Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Hepe05g0168 ATGGATCCACGCCTTAGACGACATGGTGGTTCCACGAATGGAATTCTTTTAGGTAATGGTTCTTTTGCGGTTCAAGCACAAGAGAACGTTCTTGGCAGGCCTAGATTTCAGAGTACGATTTTGAGTCATAACTTTCCAGAATTTAATTGCCTTCCCTACGATCCATCACTGAGTAATATAGCCTCAAGTTCCAGTGTTGTAACCTCATCTTCTAATGATGCGAGTCATGAGGAAGATTTTCTGGAAGATTGTGATTTTTCTGATGCTGTTTTGAGATTCATAAATCAGATTCTCATGGAAGAAGATATGGAGGATAAGACTTGCATGCTTCAAGATTCTTTGGATCTTCAAGCTGCGGAGAAATCATTCTACGAGGTCCTTGGAAAAAAGTACACTCCTTCCCCAGAACCAAATAGATCTCTGGCGAATCAATACAGTGATTGTGGAGATAGTAGTAATTACCTGAATAGTTACAGTAATACTTCTTATTATGGTGATGATAACCCTTTTCAAACTCTGAGTGAAGATGTATTTCAAATCAGAAGCACTTTAGGTGATACCATTTCCCCATCGTCTAATAGCTCCTCAAATAGTATAATTAGTGGGGTTGATGGATGGGTGGACTTCTCCAATAATACAATTCGAGTCCCTGAGCCGAACAACAGAACCCAATCTATTTGGCAGTTTCAGAAAGGGTTTGAAGAGGCAAGCAAGTTTTTACCTGGAGGAAACAACTTGTGTCTTGATTTTGAGGTAAATGGGTCAGCAACTCAGGGTCCGGACGAGGGAACAAGCCAGATATATGTGAAGGCAGCAAGAAAGGATCAGAGGAATATTTTGTCGCTTGAATCACGAGTAAGAAAGAATCCTCACGATGAGGATGGAGATTTGGAAGAAGAGAGAAGCAGCAAGCAAGCAGCTGTATTTGCAGAGTCGACCTTGCGATCTAAGATGTTTGATATTGTGTTGCTTTGTAGTGCAGGGGAGGGGCATGATCGGTTAGTTTCATTTCGACAGGAATTACAGAATGCTAAAATCAAAAGCATGCTGCTAACTGGGCAACTTAAGGGGTCTAGTGGTGGTAGGGGTCGTCGGAAGAAGCAAAGTGGGAAAAAGGAGGTTGTGGATTTGAGAACTCTTCTAATTAGCTGTGCTCAAGCTGTTGCAGCTGATGACCATAGGAATGCCAGTGAGCTTCTAAAGCAGGTCAGGCAACATGCTTCTCCTTTTGGGGATGGAAATCAGAGGTTGGCTAGTTGTTTTGCTGATGGTCTGGAAGCACGCTTGGCAGGTACTGGTAGCCAGATTTATAAAGGTCTAATTAATAAAAGAACATCTGCTGCTGATATATTGAAAGCTTACCACCTGTATCTTGCTGCATGCCCATTTAGGAAGATCTCTAATTTTACTTCGAACAGGACTACAATGATTGCTGCAGAGAATGCAACTAAGCTTCATGTCATAGATTTTGGTATCCTTTACGGTTTCCAGTGGCCTACTTTAATCCAGAGACTTTCGTGGAGAAAAGGAGGACCTCCAAAGCTTCGGATTACTGGAATAGAATTTCCCCAGCCTGGCTTCCGTCCGGCAGAGAGAGTTGAAGAGACAGGCCGTCGCTTGGCGGCCTATGCAGAGACTTTCAATGTGCCATTTGAGTATAATGCTATAGCAAAAAAATGGGAAACTATTACAGTCGAAGATCTCAATATCGATAAGGATGAGTTCCTAGTTGTTAACTGTTTGTATCGAGCTAAAAATTTGCTTGATGAGAGTGTTGCCACAGAGAGTGCTAGAAATGCCGTTCTTAGATTGATACACAAAATTAATCCCAACTTATTCATCAGTGGCATTGTCAATGGGGCATACAATGCTCCTTTCTTCGTTACCCGATTTCGAGAGGCTTTGTTTCACTTTTCTGCTATCTTTGATATGCTTGAAACGGTTGTACCTCGTGAGGATTGGGAGAGAATGCTGTTGGAGAAAGAGATCTTTGGCAGAGAAGCTTTAAATGTTATAGCATGTGAGGGATGGGAGAGAGTGGAAAGACCAGAAACATACAAGCAATGGCAATTCCGGATCATGAGGGCTGGATTTGTGCAACTGCCTTTTGATCCTGAGATTTTTGAGAGAGCAGTCGAAAAGGTGCGGTCAAGTTACCACAGAGATTTTTTGATTGATGAAGATAGTAGATGGATACTGCAGGGATGGAAAGGTCGAATTATATATGCCATCTCTGCATGGAAACCTATTATAGAGTAA 2259 42.05 MDPRLRRHGGSTNGILLGNGSFAVQAQENVLGRPRFQSTILSHNFPEFNCLPYDPSLSNIASSSSVVTSSSNDASHEEDFLEDCDFSDAVLRFINQILMEEDMEDKTCMLQDSLDLQAAEKSFYEVLGKKYTPSPEPNRSLANQYSDCGDSSNYLNSYSNTSYYGDDNPFQTLSEDVFQIRSTLGDTISPSSNSSSNSIISGVDGWVDFSNNTIRVPEPNNRTQSIWQFQKGFEEASKFLPGGNNLCLDFEVNGSATQGPDEGTSQIYVKAARKDQRNILSLESRVRKNPHDEDGDLEEERSSKQAAVFAESTLRSKMFDIVLLCSAGEGHDRLVSFRQELQNAKIKSMLLTGQLKGSSGGRGRRKKQSGKKEVVDLRTLLISCAQAVAADDHRNASELLKQVRQHASPFGDGNQRLASCFADGLEARLAGTGSQIYKGLINKRTSAADILKAYHLYLAACPFRKISNFTSNRTTMIAAENATKLHVIDFGILYGFQWPTLIQRLSWRKGGPPKLRITGIEFPQPGFRPAERVEETGRRLAAYAETFNVPFEYNAIAKKWETITVEDLNIDKDEFLVVNCLYRAKNLLDESVATESARNAVLRLIHKINPNLFISGIVNGAYNAPFFVTRFREALFHFSAIFDMLETVVPREDWERMLLEKEIFGREALNVIACEGWERVERPETYKQWQFRIMRAGFVQLPFDPEIFERAVEKVRSSYHRDFLIDEDSRWILQGWKGRIIYAISAWKPIIE 752
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 2073651 2076880 - Hsped.05g01680.1 Hepe05g0168 569433
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Hepe05g0168 752 Pfam GRAS domain family 377 748 IPR005202 -
Hepe05g0168 752 ProSiteProfiles GRAS family profile. 368 748 IPR005202 -
Hepe05g0168 752 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 352 747 IPR005202 GO:0003700(PANTHER)|GO:0005634(PANTHER)|GO:0006355(PANTHER)|GO:0043565(PANTHER)
Hepe05g0168 752 MobiDBLite consensus disorder prediction 281 303 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Hepe05g0168 Hepe-Chr5:2073651 Hepe08g0397 Hepe-Chr8:3565298 6.11e-69 dispersed
Hepe10g1249 Hepe-Chr10:47888628 Hepe05g0168 Hepe-Chr5:2073651 3.52e-182 wgd
Hepe05g0168 Hepe-Chr5:2073651 Hepe08g0779 Hepe-Chr8:6977131 2.11e-190 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
55540 PF03514 GRAS 1.80E-115 CL0063 Hepe TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hepe05g0168 K27753 - csv:101205887 1291.56