Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Hepe05g0256 ATGCCGAACCACGACATGGAAATCGGACTCGGAGGTGTTGGGTCGACGTCGAGGAGGGATTATTTCGACCCGCTGCCGGCGCCGATGATCGACATGGAGGAGTTCGTCAAATGGTCGTTTTACAGAGCTATAATCGCCGAGTTTATGGCCACTCTGTTGTTTCTGTTCGTCTCCGTTTTGACGGTCATCGGAAATCAAACCCAGACGGATCCTCTCAACGGCGGGAATGTCTGCGGCGGAGTTGGCATCCTCGGAATCTCTTGGGTCTTCGGCGGTATGATCTTCGTCCTCGTTTACTGCACGGCGGGTATCTCTGGAGGGCACATAAATCCGGCGGTGACATTCGGAATGCTTTTGATGAGAAAGATATCGCTGGTCCGCGCCGTACTGTACATAATAGCTCAGTGCGTGGGGGCGTTGTGCGGCTGCGCCCTTGTGAAGGCATTGCATAAGGATCGCTACAACCACTACGGCGGCGCCGCCAACCTTCTCGCCGACGACTACAGCAAAGGCGCAGGCCTCGCCGTCGAGATCGTAGGCACCTTCGTCCTTCTCTACATCGTCTTCTCCGCCACCGATCCCAAACGTAATGCCAGAGATTCCTATGTTCCGGTGTTGGCTCCACTGCCTATTGGGTTTGCTGTATTCATGGTTCACCTTGCTACAATTCCGATCACCGGCACCGGCATCAACCCTGCTCGGAGCTTCGGTGCCGCTGTGATCATCAACGATAAAAGAGTTTGGAAAGATCATTGGATTTTTTGGGCAGGGCCGTTGATCGGAGCAACTATTGCTGCAATGTATTACCAATATGTTCTTCGAGCTGCTGCTGTGAAAGCAATTGGATCTTTCAGAAGTTCGCCGCACACTCGCTACTAA 879 53.36 MPNHDMEIGLGGVGSTSRRDYFDPLPAPMIDMEEFVKWSFYRAIIAEFMATLLFLFVSVLTVIGNQTQTDPLNGGNVCGGVGILGISWVFGGMIFVLVYCTAGISGGHINPAVTFGMLLMRKISLVRAVLYIIAQCVGALCGCALVKALHKDRYNHYGGAANLLADDYSKGAGLAVEIVGTFVLLYIVFSATDPKRNARDSYVPVLAPLPIGFAVFMVHLATIPITGTGINPARSFGAAVIINDKRVWKDHWIFWAGPLIGATIAAMYYQYVLRAAAVKAIGSFRSSPHTRY 292
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 3034094 3039863 - Hsped.05g02560.1 Hepe05g0256 569521
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Hepe05g0256 292 CDD MIP 42 272 IPR000425 GO:0015267(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro)
Hepe05g0256 292 NCBIfam MIP family channel protein 46 269 IPR000425 GO:0015267(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro)
Hepe05g0256 292 PANTHER AQUAPORIN OR AQUAGLYCEROPORIN RELATED 16 286 IPR034294 GO:0005886(PANTHER)|GO:0015250(PANTHER)
Hepe05g0256 292 ProSitePatterns MIP family signature. 108 116 IPR022357 -
Hepe05g0256 292 Gene3D Glycerol uptake facilitator protein. 27 290 IPR023271 -
Hepe05g0256 292 FunFam Probable aquaporin PIP1-2 27 288 - -
Hepe05g0256 292 SUPERFAMILY Aquaporin-like 33 274 IPR023271 -
Hepe05g0256 292 PRINTS Major intrinsic protein family signature 176 194 IPR000425 GO:0015267(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro)
Hepe05g0256 292 PRINTS Major intrinsic protein family signature 212 234 IPR000425 GO:0015267(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro)
Hepe05g0256 292 PRINTS Major intrinsic protein family signature 252 272 IPR000425 GO:0015267(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro)
Hepe05g0256 292 PRINTS Major intrinsic protein family signature 42 61 IPR000425 GO:0015267(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro)
Hepe05g0256 292 PRINTS Major intrinsic protein family signature 127 146 IPR000425 GO:0015267(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro)
Hepe05g0256 292 PRINTS Major intrinsic protein family signature 90 114 IPR000425 GO:0015267(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro)
Hepe05g0256 292 Pfam Major intrinsic protein 35 269 IPR000425 GO:0015267(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Hepe05g0256 Hepe-Chr5:3034094 Hepe08g0300 Hepe-Chr8:2705016 3.21e-136 dispersed
Hepe01g1025 Hepe-Chr1:74942416 Hepe05g0256 Hepe-Chr5:3034094 3.12e-145 wgd
Hepe02g2960 Hepe-Chr2:78862804 Hepe05g0256 Hepe-Chr5:3034094 1.60e-144 wgd
Hepe04g0928 Hepe-Chr4:63560610 Hepe05g0256 Hepe-Chr5:3034094 2.82e-135 wgd
Hepe05g0256 Hepe-Chr5:3034094 Hepe08g0886 Hepe-Chr8:8024237 2.96e-145 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hepe05g0256 K09872 - csv:101214142 486.493