Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Hepe05g0274 ATGTCACAAGATTCTGAGGAGATAAAGACGAGCGAGCAGTGGAAATGGTCCGAAATGCAAGGCCTTGAGCTCGTCTCTTCTCCTCCTCAATCATCACTTATAATCAACAACAACAACAACCCTGAAGACGGAATTGACAGAGCCCCAACTGGAGAAATGGACTCTTCTTCTACAACTGATTCCAAGAAGGAAACCGCCGGTGGCGCCACCGTGGAGAAGCCCGAGGCTATCACCGCCGTTGGGTTTGGCCAGCTTTTCAGATTCGCCGATGGGTTGGATCATATTTTGATGGCAATTGGGTCGGTCGGAGCTCTTGTCCACGGTTGTTCTTTGCCTCTGTTTCTCAGATTCTTCGCTGATCTTGTTAACTCTTTTGGGTCTTACGCTAATGATGTGGATAAAATGATGCAGGAGGTTTTGAAGTACGCATTCTACTTTCTTGTGGTTGGAGCTGCGATTTGGGCGTCATCTTGGGCAGAGATTTCATGTTGGATGTGGACCGGCGAGCGGCAGTCCACAAAGATGAGGATCAAGTACCTAGAAGCAGCACTGGACCAGGACATTCAGTATTTTGACACAGAGGTGAGAACATCCGACGTCGTTTTCGCCATCAACACTGACGCAGTGATGGTCCAAGACGCCATTAGTGAGAAGTTGGGCAATTTTATCCACTATATGGCAACTTTTGTGTCCGGATTCGTTGTGGGTTTTACTGCTGTGTGGCAATTGGCTTTGGTAACTCTTGCGGTGGTTCCTCTGATTGCTGTAATCGGCGGCATCTACGCCACCACCATAGCTAAGCTCACTGCCAAGACTCAGGAAGCTCTTTCAGAAGCTGGGAATACCGTCGAACAGACAATAGTTCAAATTCGAGTCGTCTTTTCGTACGTTGGCGAATCGAGAGCATTACAGAGATACTCCTCTGCATTGAAGATTTCTCAAAAGATAGGTTACAAGAGTGGATTCTCCAAGGGTATGGGATTGGGGGCCACTTACTTTGTTGTATTCTGCTGCTATGCTCTTCTGCTCTGGTATGGAGGTTATCTTGTTAGACATAACGCCACCAATGGCGGTCTTGCTATTGCCACCATGTTTGCAGTGATGATTGGCGGACTGGCATTGGGGCAATCTGCACCAAGCATGAGTTCATTCGCTAAGGCTAAAGTTGCAGCTGCCAAAATCTACCGTATAATCGACCATAAGCCTACTCTAAACCGCAACAACGAATCTGGTTTGGAATTGGAGTCAGTTTCAGGACTGGTTGAGCTGAAGAATGTAGATTTCTCATACCCCTCAAGGCCCGATGTAAGAATCCTCAACAATTTCTCTCTAACTGTCCCTGCCGGAAAAACTATAGCTCTGGTCGGTAGCAGTGGCTCCGGCAAGAGCACCGTTGTCTCCCTAATTGAAAGATTCTATGACCCCAGTTCAGGTGAAGTTCTACTAGATGGGCGTGACATAAAAACTTTGAAGCTAAAATGGTTAAGGCAGCAGATAGGACTGGTGAGCCAAGAACCTGCTCTTTTTGCCACCACCATCAAGGAGAATATTCTCTTGGGCAGACCTGATGCAGACCAACTTGAGGTCGAGGAAGCTGCTCGAGTCGCCAATGCTCATTCATTCATTATCAAACTTCCTGAAGGCTATGACACCCAGGTAGGGGAAAGAGGACTGCAGCTTTCTGGGGGGCAGAAGCAGAGGATTGCAATAGCAAGGGCAATGCTGAAAAATCCTGCAATCCTACTCTTAGATGAGGCGACTAGTGCGTTGGACTCTGAGTCGGAAAAGCTTGTACAGGAGGCTCTTGATCGTTTTATGATCGGACGGACCACTCTTGTTATTGCCCATCGCCTCTCTACCATTCGCAAGGCTGACCTTGTTGCTGTTCTCCAACAAGGAAGTGTTTCCGAAATCGGAACACATGACGAGCTCTTTGCTAAAGGAGAGAATGGTGTATATGCCAAGCTCATCCGAATGCAGGAGATGGCACATGAAACTGCTCTCAATAATGCCAGAAAGAGTAGTGCAAGGCCTTCAAGTGCCAGGAACTCGGTGAGCTCCCCAATCATTGCACGGAATTCTTCCTATGGACGATCGCCATATTCACGTCGTTTATCTGACTTCTCCACATCTGATTTTAGTCTTTCTCTGGATGCTTCACTTCCCAATTACAGGCTTGAAAAACTTGCCTTTAAGGAGCAGGCCAGTTCCTTCTGGCGTCTCGTGAAAATGAATTCACCCGAATGGCTTTATGCATTACTTGGTTCTATTGGTTCTGTTGTTTGTGGGTTTTTAAGTGCCTTCTTCGCATACGTTCTAAGTGCTGTTCTCAGTGTATATTACAACCCAGACCATGCTTTCATGAGCAGAGAAATTATTAAGTACTGTTACTTATTAATCGGACTTTCATCAGCTGCTCTTCTCTTCAATACAATACAGCATTTCTTCTGGGATATTGTGGGAGAGAACCTCACCAAACGTGTAAGAGAGAAGATGCTGACAGCAGTACTGAAAAATGAAATGGCATGGTTTGATCAGGAAGAAAATGAGAGTGCAAAGATTGCTGCAAGGCTGGCCCTCGACGCTAACAACGTCAGATCAGCCATTGGAGACAGGATTTCTGTGATTGTACAGAACACATCACTCATGCTAGTAGCATGCACTGCCGGGTTTGTTTTGCAGTGGCGCCTATCTCTTGTCCTTGTAGCCGTCTTCCCCGTGGTTGTTGCAGCCACTGTTCTACAGAAGATGTTCATGACTGGTTTTTCAGGAGACCTTGAGGCCAACCATGCCAAGGCCACACAACTAGCAGGGGAGGCCATAGCCAATGTAAGGACAGTTGCTGCGTTCAACTCAGAGGAAAAGATTGTCAGACTGTTCTCAACCAACCTAGAGATCCCACTACGACGCTGCTTTTGGAAGGGACAGATTGCCGGTAGCGGATTTGGCGTTGCTCAGTTCTCTCTTTACGCTTCCTATGCTCTGGGTCTTTGGTATGCCTCATGGCTTGTAAAGCATGGGCTATCTGACTTTTCAAAGGCAATCCGTGTTTTCATGGTCCTTATGGTTTCTGCAAATGGTGCAGCTGAAACACTCACTCTGGCTCCCGACTTTATTAAGGGTGGACGAGCTATGCGTTCAGTGTTTTCACTTCTTGACCGCAAAACTGAAATCGAACCTGATGATGCAGATGCCACCCCAGTCCCAGATAAACTTCGTGGAGAAGTTGAATTTAAACATGTTGACTTTTCCTACCCAACTCGTCCTGATATCCCTGTCTTCAGAGACCTCAGTTTGCGTGCTCGAGCAGGTAAGACTCTTGCTCTTGTTGGTCCTAGCGGGTGTGGCAAGAGCTCTGTTATTGCACTAGTCCAAAGATTCTACGAGCCAACATCAGGACGAGTTATGATTGATGGAAAGGATATTCGCAAGTTCAATCTCAAGTCCATGAGAAAGCATATTGCAATGGTCCCTCAGGAGCCATGCTTATTCGCTGCTTCCATATATGAAAATATAGCTTATGGCCACGAATCAGCGACCGAGGCCGAGATCGTTGAAGCCGCTACTTTGGCGAATGCCCATAAGTTCATATCCGCATTGCCAGAAGGATATAAAACATTTGTTGGCGAGAGGGGAGTTCAACTATCAGGTGGACAGAAACAAAGAATTGCAATTGCCCGTGCTCTGATCAGAAAGGCAGAGCTTATGCTACTAGATGAGGCAACAAGTGCACTGGACGCCGAGTCAGAGCGATCCGTCCAGGAGGCTCTCGAACGAGCTTGTTCGGGAAAAACAACAATCGTAGTTGCTCATCGACTATCAACAATCAGGAATGCCCATGTCATTGCAGTAATTGACGACGGTAAAGTAGCAGAGCAGGGATCACACTCACATTTATTGAAAAATTATCCTGATGGGTGTTACTCTCGGATGATACAATTACAAAGATTCACACACAGCCAAGTCATTGGTATGACATCAGGTTCAACTTCCTCAGCGAGAACAACTAAAGAGGATGAGGACAGAGAGAGCTAG 4035 46.79 MSQDSEEIKTSEQWKWSEMQGLELVSSPPQSSLIINNNNNPEDGIDRAPTGEMDSSSTTDSKKETAGGATVEKPEAITAVGFGQLFRFADGLDHILMAIGSVGALVHGCSLPLFLRFFADLVNSFGSYANDVDKMMQEVLKYAFYFLVVGAAIWASSWAEISCWMWTGERQSTKMRIKYLEAALDQDIQYFDTEVRTSDVVFAINTDAVMVQDAISEKLGNFIHYMATFVSGFVVGFTAVWQLALVTLAVVPLIAVIGGIYATTIAKLTAKTQEALSEAGNTVEQTIVQIRVVFSYVGESRALQRYSSALKISQKIGYKSGFSKGMGLGATYFVVFCCYALLLWYGGYLVRHNATNGGLAIATMFAVMIGGLALGQSAPSMSSFAKAKVAAAKIYRIIDHKPTLNRNNESGLELESVSGLVELKNVDFSYPSRPDVRILNNFSLTVPAGKTIALVGSSGSGKSTVVSLIERFYDPSSGEVLLDGRDIKTLKLKWLRQQIGLVSQEPALFATTIKENILLGRPDADQLEVEEAARVANAHSFIIKLPEGYDTQVGERGLQLSGGQKQRIAIARAMLKNPAILLLDEATSALDSESEKLVQEALDRFMIGRTTLVIAHRLSTIRKADLVAVLQQGSVSEIGTHDELFAKGENGVYAKLIRMQEMAHETALNNARKSSARPSSARNSVSSPIIARNSSYGRSPYSRRLSDFSTSDFSLSLDASLPNYRLEKLAFKEQASSFWRLVKMNSPEWLYALLGSIGSVVCGFLSAFFAYVLSAVLSVYYNPDHAFMSREIIKYCYLLIGLSSAALLFNTIQHFFWDIVGENLTKRVREKMLTAVLKNEMAWFDQEENESAKIAARLALDANNVRSAIGDRISVIVQNTSLMLVACTAGFVLQWRLSLVLVAVFPVVVAATVLQKMFMTGFSGDLEANHAKATQLAGEAIANVRTVAAFNSEEKIVRLFSTNLEIPLRRCFWKGQIAGSGFGVAQFSLYASYALGLWYASWLVKHGLSDFSKAIRVFMVLMVSANGAAETLTLAPDFIKGGRAMRSVFSLLDRKTEIEPDDADATPVPDKLRGEVEFKHVDFSYPTRPDIPVFRDLSLRARAGKTLALVGPSGCGKSSVIALVQRFYEPTSGRVMIDGKDIRKFNLKSMRKHIAMVPQEPCLFAASIYENIAYGHESATEAEIVEAATLANAHKFISALPEGYKTFVGERGVQLSGGQKQRIAIARALIRKAELMLLDEATSALDAESERSVQEALERACSGKTTIVVAHRLSTIRNAHVIAVIDDGKVAEQGSHSHLLKNYPDGCYSRMIQLQRFTHSQVIGMTSGSTSSARTTKEDEDRES 1344
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 3304153 3310328 - Hsped.05g02740.1 Hepe05g0274 569539
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Hepe05g0274 1344 MobiDBLite consensus disorder prediction 51 65 - -
Hepe05g0274 1344 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 412 660 IPR027417 -
Hepe05g0274 1344 CDD ABC_6TM_Pgp_ABCB1_D2_like 743 1058 - -
Hepe05g0274 1344 FunFam ABC transporter B family member 19 1042 1064 - -
Hepe05g0274 1344 ProSitePatterns ABC transporters family signature. 1215 1229 IPR017871 GO:0005524(InterPro)|GO:0016887(InterPro)
Hepe05g0274 1344 Pfam ABC transporter 1095 1243 IPR003439 GO:0005524(InterPro)|GO:0016887(InterPro)
Hepe05g0274 1344 CDD ABC_MTABC3_MDL1_MDL2 421 660 - -
Hepe05g0274 1344 SUPERFAMILY ABC transporter transmembrane region 740 1060 IPR036640 GO:0005524(InterPro)|GO:0016020(InterPro)
Hepe05g0274 1344 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1068 1315 IPR027417 -
Hepe05g0274 1344 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 98 386 IPR011527 GO:0005524(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro)|GO:0140359(InterPro)
Hepe05g0274 1344 SMART AAA_5 1103 1295 IPR003593 GO:0016887(InterPro)
Hepe05g0274 1344 SMART AAA_5 448 634 IPR003593 GO:0016887(InterPro)
Hepe05g0274 1344 Gene3D - 411 661 IPR027417 -
Hepe05g0274 1344 Gene3D - 1065 1316 IPR027417 -
Hepe05g0274 1344 ProSitePatterns ABC transporters family signature. 560 574 IPR017871 GO:0005524(InterPro)|GO:0016887(InterPro)
Hepe05g0274 1344 Gene3D ABC transporter type 1, transmembrane domain 719 921 IPR036640 GO:0005524(InterPro)|GO:0016020(InterPro)
Hepe05g0274 1344 MobiDBLite consensus disorder prediction 1324 1344 - -
Hepe05g0274 1344 Pfam ABC transporter transmembrane region 99 370 IPR011527 GO:0005524(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro)|GO:0140359(InterPro)
Hepe05g0274 1344 Pfam ABC transporter transmembrane region 755 1023 IPR011527 GO:0005524(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro)|GO:0140359(InterPro)
Hepe05g0274 1344 FunFam ABC transporter B family member 1 84 419 - -
Hepe05g0274 1344 FunFam ABC transporter B family member 1 1066 1316 - -
Hepe05g0274 1344 CDD ABC_6TM_Pgp_ABCB1_D1_like 97 384 - -
Hepe05g0274 1344 Gene3D ABC transporter type 1, transmembrane domain 975 1319 IPR036640 GO:0005524(InterPro)|GO:0016020(InterPro)
Hepe05g0274 1344 FunFam ABC transporter B family member 1 411 661 - -
Hepe05g0274 1344 MobiDBLite consensus disorder prediction 27 44 - -
Hepe05g0274 1344 SUPERFAMILY ABC transporter transmembrane region 85 399 IPR036640 GO:0005524(InterPro)|GO:0016020(InterPro)
Hepe05g0274 1344 CDD ABC_MTABC3_MDL1_MDL2 1076 1315 - -
Hepe05g0274 1344 PANTHER ABC TRANSPORTER B FAMILY 59 685 IPR039421 GO:0005887(PANTHER)|GO:0042626(PANTHER)
Hepe05g0274 1344 Pfam ABC transporter 439 588 IPR003439 GO:0005524(InterPro)|GO:0016887(InterPro)
Hepe05g0274 1344 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 1076 1312 IPR003439 GO:0005524(InterPro)|GO:0016887(InterPro)
Hepe05g0274 1344 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 753 1040 IPR011527 GO:0005524(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro)|GO:0140359(InterPro)
Hepe05g0274 1344 Gene3D ABC transporter type 1, transmembrane domain 84 673 IPR036640 GO:0005524(InterPro)|GO:0016020(InterPro)
Hepe05g0274 1344 MobiDBLite consensus disorder prediction 27 70 - -
Hepe05g0274 1344 FunFam ABC transporter B family member 1 732 1041 - -
Hepe05g0274 1344 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 421 657 IPR003439 GO:0005524(InterPro)|GO:0016887(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Hepe02g3008 Hepe-Chr2:79238712 Hepe05g0274 Hepe-Chr5:3304153 1.44e-319 dispersed
Hepe02g3161 Hepe-Chr2:81066316 Hepe05g0274 Hepe-Chr5:3304153 0.0 dispersed
Hepe03g1405 Hepe-Chr3:70711525 Hepe05g0274 Hepe-Chr5:3304153 4.19e-318 dispersed
Hepe05g0274 Hepe-Chr5:3304153 Hepe06g1791 Hepe-Chr6:68964883 0.0 dispersed
Hepe05g0274 Hepe-Chr5:3304153 Hepe04g1957 Hepe-Chr4:74438956 0.0 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hepe05g0274 K05658 - csv:101220974 2370.12