Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Hepe05g0248 ATGGCGGCCAAGAACCATTATTTGAGCCTTCTTCTTCTTCTCCTTTTGCAGCTCTTTTATTCAGGAAGGGGCGAATTGCAAATAAATTATTATGCAAAAAGTTGCCCAAAAGCTGAAGAAATTATAAAACAGCAAGTTGTGGATCTCTACTATGAACATGGAAACACTGCTGTTTCTTGGGTCAGAAATCTCTTCCATGATTGTGTTGTTCAGGCGTGTGATGCATCTTTACTATTGGAGACGGTAACGGGAGTGGAATCGGAGAAAGATTCCGACAGAAGTTTTGGAATGAGAAATTTCAAATACATAACAAAGATCAAAGCGGCTGTTGAACAAGAATGTCCTCAAACTGTTTCTTGTGCAGATATTGTTGCCCTATCTGCTAGAGATGGCATAGTTATGTTAAAAGGGCCTCATATAGAGTTGAAAACTGGGAGAAGAGATAGCAAGGTGAGCTATTCAAATCTTGTTGAACAATTGGTCCCGAAACACAACGAATCGCTCGGCATTTGCCTTCAACCAAAAGGAGCTCACTCAGTTGGTCGAGTTCACTGTGTCAACTTAGTCGATAAGCTATATCCAACCGTTGATCCAACATTCAATCCAGACTATGCGAAATACTTAAAAGGGCGATGCCCGACGCCAAATCCCGACCCAGATGCAGTATTATATTCAAGAAACGATCGGGTGACGACGATGATTCTTGATAATGTGTACTACAGCAATGCACTGAAACAAAAGGGATTGCTGGTTGTGGACCGAGAATTGGTTTCTAATCCTCTCACTCTTCCATATGTCAAGAAATTTGCAGCTGATAATCAATACTTTCATGCCCAATTCTCTAGGGGAATTCGTTTGTTGTCTGAGAATAATCCCCTCACTGAAGATCAAGGGGAGATTAGGAAAGATTGTCGGTTTGTTAATTAA 927 40.88 MAAKNHYLSLLLLLLLQLFYSGRGELQINYYAKSCPKAEEIIKQQVVDLYYEHGNTAVSWVRNLFHDCVVQACDASLLLETVTGVESEKDSDRSFGMRNFKYITKIKAAVEQECPQTVSCADIVALSARDGIVMLKGPHIELKTGRRDSKVSYSNLVEQLVPKHNESLGICLQPKGAHSVGRVHCVNLVDKLYPTVDPTFNPDYAKYLKGRCPTPNPDPDAVLYSRNDRVTTMILDNVYYSNALKQKGLLVVDRELVSNPLTLPYVKKFAADNQYFHAQFSRGIRLLSENNPLTEDQGEIRKDCRFVN 308
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 2926138 2929235 - Hsped.05g02480.1 Hepe05g0248 569513
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Hepe05g0248 308 SUPERFAMILY Heme-dependent peroxidases 25 308 IPR010255 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Hepe05g0248 308 FunFam Peroxidase 29 172 - -
Hepe05g0248 308 Pfam Peroxidase 43 168 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Hepe05g0248 308 Pfam Peroxidase 176 272 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Hepe05g0248 308 CDD secretory_peroxidase 25 307 IPR033905 GO:0004601(InterPro)|GO:0042744(InterPro)
Hepe05g0248 308 PRINTS Plant peroxidase signature 226 241 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Hepe05g0248 308 PRINTS Plant peroxidase signature 59 79 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Hepe05g0248 308 PRINTS Plant peroxidase signature 117 127 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Hepe05g0248 308 PRINTS Plant peroxidase signature 242 259 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Hepe05g0248 308 PRINTS Plant peroxidase signature 98 111 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Hepe05g0248 308 PRINTS Plant peroxidase signature 35 54 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Hepe05g0248 308 PRINTS Plant peroxidase signature 136 151 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Hepe05g0248 308 Gene3D Peroxidase, domain 2 175 288 - -
Hepe05g0248 308 ProSiteProfiles Plant heme peroxidase family profile. 25 308 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Hepe05g0248 308 PRINTS Haem peroxidase superfamily signature 136 148 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Hepe05g0248 308 PRINTS Haem peroxidase superfamily signature 118 135 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Hepe05g0248 308 PRINTS Haem peroxidase superfamily signature 57 71 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Hepe05g0248 308 PRINTS Haem peroxidase superfamily signature 228 243 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Hepe05g0248 308 Gene3D - 26 171 - -
Hepe05g0248 308 PANTHER - 11 308 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Hepe05g0248 308 Gene3D - 289 305 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Hepe05g0248 Hepe-Chr5:2926138 Hepe07g0701 Hepe-Chr7:8393147 1.64e-57 dispersed
Hepe07g2034 Hepe-Chr7:64542245 Hepe05g0248 Hepe-Chr5:2926138 8.86e-113 transposed
Hepe04g0919 Hepe-Chr4:63480861 Hepe05g0248 Hepe-Chr5:2926138 3.89e-97 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hepe05g0248 K00430 - csv:101215428 518.079