Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Hepe05g0218 ATGGCTTACTATTGCCCATTTGCACAGCGTGCTTGGATCACAAGAAATTTCAAGGGATTACAAGATAAAATTGAACTAGTGCCCCTAAACATTCAAAACAGGCCTGTCTGGTATAAGGAAAAAGTCTACCCTTCAAACAAGGTGCCAGCTTTGGAACACAATGGGAAAGTTATTGGAGAAAGCCTTGATTTGATCAAATACATAGATAACAACTTTGAAGGCCCTTCTCTTTTCCCAGATGATCTTGCTAAAAGGCAATTTGGTGAAGAGTTGGTAGCTTATACTGATACATTTACTGGGGCAGTATACCCTTCATTTAAGGGTGACCCAGCTAAGGAAGCAGGTCCTCAATTTGATTACCTGGAGAATGCTCTGCAGAAATTTGATGATGGACCATTCTTTTTGGGTCAATTCAGTGGGGTGGACATTGCATACATCACATTTATTGAAAGGTTTCATGTTTTCTTACCTGAAGTTTTCAAGTATGATATCACAGAAGGAAGGCCTAATCTAGCTACTTGGATTGAGGAATTCAACAAAATTGATGCTTACAAGCAAACCAAGTATGATCCTAAAGCCATTGTTGAACTTTACAAGAAGCGTTTCATGCGAAGTTTCATGGGACACACCTCTGGACCTTCTAATGTTGGCCATTCTGGGGCTAAACACATTTTGACTCATAGGCTCGTTGCACCACGGGGCCAAGACCTTCAAGTCGTTATTACAAAAGATGCTTTTCACAGAAGTTATTGTTTGGAAAAGAACGGTATTCAAATGAAATTCAAGCTTTGGTCGATGATATTCAAACACAATAACGCATCGGGCAAGTGCTGA 834 40.05 MAYYCPFAQRAWITRNFKGLQDKIELVPLNIQNRPVWYKEKVYPSNKVPALEHNGKVIGESLDLIKYIDNNFEGPSLFPDDLAKRQFGEELVAYTDTFTGAVYPSFKGDPAKEAGPQFDYLENALQKFDDGPFFLGQFSGVDIAYITFIERFHVFLPEVFKYDITEGRPNLATWIEEFNKIDAYKQTKYDPKAIVELYKKRFMRSFMGHTSGPSNVGHSGAKHILTHRLVAPRGQDLQVVITKDAFHRSYCLEKNGIQMKFKLWSMIFKHNNASGKC 277
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 2612097 2617836 + Hsped.05g02180.1 Hepe05g0218 569483
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Hepe05g0218 277 SUPERFAMILY Thioredoxin-like 3 77 IPR036249 -
Hepe05g0218 277 Pfam Glutathione S-transferase, N-terminal domain 2 75 IPR004045 -
Hepe05g0218 277 SFLD Glutathione Transferase (cytosolic) 4 178 IPR040079 -
Hepe05g0218 277 CDD GST_C_Lambda 81 199 - -
Hepe05g0218 277 Pfam Glutathione S-transferase, C-terminal domain 118 176 - -
Hepe05g0218 277 SFLD Main (cytGST) 4 178 - -
Hepe05g0218 277 Gene3D Glutaredoxin 1 73 - -
Hepe05g0218 277 Gene3D - 74 205 - -
Hepe05g0218 277 SUPERFAMILY GST C-terminal domain-like 72 202 IPR036282 -
Hepe05g0218 277 FunFam Lambda class glutathione S-transferase 74 205 - -
Hepe05g0218 277 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 1 76 IPR004045 -
Hepe05g0218 277 PANTHER GLUTATHIONE S-TRANSFERASE L1 2 210 IPR044629 GO:0004364(PANTHER)|GO:0004364(InterPro)|GO:0010731(PANTHER)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Hepe05g0218 Hepe-Chr5:2612097 Hepe05g0219 Hepe-Chr5:2617925 1.16e-114 tandem
Hepe01g0865 Hepe-Chr1:72752811 Hepe05g0218 Hepe-Chr5:2612097 1.03e-97 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hepe05g0218 K00799 - csv:101210004 394.815