Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Hepe05g0256 | ATGCCGAACCACGACATGGAAATCGGACTCGGAGGTGTTGGGTCGACGTCGAGGAGGGATTATTTCGACCCGCTGCCGGCGCCGATGATCGACATGGAGGAGTTCGTCAAATGGTCGTTTTACAGAGCTATAATCGCCGAGTTTATGGCCACTCTGTTGTTTCTGTTCGTCTCCGTTTTGACGGTCATCGGAAATCAAACCCAGACGGATCCTCTCAACGGCGGGAATGTCTGCGGCGGAGTTGGCATCCTCGGAATCTCTTGGGTCTTCGGCGGTATGATCTTCGTCCTCGTTTACTGCACGGCGGGTATCTCTGGAGGGCACATAAATCCGGCGGTGACATTCGGAATGCTTTTGATGAGAAAGATATCGCTGGTCCGCGCCGTACTGTACATAATAGCTCAGTGCGTGGGGGCGTTGTGCGGCTGCGCCCTTGTGAAGGCATTGCATAAGGATCGCTACAACCACTACGGCGGCGCCGCCAACCTTCTCGCCGACGACTACAGCAAAGGCGCAGGCCTCGCCGTCGAGATCGTAGGCACCTTCGTCCTTCTCTACATCGTCTTCTCCGCCACCGATCCCAAACGTAATGCCAGAGATTCCTATGTTCCGGTGTTGGCTCCACTGCCTATTGGGTTTGCTGTATTCATGGTTCACCTTGCTACAATTCCGATCACCGGCACCGGCATCAACCCTGCTCGGAGCTTCGGTGCCGCTGTGATCATCAACGATAAAAGAGTTTGGAAAGATCATTGGATTTTTTGGGCAGGGCCGTTGATCGGAGCAACTATTGCTGCAATGTATTACCAATATGTTCTTCGAGCTGCTGCTGTGAAAGCAATTGGATCTTTCAGAAGTTCGCCGCACACTCGCTACTAA | 879 | 53.36 | MPNHDMEIGLGGVGSTSRRDYFDPLPAPMIDMEEFVKWSFYRAIIAEFMATLLFLFVSVLTVIGNQTQTDPLNGGNVCGGVGILGISWVFGGMIFVLVYCTAGISGGHINPAVTFGMLLMRKISLVRAVLYIIAQCVGALCGCALVKALHKDRYNHYGGAANLLADDYSKGAGLAVEIVGTFVLLYIVFSATDPKRNARDSYVPVLAPLPIGFAVFMVHLATIPITGTGINPARSFGAAVIINDKRVWKDHWIFWAGPLIGATIAAMYYQYVLRAAAVKAIGSFRSSPHTRY | 292 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
5 | 3034094 | 3039863 | - | Hsped.05g02560.1 | Hepe05g0256 | 569521 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Hepe05g0256 | 292 | CDD | MIP | 42 | 272 | IPR000425 | GO:0015267(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro) | |
Hepe05g0256 | 292 | NCBIfam | MIP family channel protein | 46 | 269 | IPR000425 | GO:0015267(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro) | |
Hepe05g0256 | 292 | PANTHER | AQUAPORIN OR AQUAGLYCEROPORIN RELATED | 16 | 286 | IPR034294 | GO:0005886(PANTHER)|GO:0015250(PANTHER) | |
Hepe05g0256 | 292 | ProSitePatterns | MIP family signature. | 108 | 116 | IPR022357 | - | |
Hepe05g0256 | 292 | Gene3D | Glycerol uptake facilitator protein. | 27 | 290 | IPR023271 | - | |
Hepe05g0256 | 292 | FunFam | Probable aquaporin PIP1-2 | 27 | 288 | - | - | |
Hepe05g0256 | 292 | SUPERFAMILY | Aquaporin-like | 33 | 274 | IPR023271 | - | |
Hepe05g0256 | 292 | PRINTS | Major intrinsic protein family signature | 176 | 194 | IPR000425 | GO:0015267(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro) | |
Hepe05g0256 | 292 | PRINTS | Major intrinsic protein family signature | 212 | 234 | IPR000425 | GO:0015267(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro) | |
Hepe05g0256 | 292 | PRINTS | Major intrinsic protein family signature | 252 | 272 | IPR000425 | GO:0015267(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro) | |
Hepe05g0256 | 292 | PRINTS | Major intrinsic protein family signature | 42 | 61 | IPR000425 | GO:0015267(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro) | |
Hepe05g0256 | 292 | PRINTS | Major intrinsic protein family signature | 127 | 146 | IPR000425 | GO:0015267(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro) | |
Hepe05g0256 | 292 | PRINTS | Major intrinsic protein family signature | 90 | 114 | IPR000425 | GO:0015267(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro) | |
Hepe05g0256 | 292 | Pfam | Major intrinsic protein | 35 | 269 | IPR000425 | GO:0015267(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro) |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Hepe05g0256 | Hepe-Chr5:3034094 | Hepe08g0300 | Hepe-Chr8:2705016 | 3.21e-136 | dispersed | |
Hepe01g1025 | Hepe-Chr1:74942416 | Hepe05g0256 | Hepe-Chr5:3034094 | 3.12e-145 | wgd | |
Hepe02g2960 | Hepe-Chr2:78862804 | Hepe05g0256 | Hepe-Chr5:3034094 | 1.60e-144 | wgd | |
Hepe04g0928 | Hepe-Chr4:63560610 | Hepe05g0256 | Hepe-Chr5:3034094 | 2.82e-135 | wgd | |
Hepe05g0256 | Hepe-Chr5:3034094 | Hepe08g0886 | Hepe-Chr8:8024237 | 2.96e-145 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Hepe05g0256 | K09872 | - | csv:101214142 | 486.493 |