Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Hepe05g0329 ATGATGATGGTGATGATGGAGAAGATGAATCAGGAGAACCAGAAGAAGGTGAAGATTTTCAGTTCTGCCATAGCTTTTTTTCTTACCATTACCCTTTTGGGTTCTCCTTCTCTTTGTTTGAATGATACTTCTGCTCTGACTCTGTTCCGTCTTCAAGCTGATTCCCATGGCGGCCTTCTCAGAAACTGGACTGGTTCTGATGCTTGTGATTCTTCATGGTTTGGAGTTCAGTGCTCTGTTAATGGCCGCCGTGTTGTTTCTCTTTCTCTTCCTTCTATGAACTTACGAGGTTCTGTTGAATCTCTTGCGCCGCTTGATCAACTTCGTCTTCTCGACCTCCATGATAACCGCTTGAATGGAACCGTTTCGCCGATTTTGAACTGTACGAATCTTAAGCTACTGTATCTCTCTGGAAATGACTTTTCCGGCGAGATTCCGCCGGAGATCTCGTCTCTTAGGAGACTTCTCCGGCTGGATTTGTCTGATAACAACATTCGCGGTGGAATTCCTGAGGATCTCTTGAAATTGTCTCGGCTTCTCACGCTACGTTTGCAGAACAATGTCCTCTCCGGTACGATTCCTGATCTCTCTGTTTCGCTTGTGAATCTCACTGAAGTTAATTTAACCGACAATGAACTGTACGGGCGGTTACCGGACGGGATGGTGAAGAAATTCGGCGAGGGGAGTTTCGCCGGTAACGAAGGGGTTTGTGGATCGAGTCCGTTGCCGATCTGTTCGGTTACTGGTTCATCGCCGGCGTCGGATTCCGGTAGAACCGTACCTTCGAATCCAAGCTCATTGCCGCAAAACCCTATCATTAGTCCGAACCTTAAAGAATCGCGAAAAGGACTCAAACCTGGAGCGATTGTCGCGATTGTGATCGCAAATTGCGTAGCGTTGCTAGTGATTATCTCGTTCATCGTCGCGTATTACTGCGCTCGTGATCGGAGTTCGAGCTCCATGGCCGGAAGCGAGAACGGGAAGAGAAGGAGGAGCGGAAGTAGCTACGGAAGCGAGAAGAAGGTCTACGCCAATGGCGGTGGCGACAGTGACGGCACTAACGCGACAGATAGAAGCAAACTTGTGTTCTTCGATTGGAAGAAGCAATTCGAGCTTGAAGATTTGCTGAGAGCGTCGGCGGAGATGCTCGGAAAAGGAAGCTTGGGGACGGTTTACAGGGCGGTGCTGGACGACGGTTGTACGGTGGCGGTGAAGAGATTGAAGGATGCAAATCCATGTCCGAGGAAGGATTTCGAACAGTATATGGATGTGATCGGAAAGCTGAAGCATCCAAATGTTGTTAGATTGAGAGCTTTTTACTATGCTAAAGAAGAAAAGCTTCTGGTTTATGATTATCTTCCTAATGGAAGCTTACATTCTCTTCTCCATGGTAATCGAGGACCAGGGAGGATTCCATTGGATTGGACGACAAGAATCAGTTTGGTTTTGGGAGCTGCTCGTGGATTAGCTAGAATCCATGGAGAATACTGTTCTTCAAAGATCCCCCATGGCAATGTGAAGTCTTCTAATGTTCTTCTTGACAAGAATGGACTTGCTTGCATTTCTGATTTTGGGTTGTCTCTACTTCTCAATCCCGTCCACGCCATTGCTAGGTTGGGAGGGTACAAGGCCCCGGAACAAGACGAGACGAAACGACTCTCTCAAAAGGCAGATGTCTATAGCTTTGGAGTCTTGTTGCTCGAAGTCTTGACGGGGCGTGCACCGTCGCTCTACCCGTCGCCTTCGCACCCACGAAACGACGAGGTGGAGCAGACGGTGGACCTCCCGAAATGGGTTCGATCCGTGGTGAAGGAAGAGTGGACTGCGGAGGTGTTTGATCCCGAGCTTTTGAGGTACAAGAACATTGAGGAGGAGCTTGTGTCCATGCTTCATGTTGGGTTGGCTTGTGTTCTTCCTCAGCCTGAGAAGAGACCGACAATGGCGGAAGTGGCGAAGATGATCGAAGATATCAGGGTCGAGCAGTCTCCGATCGGAGAAGATTACGACGAATCGCGTAATTCGCTTTCGCCTTCTCTTGCCACCACAGAAGATGGTATGGTGTAG 2064 48.84 MMMVMMEKMNQENQKKVKIFSSAIAFFLTITLLGSPSLCLNDTSALTLFRLQADSHGGLLRNWTGSDACDSSWFGVQCSVNGRRVVSLSLPSMNLRGSVESLAPLDQLRLLDLHDNRLNGTVSPILNCTNLKLLYLSGNDFSGEIPPEISSLRRLLRLDLSDNNIRGGIPEDLLKLSRLLTLRLQNNVLSGTIPDLSVSLVNLTEVNLTDNELYGRLPDGMVKKFGEGSFAGNEGVCGSSPLPICSVTGSSPASDSGRTVPSNPSSLPQNPIISPNLKESRKGLKPGAIVAIVIANCVALLVIISFIVAYYCARDRSSSSMAGSENGKRRRSGSSYGSEKKVYANGGGDSDGTNATDRSKLVFFDWKKQFELEDLLRASAEMLGKGSLGTVYRAVLDDGCTVAVKRLKDANPCPRKDFEQYMDVIGKLKHPNVVRLRAFYYAKEEKLLVYDYLPNGSLHSLLHGNRGPGRIPLDWTTRISLVLGAARGLARIHGEYCSSKIPHGNVKSSNVLLDKNGLACISDFGLSLLLNPVHAIARLGGYKAPEQDETKRLSQKADVYSFGVLLLEVLTGRAPSLYPSPSHPRNDEVEQTVDLPKWVRSVVKEEWTAEVFDPELLRYKNIEEELVSMLHVGLACVLPQPEKRPTMAEVAKMIEDIRVEQSPIGEDYDESRNSLSPSLATTEDGMV 687
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 4056429 4059134 - Hsped.05g03290.1 Hepe05g0329 569594
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Hepe05g0329 687 Pfam Protein kinase domain 381 652 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Hepe05g0329 687 Gene3D Phosphorylase Kinase; domain 1 350 452 - -
Hepe05g0329 687 Gene3D Ribonuclease Inhibitor 123 246 IPR032675 -
Hepe05g0329 687 CDD STKc_IRAK 383 657 - -
Hepe05g0329 687 Gene3D Ribonuclease Inhibitor 39 122 IPR032675 -
Hepe05g0329 687 MobiDBLite consensus disorder prediction 248 275 - -
Hepe05g0329 687 FunFam Nuclear pore complex protein NUP107 40 195 - -
Hepe05g0329 687 SUPERFAMILY L domain-like 42 220 - -
Hepe05g0329 687 Gene3D Transferase(Phosphotransferase) domain 1 453 675 - -
Hepe05g0329 687 ProSiteProfiles Protein kinase domain profile. 377 659 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Hepe05g0329 687 PANTHER OS05G0588300 PROTEIN 25 662 IPR050994 -
Hepe05g0329 687 MobiDBLite consensus disorder prediction 318 351 - -
Hepe05g0329 687 FunFam protein STRUBBELIG-RECEPTOR FAMILY 8 453 666 - -
Hepe05g0329 687 Pfam Leucine Rich Repeat 155 176 IPR001611 GO:0005515(InterPro)
Hepe05g0329 687 Pfam Leucine Rich Repeat 130 152 IPR001611 GO:0005515(InterPro)
Hepe05g0329 687 MobiDBLite consensus disorder prediction 662 687 - -
Hepe05g0329 687 FunFam pollen receptor-like kinase 1 348 452 - -
Hepe05g0329 687 SUPERFAMILY Protein kinase-like (PK-like) 381 654 IPR011009 -
Hepe05g0329 687 Pfam Leucine rich repeat N-terminal domain 41 79 IPR013210 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Hepe01g1165 Hepe-Chr1:76776293 Hepe05g0329 Hepe-Chr5:4056429 5.97e-67 dispersed
Hepe01g1171 Hepe-Chr1:76864514 Hepe05g0329 Hepe-Chr5:4056429 2.94e-131 dispersed
Hepe05g0329 Hepe-Chr5:4056429 Hepe08g2570 Hepe-Chr8:67362052 1.55e-104 dispersed
Hepe05g0329 Hepe-Chr5:4056429 Hepe08g0676 Hepe-Chr8:6049883 4.73e-109 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
72803 PF00069 Pkinase 1.80E-33 CL0016 Hepe PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hepe05g0329 - - - 0.0