Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Hepe05g0223 ATGATTTTGATTCCTTGTTGTGGAAATTCAAACATGAAGTCTAACTCCAAGAAATTGAAGAAAATGGAATCTCAGAACAGCCGATTAGATCCGATCGAAGCTCCTTCAACTTCAGAGAAACTAAAGACAAGTTCCTCCTTTAGGGAAGCCTCAAATGGAGGATCTGATCATATCAAAGCACAGGCACAGATATTTTCATTCCGGGAGTTGGCAGCCGCTACCAGGAATTTTAGGGTAGACTGTCTTTTGCGCGAGGGAGGTTCTGGTAGAATTTACAAAGGAAATTTAGAAAGCATCAATCAGGTAGTGGCAATCAAACAGCTTGATGGGTTGCAAGGGAACAGGGAGTTTCTCCTTGAAGTGCTGATGTTAAACGTACTTCATCACCCAAATCTAGTTAATCTGATTGGTTATTGTGCTGATGGAGATCAAAGGCTGCTCATATATGAACATATGCCTCTAGGATCTCTAAATGATCATTTATATGACATTTCACCTGGTACCGAAGTATTAGATTGGAATACAAGAATGAAAATAGCTGCTGGGGCAGCTCGAGGATTGGAATATTTGCATGTTAAAGCTAGCCCGCCAGTTATTTATCGAAATTTTAAAAGTTCCAACATTCTGCTTGATGAAGGATATCATCCCAAGCTGTTTGATTTAGGATTGGCCAAACTTGGGCCTGTTGGGGATAAGACACATGTATCTACCAGAGTTGTGGGAACTTACGGATATTGTGCGCCTGAATATGCGATGACTGGTCAGTTATCTCTCAAGTCAGATGTTTATAGTTTTGGTGTTGTTCTTCTAGAAATCATAACAGGCAGGAAGGCAATTGATTATTCAAGAGCTGCAGAGGAGCAAAATTTGGTTTCATGGGCAACACCATTATTTAAAGATCGTTTGAGATTTGCACAAATGGCAGATCCAATGCTTAGAGGCCAATACCCTTCAAGGGGTTTGTATCAGGCTCTTGCAATTTCAGCAATGTGTGTTCAAGAGCAGGAAAATATACGCCCTGCGATCACCGACGTCGTCGCAGCTTTATCTTATCTTGCTTCCCAAAGATACGGTCCCGGTACGAACATACCCGACAACTCCTCTGCATCTGTGCCAGTACTCCTCCAAGAACCAATAGAGATTCTGATATGA 1152 41.67 MILIPCCGNSNMKSNSKKLKKMESQNSRLDPIEAPSTSEKLKTSSSFREASNGGSDHIKAQAQIFSFRELAAATRNFRVDCLLREGGSGRIYKGNLESINQVVAIKQLDGLQGNREFLLEVLMLNVLHHPNLVNLIGYCADGDQRLLIYEHMPLGSLNDHLYDISPGTEVLDWNTRMKIAAGAARGLEYLHVKASPPVIYRNFKSSNILLDEGYHPKLFDLGLAKLGPVGDKTHVSTRVVGTYGYCAPEYAMTGQLSLKSDVYSFGVVLLEIITGRKAIDYSRAAEEQNLVSWATPLFKDRLRFAQMADPMLRGQYPSRGLYQALAISAMCVQEQENIRPAITDVVAALSYLASQRYGPGTNIPDNSSASVPVLLQEPIEILI 383
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 2634612 2639612 - Hsped.05g02230.1 Hepe05g0223 569488
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Hepe05g0223 383 Gene3D Phosphorylase Kinase; domain 1 37 151 - -
Hepe05g0223 383 ProSiteProfiles Protein kinase domain profile. 77 352 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Hepe05g0223 383 CDD STKc_IRAK 85 349 - -
Hepe05g0223 383 MobiDBLite consensus disorder prediction 29 54 - -
Hepe05g0223 383 Gene3D Transferase(Phosphotransferase) domain 1 152 361 - -
Hepe05g0223 383 SUPERFAMILY Protein kinase-like (PK-like) 59 349 IPR011009 -
Hepe05g0223 383 Pfam Protein tyrosine and serine/threonine kinase 82 293 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Hepe05g0223 383 FunFam Serine/threonine-protein kinase PBS1 152 367 - -
Hepe05g0223 383 MobiDBLite consensus disorder prediction 22 54 - -
Hepe05g0223 383 PANTHER OS07G0668900 PROTEIN 27 361 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Hepe05g0223 Hepe-Chr5:2634612 Hepe05g1473 Hepe-Chr5:64166351 1.14e-167 dispersed
Hepe05g0223 Hepe-Chr5:2634612 Hepe05g0225 Hepe-Chr5:2666946 1.49e-211 proximal
Hepe01g0871 Hepe-Chr1:72816633 Hepe05g0223 Hepe-Chr5:2634612 3.32e-180 wgd
Hepe05g0223 Hepe-Chr5:2634612 Hepe07g2291 Hepe-Chr7:67246039 7.62e-96 wgd
Hepe05g0223 Hepe-Chr5:2634612 Hepe08g0844 Hepe-Chr8:7634863 5.65e-144 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
72798 PF00069 Pkinase 1.90E-35 CL0016 Hepe PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hepe05g0223 - - - 0.0