Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Hepe05g0247 ATGTTGAATTTCTCTCCCTTTTCCTCATCAATTTCCTTCATAATACTCCTAATTTCCTTTTTCAATTCCGCCGCCGCCGTCACGGAATTCGACTTCGGCACCGTCGCCCTCAGCAGCTTAACGCTCCTCGGAGATGCCCATTTGAACAACGGGAGCGTGAGGCTGACGCGCGACCTCGCCGTTCCCAACTCCGGCGCTGGCAGAGTCCTCTACGCCAAACCCATCAGATTCCGGCAGCCCGGGATTGCTTACCTCGCTAGCTTCTCCACATTTTTCTCCTTCTCCGTCTCGAATCTCAACCCGTCCTCGATTGGCGGCGGGTTGGCGTTTGTTATCTCGCCGGACGCCGATACGCTCGGCGGCGGCGGTGGGTTCTTGGGGTTGGCTGACGAAAGGGGATTGGGATTTGTGGCGGTGGAATTCGACACGTTGATGGATGTTGAATTTAAGGATATTAATGGGAACCATGTCGGGTTGGATCTGAACGAGATGGTTTCGGTGGAGGTTAAAGATCTGGACGGAATTGGAATTGATCTGAAAAGCGGCGATACGGTGAATTCGTGGATTGAATACGATGGGTCGGCTCGGATCTTCAAAATCTTTGTTTCGTATTCGAATTTGAAACCCACAGAGCCCTTATTGTCGTTGAATCTCGATCTCGATCCGTATTTGAACGATTTTATGTTCGTCGGATTTTCCGGTTCGACTCAGGGGAGTACTGAAGTTCACAGTGTGGATTGGTGGAGCTTTACGTCGTCGTTTGATTCAAATTCCCAACCTGGGTCGTTTCCGCCGCCGCCGACAACGACGCTGATGAACCCAACGGCTAATGTCGTACGGTCGCCTCCGCCGACCCAACCGCCGGCGGGGTCAGATTCCATCACGCAAAAGGACACCAAGTCACCGTCCTGCCATAATGGACTCTGCAAGCAAGGCGCCGGCGCGGTTGTCGGTGTAGTCACGGCGGGGGCGTTTGTTCTAGCGTTATTCGCCGGCGGATTAATTTGGGTTTATTCCAAAAAAATCAAACGGGTCAAGAAATCGGACTCCCTCGCTTCAGAATACATCAGAATGCCTAAAGAATTCAGTTATAAAGAGCTGAAAATCGCTACTAAATGCTTCAATTCGAATAGAATTATTGGGCATGGTGCTTTTGGGACTGTTTATAAAGGGATTCTGCCGGAGACCGGCGACATTGTGGCGGTGAAACGGTGTAGTCACAGTACACAAGGGAAGAATGAATTTCTGTCGGAACTTTCGATCATCGGAACTCTCCGCCACCGGAATTTAGTCCGGCTTCAAGGATGGTGTCACGAGAAAGGCGAGATTCTACTCGTTTATGATTTAATGCCAAATGGGAGTTTGGATAAAGCGCTTTTCGAGGCCAGAACGCCGCTGCCGTGGCCTCACCGGAGAAAAATTCTCCTCGGCGTCGCGTCGGCGTTGGCCTATTTGCATCAAGAATGTGAAAATCAAGTCATCCACAGAGATGTTAAAACCAGTAATATAATGTTGGATGAAGGATTCAATGCCCGATTAGGCGATTTCGGGTTGGCCCGACAAGTCGAGCACGATAAATCGCCGGACGCCACCGTTGCCGCCGGCACAATGGGGTATTTAGCGCCGGAATATCTCCTCACCGGACGTGCGACGGAAAAAACCGACGTGTTCAGTTTCGGCGCCGTCGTACTCGAAGTCGCCAGTGGCCGACGGCCGATTGAGAAAGAGACCGGAAGATTTGGCACGAACAGTAATTTAGTTGACTGGGTTTGGAGTTTACACCGGGAAGGGCGGTTGTTGACGGCGGCGGACGGGAGACTCGGCGTGGAGTTTGAGGAATCGGAGATGAGGAAAGTTTTGTTGGTCGGGTTAGCTTGTTCGCACCCGGATCCAATTACCCGACCCACAATGAGAGGCGTAGTGCAAATGTTAATCGGCGATTCAGAGATTCCGGTCGTTCCTCGGTCAAAGCCGTCAACGAGTTTCAGTACCGCTCATTTGCTTCTCACTTTACAAGACAGCGTGTCCGATCTCAACGGCATGATCGCCATTTCCACTTCCTCGTCTGAACACAGTTTCAAGGGCGAGGATTTGATCTCGCTGGATGATCGGACGGTGGGAAATCAATCAATCGTTTGA 2139 51.38 MLNFSPFSSSISFIILLISFFNSAAAVTEFDFGTVALSSLTLLGDAHLNNGSVRLTRDLAVPNSGAGRVLYAKPIRFRQPGIAYLASFSTFFSFSVSNLNPSSIGGGLAFVISPDADTLGGGGGFLGLADERGLGFVAVEFDTLMDVEFKDINGNHVGLDLNEMVSVEVKDLDGIGIDLKSGDTVNSWIEYDGSARIFKIFVSYSNLKPTEPLLSLNLDLDPYLNDFMFVGFSGSTQGSTEVHSVDWWSFTSSFDSNSQPGSFPPPPTTTLMNPTANVVRSPPPTQPPAGSDSITQKDTKSPSCHNGLCKQGAGAVVGVVTAGAFVLALFAGGLIWVYSKKIKRVKKSDSLASEYIRMPKEFSYKELKIATKCFNSNRIIGHGAFGTVYKGILPETGDIVAVKRCSHSTQGKNEFLSELSIIGTLRHRNLVRLQGWCHEKGEILLVYDLMPNGSLDKALFEARTPLPWPHRRKILLGVASALAYLHQECENQVIHRDVKTSNIMLDEGFNARLGDFGLARQVEHDKSPDATVAAGTMGYLAPEYLLTGRATEKTDVFSFGAVVLEVASGRRPIEKETGRFGTNSNLVDWVWSLHREGRLLTAADGRLGVEFEESEMRKVLLVGLACSHPDPITRPTMRGVVQMLIGDSEIPVVPRSKPSTSFSTAHLLLTLQDSVSDLNGMIAISTSSSEHSFKGEDLISLDDRTVGNQSIV 712
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 2915505 2918152 - Hsped.05g02470.1 Hepe05g0247 569512
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Hepe05g0247 712 ProSitePatterns Serine/Threonine protein kinases active-site signature. 493 505 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Hepe05g0247 712 CDD STKc_IRAK 380 644 - -
Hepe05g0247 712 PANTHER - 31 659 IPR050528 GO:0002229(PANTHER)|GO:0005886(PANTHER)
Hepe05g0247 712 FunFam L-type lectin-domain containing receptor kinase VIII.1 450 662 - -
Hepe05g0247 712 MobiDBLite consensus disorder prediction 258 301 - -
Hepe05g0247 712 FunFam L-type lectin-domain containing receptor kinase VIII.1 26 263 - -
Hepe05g0247 712 ProSitePatterns Protein kinases ATP-binding region signature. 380 403 IPR017441 GO:0005524(InterPro)
Hepe05g0247 712 Pfam Legume lectin domain 30 258 IPR001220 GO:0030246(InterPro)
Hepe05g0247 712 Gene3D - 26 262 - -
Hepe05g0247 712 Gene3D Phosphorylase Kinase; domain 1 336 449 - -
Hepe05g0247 712 Pfam Protein kinase domain 375 642 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Hepe05g0247 712 CDD lectin_legume_LecRK_Arcelin_ConA 28 254 IPR001220 GO:0030246(InterPro)
Hepe05g0247 712 SMART serkin_6 374 644 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Hepe05g0247 712 SUPERFAMILY Concanavalin A-like lectins/glucanases 26 263 IPR013320 -
Hepe05g0247 712 SUPERFAMILY Protein kinase-like (PK-like) 355 673 IPR011009 -
Hepe05g0247 712 ProSiteProfiles Protein kinase domain profile. 374 653 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Hepe05g0247 712 FunFam L-type lectin-domain containing receptor kinase VIII.1 338 449 - -
Hepe05g0247 712 ProSitePatterns Legume lectins beta-chain signature. 137 143 IPR019825 -
Hepe05g0247 712 Gene3D Transferase(Phosphotransferase) domain 1 450 650 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Hepe05g0247 Hepe-Chr5:2915505 Hepe07g0579 Hepe-Chr7:6253157 9.46e-122 dispersed
Hepe05g0247 Hepe-Chr5:2915505 Hepe06g0588 Hepe-Chr6:43230643 4.26e-206 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
72801 PF00069 Pkinase 1.00E-50 CL0016 Hepe PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hepe05g0247 - - - 0.0