Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Hepe05g0307 ATGAAGCGGGAGTTGGCTTTTGCTTTGGAGGTTCAATCTCAGCTTGAGGAGGCTCTCGGTCATACTCGTAGTGAGACTCTAGCTGAGGCGAGGTCTTCGAGTAGTTTTTTAGATTCTACCTGCAAGAGATTTAAAGGGTCTGTTGTCAATGGTTTGATTGTGTATACTAGAGGAAGGAGGTCTCAGATCAATGTGTATAATGGGTTGTCGGAGAATGAGAATAGGAACAAGTGTAATGAGAAAATTCAAACTATAGGTTTGGATAGTAGGACTGAGGAGGTTCATATTCAAACTAATTGTAATTCGATGAGTTTCGTCTGTAAGAAAGAGTCTGATGGAGTGGTGGAGAAATCTGCAGATATGGAAGAAGGGGATGTAGTTATTGCAGAGGCGAGAAACGTTGAGGAGAATTTGCCTGTGTGGGGGGGAGTTAAGCGCTTTACACGCTCCTCGTTAAGACCGAAGGTTGAGCCCGAGGAAGCTACCCCAATTAGAATAGGGTGCTCTGTTAAAGAGGAAGTTATTTCAGATGTCGGCGGGGAAACAAGTGAAGCAGTCAACTCTCTGTCAACTCCGAAGAACAAGTTAGAATTGAAAATGTCGAAAAAGATTTCATTGAATAAGAAGCCAATGACTGTGAAGGAGCTGTTTGATACTGGTTTGCTCGAGGGTGTACCTGTCATCTACATGGGTGTAAAGAAGGCATATGATTATGGTCTGCGCGGTACAATTAAAGATGGCGGGATTCTGTGTACTTGCTCGTCCTGCAATGGATGCAGAGTAATTCCTCCTTCGCAATTTGAGATCCACGCTTGTAAACAATATAAACGAGCAGCTCAGTATATATGTCTTGAGAACGGGAAGAGCCTACTCGACCTGGTGAGAGCATGCAAGGGAAGTAGGCAGACAGTTGAGGCCACTATACAAAGTCTGATTAGTTCTTCTCCAGAAGAAAAATATTTTACGTGTAGAGAGTGTAAAGGATGCTTTCCTTCATCCATTGGACAAGTGGGACCTTTATGCCATTCGTGCGAGGAATCAAAGCGATCTTGCTGTACGCTGGCACTGCCAGCTCCTGCCACTTCGGCAATTGTTAAGAGACTGAGGTCAACAGAGCCAACAACATCAAAATCATCTGGAAGTGTTCCAGTACATATCCCTTCACGATATAAACGTAAATGGGTGATAAAAGCAAAGTCAAAATCGTCCGAATACATTTCCATCTCAAGGTCCCCCAAAAGCGCACCAATGCGCATTCCTTCAAAGAATAAGAGTGCATTGAAGATGAGAAAGAAGTCATTGAAACCAGCCTCAATGTCAAAATCCTCCCAAAGTGCTTCAAAGTGTAGTTCTTCATTAGCTAAAAATCAGTGGAAAATAACAACGAAAGATCAGAGGTTGCATAAGTTGGTTTTTGAGGAAGACGGATTACCTGATGGAACTGAAGTAGCATATTTTGCCAGGGGACAGAAATTGCTCCAGGGTTATAAGAAGGGGTCTGGAATTATATGTTGCTGCTGCAATTGTGTGGTTAGTCCTTCGCAATTTGAAGTTCATGCTGGTTGGTCTTCTCGCAAGAAACCTTATGCATACATTTACACATCAAATGGGGTTTCTCTGCACGAATTAGCAATCTCTCTCTCGAAAGGGCGCAAGTATTCTGCAAAGGATAATGATGACTTATGCATAATATGTCTAGATGGTGGAAATCTTTTGCTTTGTGATGGCTGCCCAAGGGCATTCCACAAAGAATGTGCATCATTATCAAGTATTCCTCGTGGTGATTGGTATTGTAAATTTTGCCAGAATATGTTCCAAAGAGAGAAGTTTGTTGAGCATAATGCCAATGCTGTTGCAGCCGGAAGGGTATATGGAGTTGACCCTATTGAGCAGATAACTCAAAGATGCATTCGAATGGTCAGGAACATTGAAACGGATCTTAGTGGATGTGTGTTATGCCGTGGCTCTGATTTCAGCAAATCAGGTTTTGGACCCCGTACAATTATACTTTGTGATCAGTGTGAGAAGGAATTTCACGTGGGCTGTTTGAAAGATCACAAAATGGCATTTCTTAAGGAATTGCCCAGAGGAAAGTGGTTTTGTAGCACAGATTGTACGAGGATACATTCTGCTCTACAGAAGCTGCTAAGTCGTGGACTAGAGAAGCTTCCAGATTCACTTCTGGATATTGTCAATAGAAAGCTTGGAGAAATTGGTCCAGACAATAAGGCTGATGTTGATGTCAGTTGGAGGCTTATCAGTGGCAAAATTGCTTCACCTGAAACTCGGTTACTACTGTCACAGGCCATTGCCATTTTCCATGATCGCTTTGATCCTATAGTTGATATAACAAGTGGCCGCGATCTTATTCCAGCTATGGTTTATGGAAGGGATGTAGGTGGACAAGAGTTTGGAGGCATGTATTGTGCCATATTAGTTGTCAACTCATATGTTGTATCTGCTGCAATGCTTCGTATTTTTGGGCAAGATATTGCAGAGCTACCGTTGGTTGCGACAAGTAATGGTAACCATGGCAAGGGCTACTTCCAAACATTGTTTTCGTGCATCGAGAGGCTGCTAGCTTTCTTGAAAGTCAAGTGCCTTATTCTCCCGGCTGCTGAAGAAGCTGAATCCATTTGGACTGAAAAATTCGGTTTCAAGAGAATAAAACCGGACCAGCTCAGCAGCTATAGAAGAACTTGCTGCCAGATGGTGAAGTTCAAAGGGACATCCATGCTTCAGAAAACGGTTCCCTCATGTCGGGTCGTAGGCGACGCTCAATTGTGA 2787 43.06 MKRELAFALEVQSQLEEALGHTRSETLAEARSSSSFLDSTCKRFKGSVVNGLIVYTRGRRSQINVYNGLSENENRNKCNEKIQTIGLDSRTEEVHIQTNCNSMSFVCKKESDGVVEKSADMEEGDVVIAEARNVEENLPVWGGVKRFTRSSLRPKVEPEEATPIRIGCSVKEEVISDVGGETSEAVNSLSTPKNKLELKMSKKISLNKKPMTVKELFDTGLLEGVPVIYMGVKKAYDYGLRGTIKDGGILCTCSSCNGCRVIPPSQFEIHACKQYKRAAQYICLENGKSLLDLVRACKGSRQTVEATIQSLISSSPEEKYFTCRECKGCFPSSIGQVGPLCHSCEESKRSCCTLALPAPATSAIVKRLRSTEPTTSKSSGSVPVHIPSRYKRKWVIKAKSKSSEYISISRSPKSAPMRIPSKNKSALKMRKKSLKPASMSKSSQSASKCSSSLAKNQWKITTKDQRLHKLVFEEDGLPDGTEVAYFARGQKLLQGYKKGSGIICCCCNCVVSPSQFEVHAGWSSRKKPYAYIYTSNGVSLHELAISLSKGRKYSAKDNDDLCIICLDGGNLLLCDGCPRAFHKECASLSSIPRGDWYCKFCQNMFQREKFVEHNANAVAAGRVYGVDPIEQITQRCIRMVRNIETDLSGCVLCRGSDFSKSGFGPRTIILCDQCEKEFHVGCLKDHKMAFLKELPRGKWFCSTDCTRIHSALQKLLSRGLEKLPDSLLDIVNRKLGEIGPDNKADVDVSWRLISGKIASPETRLLLSQAIAIFHDRFDPIVDITSGRDLIPAMVYGRDVGGQEFGGMYCAILVVNSYVVSAAMLRIFGQDIAELPLVATSNGNHGKGYFQTLFSCIERLLAFLKVKCLILPAAEEAESIWTEKFGFKRIKPDQLSSYRRTCCQMVKFKGTSMLQKTVPSCRVVGDAQL 928
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 3787210 3796680 - Hsped.05g03070.1 Hepe05g0307 569572
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Hepe05g0307 928 SUPERFAMILY Acyl-CoA N-acyltransferases (Nat) 799 891 IPR016181 -
Hepe05g0307 928 CDD PHD1_AIRE 561 601 - -
Hepe05g0307 928 Pfam Tify domain binding domain 242 297 IPR032308 -
Hepe05g0307 928 Pfam Tify domain binding domain 495 544 IPR032308 -
Hepe05g0307 928 SUPERFAMILY FYVE/PHD zinc finger 550 606 IPR011011 -
Hepe05g0307 928 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 645 708 IPR013083 -
Hepe05g0307 928 PANTHER AUTOIMMUNE REGULATOR 95 920 - GO:0000977(PANTHER)|GO:0003682(PANTHER)|GO:0005634(PANTHER)|GO:0042393(PANTHER)|GO:0045944(PANTHER)
Hepe05g0307 928 FunFam Acyl-CoA N-acyltransferase with RING/FYVE/PHD-type zinc finger domain 548 625 - -
Hepe05g0307 928 FunFam Acyl-CoA N-acyltransferase with RING/FYVE/PHD-type zinc finger domain 646 708 - -
Hepe05g0307 928 ProSitePatterns Zinc finger PHD-type signature. 562 601 IPR019786 -
Hepe05g0307 928 ProSiteProfiles Zinc finger PHD-type profile. 559 604 IPR019787 -
Hepe05g0307 928 SUPERFAMILY FYVE/PHD zinc finger 646 704 IPR011011 -
Hepe05g0307 928 SMART PHD_3 561 602 IPR001965 -
Hepe05g0307 928 SMART PHD_3 649 706 IPR001965 -
Hepe05g0307 928 MobiDBLite consensus disorder prediction 407 448 - -
Hepe05g0307 928 Pfam Histone-lysine N-methyltransferase NSD-like, PHD zinc finger 1 558 602 - -
Hepe05g0307 928 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 548 631 IPR013083 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Hepe05g0307 Hepe-Chr5:3787210 Hepe08g0720 Hepe-Chr8:6497542 3.30e-45 dispersed
Hepe02g0473 Hepe-Chr2:4612678 Hepe05g0307 Hepe-Chr5:3787210 2.60e-06 transposed
Hepe05g0307 Hepe-Chr5:3787210 Hepe08g0937 Hepe-Chr8:8619712 2.73e-266 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
55554 PF16135 TDBD 3.00E-12 No_clan Hepe TR
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hepe05g0307 - - - 0.0