Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Hepe05g0275 ATGGCGATCCCAATGGGCAAATCTTTCAACCCCCAATCGCAGATTTACACTTCCCCTCGTCCCCCAATCAACTTTCCGACCGACCCCACAATCTCCATTTCTTCCTTCCTCTTTCAAAACTCCTCCTTTTTCCCTCACACCCTCGCCCTCGCCGACGCCGATTCCGGCGAATCCTTAACTTTCCGTCAGCTTCAAATCCAAGTCTCCAAGTTATCCCATGTCTTCTTCCAACTGGGTATTCGAAAAACCGATGTGGTTTTAATATTCGCGCCTAATTCCATTCATTTCCCTGTTTGTTTCCTCGCCATCGTCGCCATTGGAGCCATCGCCACCACTTGTAATCCTGCTTACACCTTCGCTGAACTCTCAAAGCAAGTCCAAAACTGCAACCCCAAGCTCGTAATCACCGTTCCTGAACTCTGGGATGTAATCGGTAAACTCGATTTGCCTTCTATAATTCTGGGTTCTGCAATTTCTTCAAAATTTTCCCGTCCCAACATCTGGGGTTACTTCGATTTGATTGAAAACGCCGGCGATGTGTCCAATTTGCAGGCGAATCAAGTGGGTCAGAGCGATGTAGCGGCTCTTTTGTATTCATCGGGGACAACTGGGATTAGCAAGGGAGTGATTCTGACTCACAGGAACTTCATAACGACGGTGTTAATGGTGACTCGTGATCAGGACCTTCTTGGCGATCCTAGAAACGTGTTTTTGTGCTTTCTCCCGATGTTTCATGTCTTTGGTCTCTCTGTGATTCTTTACTCGCAGCTTCAAAGAGGAAACACCGTCGTTTCAATGGCGAAGTTTGAGCTGGAGAAGGCTTTAAGGGTGGTGATGAAGTACAAGATCACTCATCTTTATCTTGTTCCTCCTGTAATTATAGCTCTGACGAAGCAAAGTGTAGTGAAGAAGTATGATTTGTCTTCTTTGAAGCAGATTTTATCTGGGGCGGCGCCTCTTGGGAAGGACGTGATGGAAGAATGCTCTAAGATTATACCTCAGGCCAAGATCATTCAGGGATATGGTATGACAGAAACTTGTGGAGTTATTTCAATAGAGAATCCGGGGGTAGAATCTACGCTATCTGGATCAACTGGATTCCTTGTTTCAGGAGTTGAAGCCCAAATTTTGAGTACAGAAACACAGAAACGTCTTCCACCAGGTGAAACAGGGGAAATATGCGTCCGAGGACCAAATATGATGAAAGGGTATTTCAACAATCAGAAAGCCACCAGAGAAACTATAGATGATCAAGGATGGGTACATACTGGAGATATCGGATATTTCAATGAAGAAGGAGAATTATTTGTCGTGGACAGAATCAAAGAACTCATCAAGTGCTATGGTTTTCAGGTTGCACCAGCGGAGCTTGAAGCACTGCTACTTTCTCACCCTCAAATAGTAGATGCGATTGTGATCCCATACCCGGATGATAAAGGCGGTGAGGTCCCTATCGCATTTGTTGTTCGTTCGCCGAATAGTTCGATAAAGGAAGAAGATGTTAAAAGTTTTATTGCAGGGCAGGTTGCACCATTCAAGAGATTAAAAAGAGTAACCTTCACGAGTAGTGTTCCGAAGTCGGCTGCAGGAAAACTTCTGAGAAGGGAGCTCATAGCACAAGTCCGTGCCAAGATGTAG 1638 45.24 MAIPMGKSFNPQSQIYTSPRPPINFPTDPTISISSFLFQNSSFFPHTLALADADSGESLTFRQLQIQVSKLSHVFFQLGIRKTDVVLIFAPNSIHFPVCFLAIVAIGAIATTCNPAYTFAELSKQVQNCNPKLVITVPELWDVIGKLDLPSIILGSAISSKFSRPNIWGYFDLIENAGDVSNLQANQVGQSDVAALLYSSGTTGISKGVILTHRNFITTVLMVTRDQDLLGDPRNVFLCFLPMFHVFGLSVILYSQLQRGNTVVSMAKFELEKALRVVMKYKITHLYLVPPVIIALTKQSVVKKYDLSSLKQILSGAAPLGKDVMEECSKIIPQAKIIQGYGMTETCGVISIENPGVESTLSGSTGFLVSGVEAQILSTETQKRLPPGETGEICVRGPNMMKGYFNNQKATRETIDDQGWVHTGDIGYFNEEGELFVVDRIKELIKCYGFQVAPAELEALLLSHPQIVDAIVIPYPDDKGGEVPIAFVVRSPNSSIKEEDVKSFIAGQVAPFKRLKRVTFTSSVPKSAAGKLLRRELIAQVRAKM 545
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 3364903 3369242 - Hsped.05g02750.1 Hepe05g0275 569540
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Hepe05g0275 545 ProSitePatterns Putative AMP-binding domain signature. 196 207 IPR020845 -
Hepe05g0275 545 CDD 4CL 25 537 - -
Hepe05g0275 545 Pfam AMP-binding enzyme 43 405 IPR000873 -
Hepe05g0275 545 PANTHER LONG-CHAIN-FATTY-ACID--COA LIGASE 9 537 - GO:0016405(PANTHER)
Hepe05g0275 545 FunFam Long-chain-fatty-acid--CoA ligase FadD 17 442 - -
Hepe05g0275 545 FunFam 4-coumarate--CoA ligase 2 443 544 - -
Hepe05g0275 545 Gene3D - 443 544 IPR045851 -
Hepe05g0275 545 Pfam AMP-binding enzyme C-terminal domain 456 531 IPR025110 -
Hepe05g0275 545 SUPERFAMILY Acetyl-CoA synthetase-like 16 543 - -
Hepe05g0275 545 Gene3D - 14 442 IPR042099 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Hepe05g0275 Hepe-Chr5:3364903 Hepe10g1034 Hepe-Chr10:41075684 1.19e-183 dispersed
Hepe05g0275 Hepe-Chr5:3364903 Hepe08g1122 Hepe-Chr8:11201392 3.29e-127 transposed
Hepe05g0275 Hepe-Chr5:3364903 Hepe06g1813 Hepe-Chr6:69210885 3.24e-127 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hepe05g0275 K01904 - csv:101204417 944.88