Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Hepe05g0216 ATGGTTAAACCCTGCTGGAAACCTCATGATGATGGCGATTCGAACGGACGAGTTGATGGATTGTCGTGGTCTAAGGATCTGGGGCACCATGTTTATGGACAATTCTCCATGGCAGTGATCCAAGCTAATAATGTGGTGGAAGATCAAAGCCAGCTTGAATCTGGGGCGTTGAGTATGACCGACCCAGGTCCGCAGGGGACCTTTGTCGGAGTTTATGACGGTCATGGCGGAACTGAAGCTTCACGGTTCGTCAACGACAATCTCTTCAGCAATCTCAAAAGATATGCATCTTTGCACCAAAACATATCAGAAAATGTTATCAGGAAGGCTTTTGCAGCAACAGAAGAGGGATTTCTCTCTCTTGTCCAGAAACAGTGGCTCAATGAACCAAAGATTGCATCTGCTGGAACATGTTGTTTGGTGGGGATCATATGCAATGGACAGCTATATATTGCAAATGCAGGCGATTCGCGAGCGGTGCTCGGGAGAACTGAGAGAGCCACTAGAGAAGTCATTGCCATTCAATTGTCCACTGAGCACAATGCAAGCATAGAGTCGGTGAGAGATGAACTTCGGATGGTTCATCCAGATGATCCTCAGATTGTGATCCTAAAACACAATGTTTGGCGTGTTAAAGGTATCATACAGATTTCAAGATCCATTGGTGATGCATATTTGAAAAAGGCAAAGTTCAACAGACCGCCTCTGCCGTCTAAATTTCAACTGCCTGAGCCGTTTTACAAACCGATCCTCAGCGCAGAACCGTCAATACTGGTACACAAACTCCGCCCAGATGATCAATATCTCATATTTGCTTCTGATGGCCTGTGGGAGCACCTTAGCAACCAGAAGGCTGTTGACATCGTCAACAGCTATCCTCGAAATGGAATAGCAAGGAGACTTATCAAGGCTGCACTTCGAGAAGCAGCTAAAAAAAGAGAGATGAGATATTCAGACCTGAAAAAGATAGACAGAGGTGTGAGAAGGCATTTCCACGATGACATTTCTGTTGTAGTTATGTTCTTAGATCCTCATTTGATCAATGGTAGGCCCTCCCCTTGTTCCTTGTCAATCAGAGGAGGAGAAGGTCTCCCTTTGACGGCAAACTCCTAG 1113 45.64 MVKPCWKPHDDGDSNGRVDGLSWSKDLGHHVYGQFSMAVIQANNVVEDQSQLESGALSMTDPGPQGTFVGVYDGHGGTEASRFVNDNLFSNLKRYASLHQNISENVIRKAFAATEEGFLSLVQKQWLNEPKIASAGTCCLVGIICNGQLYIANAGDSRAVLGRTERATREVIAIQLSTEHNASIESVRDELRMVHPDDPQIVILKHNVWRVKGIIQISRSIGDAYLKKAKFNRPPLPSKFQLPEPFYKPILSAEPSILVHKLRPDDQYLIFASDGLWEHLSNQKAVDIVNSYPRNGIARRLIKAALREAAKKREMRYSDLKKIDRGVRRHFHDDISVVVMFLDPHLINGRPSPCSLSIRGGEGLPLTANS 370
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 2604721 2606210 + Hsped.05g02160.1 Hepe05g0216 569481
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Hepe05g0216 370 Gene3D - 22 349 IPR036457 -
Hepe05g0216 370 Pfam Protein phosphatase 2C 64 311 IPR001932 -
Hepe05g0216 370 ProSiteProfiles PPM-type phosphatase domain profile. 34 342 IPR001932 -
Hepe05g0216 370 FunFam Phosphatase 2C family protein 23 351 - -
Hepe05g0216 370 SMART PP2C_4 12 340 IPR001932 -
Hepe05g0216 370 ProSitePatterns PPM-type phosphatase domain signature. 68 76 IPR000222 GO:0043169(InterPro)
Hepe05g0216 370 SUPERFAMILY PP2C-like 32 343 IPR036457 -
Hepe05g0216 370 PANTHER PROTEIN PHOSPHATASE 27 341 IPR015655 GO:0004722(InterPro)|GO:0004722(PANTHER)|GO:0006470(InterPro)|GO:0035970(PANTHER)
Hepe05g0216 370 CDD PP2Cc 32 342 IPR001932 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Hepe04g1630 Hepe-Chr4:71680648 Hepe05g0216 Hepe-Chr5:2604721 1.78e-175 dispersed
Hepe05g0216 Hepe-Chr5:2604721 Hepe08g0307 Hepe-Chr8:2764993 2.05e-178 dispersed
Hepe01g0864 Hepe-Chr1:72746006 Hepe05g0216 Hepe-Chr5:2604721 2.38e-182 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hepe05g0216 - - - 0.0