Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Hepe05g0319 ATGGAGCTCTTTCTTCTTCCTTCCTACAAACAAAACCCCACTATTTTCAACAAGCCCCTTAACCCTTTCGCCATTATTGGGAAGAGACGGCCATCTCTTTTCCCTTGTCGATGCTCATTATCGTCCTCACATGAAGAATCTTCAGAACAAGCCAAAGAATTGCTGCGGTGTGAGGGAAGAAGGGCATTGATTGGTTCTTTCCTGTCGACGGCTGCTGGTATATATTTCTGCAATGTAGCCGAAGCTGTTAGCACAAGTAGAAGGGCTTTAAGAGGAGCAAAAATACCTGAAAGTGAGTTTACAACTCTCCCAAATGGTCTGAAGTACTATGATTTGAAGGTTGGAGGAGGACTTAAGGCTGTGATTGGATCCCGTGTTGCAGTTCACTATGTGGCTAAATGGAGAGGGATTACCTTTATGACAAGTAGACAAGGGCTTGGTGTTGGTGGAGGAACGCCTTATGGATTTGATGTAGGCCAATCAGAAAGAGGAACAGTCCTCAAGGGATTGGATCAAGGTGTTCAAGGCATGAGGGTGGGAGGCCAGAGATTGCTTCTAGTTCCTCCTGAGTTAGCTTATGGAAGCAAAGGGGTTCAGGAAATTCCTCCAAATGCAACAATAGAGTTGGATGTTGAATTGCTATCCATCAAACAAAGTCCATTTGGTTACTGCTGCTATTCGCAGAAAACCTGCCCGAGCTGTGGCCCCATTGAGGTTCCTTATCCTCTGAGTACCAATTCCAACTGTGGTGACTTAGATTACACTCTCCGCTGTGATTCTCATTCACAGAAACTCTACTTCGATGCACTCAATGGAAGTTCATATCCCGTCCTCAAAGTCAATGCTTCGAGTCAACGTATGGTGATCCAACCATCTCCATGGGTTCCTGGCTCCTGTGTTACTCAAGACATGTTGGTCAGTGAAGGCCTGTGGTTAAACCAATCACTCCCTTTTAACATCACTTCATCAAATACAGTTTTCCTCTTGAACTGTTCTCCTCGCCTGCTGGTCTCGCCGCTCAATTGCACTGCTTCGAGTCTCTGTCACCACTACTTGGCGAGTTCAGGACGAGTTGATGGAAAAAAAGCATTTCAGTGTGCAAGCGTTCTTGATCCTTGTTGTACCTTCATCCCTGGTGGGATGCCCTCAGCATATAAGATAAGGCTTCATAACTCAGGCTGTAGAGCATTCAGGAGCATCCTTCACCTAGATGTAGAAAAGCCTGCAAATCAATGGGAGGAAGGTTTGGAAATTCAGTGGGCTACTCCACATGAACCAATCTGTAAAACTCAATCTGATTGCACTGGAGCGTCGGATTGTCTTCCTACTGGCGGTTCCAACAGTCGTTCTCGTTGCCTTTGTAGAAGGAGCTACTATTGGGATCATATTCTCGGAACATGCCTGAGAACGAATAGGAAGAGCATGGTTGGACTCAGTATAAAGCTTTCGGTATGTCTGGTTTCCTTTTTCATTCTGGCTGCGATTATAGCTCTAATTACAGTCAGGAAGTCCAGAACTTCCAGTAAACAGGAAAAGCTATGTAAAGAAAGAGAAGATATGTTGAATTCAAACAATGGCGGAAGACCAGCCAGGATGTTTCATCTGAAAGAGATGAAGAAAGCAACAAATGAATTTTCGAAAGACAGGGTCCTAGGGTGCGGTGGCTTCGGAGAAGTTTACAAAGGTGAACTTCAGGATGGGACTGTTGTAGCCGTGAAGTCGGCTAAAGTGGGCAATCTAAAGAGCACCGAGCAAATACTCAACGAAGTCGGAATACTATCTCAAGTAAATCACAAGAATCTTGTGAAACTTATAGGTTGCTGTGTAGAAACTGAGCAACCATTGATGATATATGAATACATTCCCAATGGCACCCTCCATGACCATTTACATGGTAAGTTTCCCACTTTCTTGGACTGGAGAAAAAGGCTAAAAATTGCTTCACAAACCGCTGAAGCATTAGCTTATTTGCATTCAGCTGCATATCCTCCCATCTATCATAGAGATGTCAAGTCAACAAATATACTCTTAGATGATAACGTTAATGCCAAAGTTGCAGATTTTGGACTTTCTAGATTGGCTTTGCCAGGAATAAGCCATGTTTCCACTTGTGCTCAGGGTACATTAGGTTACCTAGACCCGGAATACTATCGAAATTACCAATTAACAGATAAAAGTGATGTATATAGTTTTGGAGTTGTCCTGCTTGAGCTTTTAACCTCTCAGAAAGCCATAGATTTCACAAGAGATGAAGACGGTGTCAATCTAGCAATCTATGTGATCCAACAAGTGCATAATGGTGCATTCATCGACACCATCGATAAACAGATTATCAGTCATGATCCGTCCAGCAATATACTGATCAGTGTGAAGCAGTTCTTGGAACTCGCCCTCGCTTGTTTAAAGGAGAAAAAAGTGGAAAGGCCTTGCATGAAGGATGTACTCCAAGAACTTGAATACATAACTCAGATATTGGACAATCCAAAAACTGTTTCTGAAGAAGGCAGATCTTAA 2514 43.36 MELFLLPSYKQNPTIFNKPLNPFAIIGKRRPSLFPCRCSLSSSHEESSEQAKELLRCEGRRALIGSFLSTAAGIYFCNVAEAVSTSRRALRGAKIPESEFTTLPNGLKYYDLKVGGGLKAVIGSRVAVHYVAKWRGITFMTSRQGLGVGGGTPYGFDVGQSERGTVLKGLDQGVQGMRVGGQRLLLVPPELAYGSKGVQEIPPNATIELDVELLSIKQSPFGYCCYSQKTCPSCGPIEVPYPLSTNSNCGDLDYTLRCDSHSQKLYFDALNGSSYPVLKVNASSQRMVIQPSPWVPGSCVTQDMLVSEGLWLNQSLPFNITSSNTVFLLNCSPRLLVSPLNCTASSLCHHYLASSGRVDGKKAFQCASVLDPCCTFIPGGMPSAYKIRLHNSGCRAFRSILHLDVEKPANQWEEGLEIQWATPHEPICKTQSDCTGASDCLPTGGSNSRSRCLCRRSYYWDHILGTCLRTNRKSMVGLSIKLSVCLVSFFILAAIIALITVRKSRTSSKQEKLCKEREDMLNSNNGGRPARMFHLKEMKKATNEFSKDRVLGCGGFGEVYKGELQDGTVVAVKSAKVGNLKSTEQILNEVGILSQVNHKNLVKLIGCCVETEQPLMIYEYIPNGTLHDHLHGKFPTFLDWRKRLKIASQTAEALAYLHSAAYPPIYHRDVKSTNILLDDNVNAKVADFGLSRLALPGISHVSTCAQGTLGYLDPEYYRNYQLTDKSDVYSFGVVLLELLTSQKAIDFTRDEDGVNLAIYVIQQVHNGAFIDTIDKQIISHDPSSNILISVKQFLELALACLKEKKVERPCMKDVLQELEYITQILDNPKTVSEEGRS 837
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 3943871 3950399 - Hsped.05g03190.1 Hepe05g0319 569584
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Hepe05g0319 837 Gene3D Transferase(Phosphotransferase) domain 1 621 834 - -
Hepe05g0319 837 CDD STKc_IRAK 551 819 - -
Hepe05g0319 837 SMART serkin_6 545 821 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Hepe05g0319 837 Pfam FKBP-type peptidyl-prolyl cis-trans isomerase 119 214 IPR001179 GO:0003755(InterPro)
Hepe05g0319 837 FunFam Wall-associated receptor kinase-like 20 507 620 - -
Hepe05g0319 837 PANTHER LEAF RUST 10 DISEASE-RESISTANCE LOCUS RECEPTOR-LIKE PROTEIN KINASE-LIKE 1.4 227 822 IPR044652 GO:0004672(InterPro)|GO:0016301(PANTHER)|GO:0016310(PANTHER)
Hepe05g0319 837 ProSiteProfiles Protein kinase domain profile. 545 821 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Hepe05g0319 837 SUPERFAMILY Protein kinase-like (PK-like) 522 822 IPR011009 -
Hepe05g0319 837 FunFam Wall-associated receptor kinase-like 20 621 831 - -
Hepe05g0319 837 Pfam Wall-associated receptor kinase galacturonan-binding 231 289 IPR025287 GO:0030247(InterPro)
Hepe05g0319 837 SUPERFAMILY FKBP-like 92 217 - -
Hepe05g0319 837 Pfam Protein tyrosine and serine/threonine kinase 547 818 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Hepe05g0319 837 Gene3D - 79 220 IPR046357 GO:0003755(InterPro)
Hepe05g0319 837 ProSiteProfiles FKBP-type peptidyl-prolyl cis-trans isomerase domain profile. 123 217 IPR001179 GO:0003755(InterPro)
Hepe05g0319 837 ProSitePatterns Protein kinases ATP-binding region signature. 551 573 IPR017441 GO:0005524(InterPro)
Hepe05g0319 837 Gene3D Phosphorylase Kinase; domain 1 515 620 - -
Hepe05g0319 837 ProSitePatterns Serine/Threonine protein kinases active-site signature. 665 677 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Hepe04g0830 Hepe-Chr4:62478820 Hepe05g0319 Hepe-Chr5:3943871 5.13e-180 dispersed
Hepe04g1199 Hepe-Chr4:67263895 Hepe05g0319 Hepe-Chr5:3943871 3.68e-88 dispersed
Hepe05g0319 Hepe-Chr5:3943871 Hepe10g1945 Hepe-Chr10:56330880 1.56e-82 dispersed
Hepe05g1310 Hepe-Chr5:61243821 Hepe05g0319 Hepe-Chr5:3943871 1.29e-11 dispersed
Hepe06g0146 Hepe-Chr6:5333945 Hepe05g0319 Hepe-Chr5:3943871 2.64e-48 dispersed
Hepe07g2359 Hepe-Chr7:67956059 Hepe05g0319 Hepe-Chr5:3943871 4.35e-12 dispersed
Hepe08g2283 Hepe-Chr8:62540244 Hepe05g0319 Hepe-Chr5:3943871 8.16e-39 dispersed
Hepe05g0319 Hepe-Chr5:3943871 Hepe02g3355 Hepe-Chr2:83126701 7.95e-210 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
72802 PF07714 PK_Tyr_Ser-Thr 1.50E-47 CL0016 Hepe PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hepe05g0319 - - - 0.0