Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Hepe05g0225 ATGATTTGGATTCCTTGTTCTGGAAATTCAAACCGGAAGGTCAAGTCCAAGAAATTGAACAAGTTTGAATCTCAGAGGAGTCGAGTTGATCCGATCAAAGCTTCTTCAGGTTCCTCCTTCAGTGAAGCCTCGAAAGGTGGAGGATCTGATCATATCAAGGCACAGATATTTTCATTCCGAGAGTTGGCATCCGCGACCAGGAATTTTAAGGCAGACTGTCTTTTGGGCGAGGGAGGTTTTGGTAGAGTTTACAAAGGAAATTTGGAAAGCATCAATCAGGTAGTGGCAATCAAACAGCTTGATCGCAATGGGTTGCAAGGGAACAGGGAGTTTCTCGTTGAAGTGTTGATGTTAAGCCTACTTCATCACCCAAATCTAGTTAATCTGACTGGTTATTGTGCTGATGGAGATCAAAGGCTTCTGATCTATGAATATATGCCTCTAGGATCTTTAGATGACCATTTACATGATATTTCACCTGGTACAAAAGTACTAGATTGGAATACAAGAATGAAAATAGGTGCTGGGGCAGCACGAGGATTGGAATATTTGCATGACAAAGCTAGCCCGCCAGTTATTTATCGAGATTTAAAAAGTTCCAACATTCTGCTTGATAAAGGTTATCATCCCAAGCTGTCTGATTTTGGATTGGCCAAACTTGGGCCTGTTGGGGATAATACACATGTATCTACCAGAGTTATGGGCACCTACGGGTATTGTGCGCCCGAATATGCGATGACTGGTCAGTTAACTCTCAAATCAGATGTTTATAGCTTTGGTGTTGTCCTTCTAGAAATCATAACAGGCAGGAAAGCAATTGATGATTCAAGAGCTGCAGGGGAGCAAAATCTGGTTTCATGGGCAAGACCATTGTTTAAAGAACGTCTGAGATTTGTACAAATGGCAGATCCAATGCTTAGAGGCCAATACCCTTCAAGGGGTTTGTACCAGGCTCTTGCAATTGCAGCAATGTGTGTTCAAGAGCAGCCAAATATGCGCCCTGTGATCGCCGATGTCGTCACAGCTTTATCTTATCTTGCTTCCCAAAGATACGACCCCGATACGAACATACCCCACAGCAGCTCCCCTGCATCTGTCTGTACTCCTCCAAGAAACAACAGAGATTCTGATAGGAAGCCTAATGGCGGTAGACGATACAATAGAAATCACACTAGAAGACTATAA 1185 43.12 MIWIPCSGNSNRKVKSKKLNKFESQRSRVDPIKASSGSSFSEASKGGGSDHIKAQIFSFRELASATRNFKADCLLGEGGFGRVYKGNLESINQVVAIKQLDRNGLQGNREFLVEVLMLSLLHHPNLVNLTGYCADGDQRLLIYEYMPLGSLDDHLHDISPGTKVLDWNTRMKIGAGAARGLEYLHDKASPPVIYRDLKSSNILLDKGYHPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAMTGQLTLKSDVYSFGVVLLEIITGRKAIDDSRAAGEQNLVSWARPLFKERLRFVQMADPMLRGQYPSRGLYQALAIAAMCVQEQPNMRPVIADVVTALSYLASQRYDPDTNIPHSSSPASVCTPPRNNRDSDRKPNGGRRYNRNHTRRL 394
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 2666946 2670141 - Hsped.05g02250.1 Hepe05g0225 569490
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Hepe05g0225 394 PANTHER OS07G0668900 PROTEIN 26 362 - -
Hepe05g0225 394 Gene3D Phosphorylase Kinase; domain 1 42 145 - -
Hepe05g0225 394 MobiDBLite consensus disorder prediction 29 45 - -
Hepe05g0225 394 ProSitePatterns Serine/Threonine protein kinases active-site signature. 192 204 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Hepe05g0225 394 FunFam Serine/threonine-protein kinase PBS1 42 145 - -
Hepe05g0225 394 Pfam Protein tyrosine and serine/threonine kinase 72 342 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Hepe05g0225 394 Gene3D Transferase(Phosphotransferase) domain 1 146 360 - -
Hepe05g0225 394 ProSitePatterns Protein kinases ATP-binding region signature. 75 98 IPR017441 GO:0005524(InterPro)
Hepe05g0225 394 SMART serkin_6 69 346 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Hepe05g0225 394 CDD STKc_IRAK 75 343 - -
Hepe05g0225 394 FunFam Serine/threonine-protein kinase PBS1 146 361 - -
Hepe05g0225 394 SUPERFAMILY Protein kinase-like (PK-like) 53 343 IPR011009 -
Hepe05g0225 394 MobiDBLite consensus disorder prediction 7 49 - -
Hepe05g0225 394 MobiDBLite consensus disorder prediction 354 371 - -
Hepe05g0225 394 ProSiteProfiles Protein kinase domain profile. 69 346 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Hepe05g0225 394 MobiDBLite consensus disorder prediction 354 394 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Hepe01g0871 Hepe-Chr1:72816633 Hepe05g0225 Hepe-Chr5:2666946 5.90e-200 dispersed
Hepe05g0225 Hepe-Chr5:2666946 Hepe05g1473 Hepe-Chr5:64166351 5.43e-186 dispersed
Hepe05g0223 Hepe-Chr5:2634612 Hepe05g0225 Hepe-Chr5:2666946 1.49e-211 proximal
Hepe05g0225 Hepe-Chr5:2666946 Hepe05g0231 Hepe-Chr5:2722296 5.98e-70 proximal
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
72799 PF07714 PK_Tyr_Ser-Thr 2.50E-45 CL0016 Hepe PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hepe05g0225 - - - 0.0