Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Hepe05g0231 ATGGAGATTAAGCTTCTCCTTCTTCTCTTTCTTTTCAATGTCTCCTTTGCTCAGATGCCAGGGTTTGTAAGTTTGGACTGTGGAGGTCAAGAAAGTTTCAGTGATGATATTGGTCTGGAGTGGGTTCCAGATACTCAAGTTCGTTTTGGAGAAACAATTAACATTTCTGTTGCAAATGAGACAAGGAGGGAATACATGACCTTAAGACACTTCCCTGCTGATTCCAGGAAGTACTGTTACTCACTCAATGTCACTAGTAGAACTCGTTACCTTCTCAGAGCAACATTTTTATATGGTAACTTCGACAATAACAACGTGTATCCGAAATTTGACATTTCCCTTGGGGCAACTCATTGGTCAACAATTGTCATATCTGATGCCAACACTATAGAGGTTCGAGAGCTCATATTTCTGGCTTCAACTCCTACTGTGAGTGTTTGTTTGTCAAATGCTACAACTGGGCAGCCATTCATCTCCACGCTTGAGCTTCGACAATTTAATGGCTCTATCTACTATACTGAATTTGAGGATCAGTTTTACCTAAGTGTCTCTGCAAGGATAAATTTTGGAGCAGATTCCGAAGATCCAGTAAGGTATCCTGATGATCCATTTGACCGGATATGGGAGTCGGACTCTGTGAGAAAAGCAAATTACCTTGTTGATGTTGCTGCTGGTACTGAAAAAGTTTCCACCAAAATGCCAATAGATGTAGATAGAGATGAAAGACCACCTCAAAAAGTTATGCAGACAGCTGTAGTTGGCAGAAATGGTTCATTAACTTACCGGTTAAATTTGGATGGTTTTCCTGGCTTTGGATGGGCAGTCACCTACTTTGCAGAAATTGAAGACTTGGATCCAACTGAAACAAGAAAATTCAGGCTTGTACTTCCCGGCATGCCTGATATCAGCAAAGCTGTAGTCAACATTGAAGAAAATGCTCAAGGAAAAAACCGGCTTTATGAGCCTGGTTTTACCAACTTAACCTTCCCTTTTGTATTATCTTTTCGGTTTGGGAAAACATCAGATTCTTCGTTGGGACCTCTGTTAAATGCTATGGAGATTAACAAGTATCTCCAAAAAAGTGATGGTTCTCTAGATGGAGCAGCTGTTGCTAGTGTAATTTCAGAATTCTCATCTTCAGATTGGGATGAAGGTGGTGATCCATGCAGGCCAGTTCCTTGGTCATGGTTGCAATGTAACTCTGATCCACGACCAAGAATAGGGAAAATTTCTTTGTCCAAAAAGAATTTGACGGGGAACATCCCTACAGACCTTGCAAAGTTGAGCGGTTTAGTTGAATTGTGGCTTGATGGAAACTCATTCGTTGGTGCTATACCCGATTTTACTGGATGTGTGGACTTGAAAATCCTCCATCTTGAGAACAACCAGTTGACTGGAGAGTTGCCTTCCTCTTTAGTAAATCTACCAAGTTTACGGGAGCTGTATGTGCAGAATAACATGTTATCTGGAACAGTGCCTTCCGGTCTTCTCAATAAAAACCTAGTTTTTAACCACGTTTATATCATTGTGGGTTCAGTAATTGGTGCTGTTGTGCTGCTGTTGGCCACTGTGGTATCTTGCTACTTTTTGCAAAGAGGAAGAAAAAAATATCGTGAACAAGATCTACTTGAAGAATCCTTGCCTGTACAAAGATTTGCCTCTTCAAAGGGTGATGCCCCCAAGGAATCCGCACATTGCTTCAGTGTTAATGAAATTGAAGAAGCAACAAGAGATTTTGAAAGAAAAATTGGATCTGGAGGTTTTGGTGTTGTATACTACGGGAAATTAAACGATGGAAAAGAAATCGCAGTTAAAGTTTTGACTAGTAATTCCTTCCAGGGAAAGCGAGAATTTGCGAATGAGGTGACTCTTCTTTCAAGGATTCATCACAGAAATCTTGTACAATTTCTTGGATATTGTCAAGAAGAAGACAGAAGTATGCTTGTCTATGAGTTCATGCATAATGGAACTCTCAAGGAACATCTTTATAGTCCACTAACACGAGGAAAAACTATCAGTTGGATAAAGCGCCTCGAGATTGCTGAAGATTCTGCTAGAGGCATTGAATACCTTCATACAGGTTGTATACCAGCAATTATTCATAGGGACTTGAAAAGCAGTAATATTCTTCTTGACAGGCAAATGAAAGCAAAGGTTTCAGATTTTGGTCTTTCCAAGCTTGCGGTGGATGGTGTCTCCCACGTGTCCAGCATCGTTCGGGGAACTGTCGGATATTTGGATCCAGAGTATTATATCTCTCAGCAGTTGACAGACAAGAGCGATGTATATAGCTTTGGCGTTATTCTTCTCGAGTTGATATCTGGTCAAGAAGCTATATCTAACGTAAACTTCGGTGTTAATTGTCGCAACATCGTCCAGTGGGCAAAATTACACATCGAGAGCGGGGACATTCAAGGGATCATCGACCCATCGCTACGCAATGAATATGACATTCAATCGATGTGGAAAATCGCAGAGAAAGCGTTGATGTGTGTCCAGCCACATGGACACCTGAGGCCATCCATATCTGAAGTGCTGAAGGAGATACAGGATTCAATTATGATTGAAAGGGAACATACTGCAATTAGAGAAGGTAACTCTGATGACATGTCTAGAAATTCAGTCCATTCTATGAATATGGGATCTCTTGATTTGTGTGGAAACGAAAACTACGTGTCGTTTGACGAATCCATTGCTCGACCTACTGCAAGGTAG 2715 40.99 MEIKLLLLLFLFNVSFAQMPGFVSLDCGGQESFSDDIGLEWVPDTQVRFGETINISVANETRREYMTLRHFPADSRKYCYSLNVTSRTRYLLRATFLYGNFDNNNVYPKFDISLGATHWSTIVISDANTIEVRELIFLASTPTVSVCLSNATTGQPFISTLELRQFNGSIYYTEFEDQFYLSVSARINFGADSEDPVRYPDDPFDRIWESDSVRKANYLVDVAAGTEKVSTKMPIDVDRDERPPQKVMQTAVVGRNGSLTYRLNLDGFPGFGWAVTYFAEIEDLDPTETRKFRLVLPGMPDISKAVVNIEENAQGKNRLYEPGFTNLTFPFVLSFRFGKTSDSSLGPLLNAMEINKYLQKSDGSLDGAAVASVISEFSSSDWDEGGDPCRPVPWSWLQCNSDPRPRIGKISLSKKNLTGNIPTDLAKLSGLVELWLDGNSFVGAIPDFTGCVDLKILHLENNQLTGELPSSLVNLPSLRELYVQNNMLSGTVPSGLLNKNLVFNHVYIIVGSVIGAVVLLLATVVSCYFLQRGRKKYREQDLLEESLPVQRFASSKGDAPKESAHCFSVNEIEEATRDFERKIGSGGFGVVYYGKLNDGKEIAVKVLTSNSFQGKREFANEVTLLSRIHHRNLVQFLGYCQEEDRSMLVYEFMHNGTLKEHLYSPLTRGKTISWIKRLEIAEDSARGIEYLHTGCIPAIIHRDLKSSNILLDRQMKAKVSDFGLSKLAVDGVSHVSSIVRGTVGYLDPEYYISQQLTDKSDVYSFGVILLELISGQEAISNVNFGVNCRNIVQWAKLHIESGDIQGIIDPSLRNEYDIQSMWKIAEKALMCVQPHGHLRPSISEVLKEIQDSIMIEREHTAIREGNSDDMSRNSVHSMNMGSLDLCGNENYVSFDESIARPTAR 904
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 2722296 2730278 + Hsped.05g02310.1 Hepe05g0231 569496
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Hepe05g0231 904 SUPERFAMILY L domain-like 391 498 - -
Hepe05g0231 904 PANTHER OS07G0107800 PROTEIN-RELATED 453 857 - -
Hepe05g0231 904 Pfam Malectin-like domain 25 355 IPR024788 -
Hepe05g0231 904 ProSiteProfiles Protein kinase domain profile. 577 862 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Hepe05g0231 904 Pfam Leucine Rich Repeat 454 475 IPR001611 GO:0005515(InterPro)
Hepe05g0231 904 Pfam Leucine Rich Repeat 477 496 IPR001611 GO:0005515(InterPro)
Hepe05g0231 904 Gene3D Phosphorylase Kinase; domain 1 552 652 - -
Hepe05g0231 904 FunFam Leucine-rich repeat receptor-like protein kinase 555 652 - -
Hepe05g0231 904 ProSitePatterns Protein kinases ATP-binding region signature. 583 605 IPR017441 GO:0005524(InterPro)
Hepe05g0231 904 ProSitePatterns Serine/Threonine protein kinases active-site signature. 699 711 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Hepe05g0231 904 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 404 492 - -
Hepe05g0231 904 SMART serkin_6 577 854 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Hepe05g0231 904 FunFam LRR receptor-like serine/threonine-protein kinase IOS1 653 862 - -
Hepe05g0231 904 CDD STKc_IRAK 583 850 - -
Hepe05g0231 904 SUPERFAMILY Protein kinase-like (PK-like) 564 850 IPR011009 -
Hepe05g0231 904 Gene3D Transferase(Phosphotransferase) domain 1 653 874 - -
Hepe05g0231 904 Gene3D Ribonuclease Inhibitor 368 507 IPR032675 -
Hepe05g0231 904 Pfam Protein tyrosine and serine/threonine kinase 579 782 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Hepe03g1197 Hepe-Chr3:66055806 Hepe05g0231 Hepe-Chr5:2722296 3.06e-116 dispersed
Hepe03g1501 Hepe-Chr3:71861458 Hepe05g0231 Hepe-Chr5:2722296 3.78e-110 dispersed
Hepe05g0231 Hepe-Chr5:2722296 Hepe10g1553 Hepe-Chr10:52258371 4.68e-289 dispersed
Hepe05g0225 Hepe-Chr5:2666946 Hepe05g0231 Hepe-Chr5:2722296 5.98e-70 proximal
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
72800 PF12819 Malectin_like 4.90E-76 CL0202 Hepe PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hepe05g0231 - - - 0.0