAAAGGGCGTCGCCTCCGGTCTGCTGTACTTGCACGAAGGCTACGAACAGGTGGTCATTCATAGAGATGTGAAGGCTAGTAATGTTCTGCTCGATGGGGAGATGAATGGGAAGCTCGGCGATTTCGGTCTCGCTAGGCTATACGAACACGGGGCGAACCCAAGCACGACTCGGGTCGTCGGGACATTGGGATATCTGGCGCCGGAGCTACCGAGGACAGGGAAAGCCACCACAGGCTCAGATGTATATGCATTTGGTGCACTTCTTCTGGAAGTGGCCTGCGGGCGTCGACCGATCGACCCGAAAGCGACATCGGAGGAGCTGGTGCTGGTGGATTGGGTGTGGGAGAATTACAGGGAAGAGAAATTACTGGAAGTAATGGATCCAAAATTGAAAGGGGATTTCAATGTGGTTGAAGCAGTGATGATTTTGAAACTGGGGTTGTTCTGTTCGAACGATTCGGCGGCGGGGCGGCCGAGTATGAGGCAGGTGGTTCGGTTTCTGGAAGGAGAAATCGGAGTTCCGGAGGAGATTTCAGCACCAAAAGTGGTTGAAGGAAGGAAGAATGGTGAAGGATTTGATGATTTTGTGAATTCGTTTGCTTCTTCTTCTTCGATTAACAAGTTTAGTTCTTATTCGTCGACTGGAAATAGGGATATGGATATGAGTTTTGCTTCGTTTTCTACTTCTCCTCTTTCACTTCTCAATGGCAGAGATTGA 2055 49.64 MAQLCFLCFLCFFFLAGPAASQQLYFPGFNDAAAVAANLTLTDIAKIGPNGILKLTNDTSRLQGHAFYSSPVRFKNSSDGKARSFSAAFVIAVVPEYPTLGGHGLAFTIAQSKNLRGLPSQYLGLLNASDVGNFSNHLFAVEFDTVQDFEFGDINDNHVGINLNTMVSNASTTASYFVDDGPTKQNLTLKSGKPIQAWIDYDSSVNSLTVALSPFSTKPKKPILSFNVDLSPILNEFMYVGFSASTGLLASSHYVLGWSFSMNGAAKSLDLSSLPSVPGPKKNHTVFTIGVSIAAVLIVIIAISVAVFIIWKIKNADIIEAWELEVGPHRYSYKELKQATKRFRDKELLGRGGFGKVYKGTLPNSKTLVAVKRISHESKQGLREFVSEIASIGRLRHRNLVQLLGWCRRRGDLLLVYDYMANGSLDSYIFEETDVILSWEQRFRIIKGVASGLLYLHEGYEQVVIHRDVKASNVLLDGEMNGKLGDFGLARLYEHGANPSTTRVVGTLGYLAPELPRTGKATTGSDVYAFGALLLEVACGRRPIDPKATSEELVLVDWVWENYREEKLLEVMDPKLKGDFNVVEAVMILKLGLFCSNDSAAGRPSMRQVVRFLEGEIGVPEEISAPKVVEGRKNGEGFDDFVNSFASSSSINKFSSYSSTGNRDMDMSFASFSTSPLSLLNGRD 684
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 1957012 1959650 + Hsped.05g01530.1 Hepe05g0153 569418
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Hepe05g0153 684 SUPERFAMILY Protein kinase-like (PK-like) 325 634 IPR011009 -
Hepe05g0153 684 CDD lectin_legume_LecRK_Arcelin_ConA 26 264 IPR001220 GO:0030246(InterPro)
Hepe05g0153 684 CDD STKc_IRAK 349 615 - -
Hepe05g0153 684 Pfam Legume lectin domain 23 274 IPR001220 GO:0030246(InterPro)
Hepe05g0153 684 ProSitePatterns Serine/Threonine protein kinases active-site signature. 464 476 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Hepe05g0153 684 Pfam Protein kinase domain 344 551 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Hepe05g0153 684 FunFam L-type lectin-domain containing receptor kinase S.1 328 419 - -
Hepe05g0153 684 SMART serkin_6 343 613 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Hepe05g0153 684 FunFam L-type lectin-domain containing receptor kinase S.4 420 626 - -
Hepe05g0153 684 PANTHER - 44 635 IPR050528 GO:0005886(PANTHER)
Hepe05g0153 684 ProSiteProfiles Protein kinase domain profile. 343 617 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Hepe05g0153 684 SUPERFAMILY Concanavalin A-like lectins/glucanases 23 280 IPR013320 -
Hepe05g0153 684 Gene3D Transferase(Phosphotransferase) domain 1 420 629 - -
Hepe05g0153 684 Gene3D Phosphorylase Kinase; domain 1 328 419 - -
Hepe05g0153 684 ProSitePatterns Protein kinases ATP-binding region signature. 349 372 IPR017441 GO:0005524(InterPro)
Hepe05g0153 684 Gene3D - 21 263 - -
Hepe05g0153 684 FunFam L-type lectin-domain containing receptor kinase S.4 20 268 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Hepe05g0153 Hepe-Chr5:1957012 Hepe09g0235 Hepe-Chr9:2049108 2.44e-160 dispersed
Hepe10g0665 Hepe-Chr10:8828724 Hepe05g0153 Hepe-Chr5:1957012 4.95e-14 dispersed
Hepe05g0153 Hepe-Chr5:1957012 Hepe05g0154 Hepe-Chr5:1964944 1.17e-231 tandem
Hepe04g0834 Hepe-Chr4:62599988 Hepe05g0153 Hepe-Chr5:1957012 2.75e-255 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
72795 PF00069 Pkinase 6.30E-46 CL0016 Hepe PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hepe05g0153 - - - 0.0