Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Hepe05g0338 ATGGAAATGCCCGGCAGGAGGTTGAACTATACTCTTCTCAGTCAGATTCCAGACGACCAATACAGTGGTGGTGTTGGCGGTGCTGCCGGAGCTTCGACGTCGTTGAAAGAATCATCATCGGGAGAGGGGAAGAACGACAAGAGGAAGTTGGATTGGGAAGCTGGTGGTGATCACAGGGCGGTCCAGCACCAGCAGGTTAATTGGATCGGCAATATGTACTCGGCGTTTGGTTTGCAGAGGCAGTCCAGTGGAAGCAGCTTTGGTGAGAGTTCGATATCCGGGGAGTACTATGCACCGACGCCGTCGACTACGGTGGCTAACGAGACGGATGCGTTTGGTTTTACGCACGATGATATGCTTAGGATTGGAGGCGATTCGAGAGCACAGGCGGCCGAGATGGCCGCCGGGACTGGTGGATCTTCCGGTAAGAGCTGGGCGCAACAGACGGAAGAGAGTTATCAACTGCAGTTGGCATTGGCACTTCGGCTTTCCTCTGAGGCGACTTGTGCTGACGATCCGAATTTCTTAAATCCATTTCAGGATGATTCTTCTTTAAGAAGGTCGATAAGCTCTGCCGAGGCTGTTTCACATCGATTTTGGGTGAATGGCTGTCTATCATACTTTGACAAAGTTCCTGATGGGTTTTATCTAATCCATGGAATGGATCCATATGTATGGACTGTGTGCACCAGCTTGCCTGATAATGATCGCATGCCATCTATTGAATCTCTAAAGTCTGTTGATCCTAGCATGGATTCTTCATTTGAAGTTGTTCTGATTGATCGACGTGCTGATCCCAACTTAAAAGACCTCCAAAATCGGGTCCAAAACATTTCTTGCAGCTCTATAACCACAAAAGAGGTTGTAGACCAGCTTGCAAAACTTGTCTGTAGGAGTTTGGGTGGCTCAGTTTCTGGAGAAGATGTGTTGGTGTCCATCTGGAGGGAGTGCAGTGATAACTTGAAGGAGTCCTTAGGCTCAGTGGTTGTTCCTCTTGGTGGGCTTTCTGTAGGACTCTGCCGGCATCGTGCTCTTCTTTTCAAAGTGTTAGCTGACACAATTGATTTACCATGTCGAGTAGCCAAGGGCTGTAAATATTGCTCATGCCATGATTCTTCTTCTTGTCTTGTTCAGTTTGGGCTTGACAAGGAGTATATGGTTGACTTGATTGGCAATCCTGGTTGCTTATATGAGCCTGATTCTTTGCTCAATGGTCCATCCTCCATTTCAATCTCCTCACCATTGCGATTTCCACGACTAAAGCCAGTAGAGCCTGCTATTGATTTCAGGTCACTGGCTAAACAGTACTTTTCAGATTGCCAGTTGCTTAATGTTGTTTTTGATGAAGCTTCCTCAGAAATTACAGAAATTACTGTGGATGGAGAAGATGGCGCACTCCCCTTGTATCTAAAGCAGAAGCAACCTAACTCCCAAGACAGAGATTTCCAACTATTTAAACCACGTGATAATTCTCATAATGTTATACAATCAACTGCCATGGTTGAGGATCCAATCCCAATGAAGTACGTTCCTCAAATTGGCCGTAGAAGTGTGCAGTCAATTTTGGATATGCCCCAGCCAAGGATGGATTCTACTATGGACGTAAGGTTTGCACAGGGAGGTCAGCTAATACCAAGTACTCGGAGTCAAACACTTCCCTTTAGTGCAGAGGATTTGGACATTCCATGGAAGGATCTTGATTTAAAAGAAAGAATTGGTGCAGGTTCCTTCGGAACTGTACATCGTGCTGATTGGAATGGATCGGAAGTTGCCGTGAAGATCCTCACAGAACAAGACTACCATCCTGAACGTGTTAATGAGTTTCTGAGAGAGGTTGCTATCATGAAATCTTTACGACATCCTAATATTGTACTGTTTATGGGTGCGGTGACCAAGCCACCAAACCTGTCCATTGTCACTGAATATCTATCGAGAGGTAGCTTGTATAGGCTTATGCATAAGTCAGGTGTCAAAGACATAGATGAAACACGTCGGATAAATATGGCTTTTGATGTGGCAAAGGGAATGAACTATCTCCATAGACGTGATCCTCCAATTGTTCATCGTGATTTAAAATCACCAAATCTTTTAGTCGACAAAAAGTATACAGTAAAGGTTTGTGATTTTGGTCTCTCCCGTTTAAAGGCACGCACATTTCTTTCATCAAAATCCGCAGCTGGAACACCTGAATGGATGGCACCAGAAGTACTACGTGATGAGCCCTCAAATGAAAAATCAGATGTTTACAGCTTTGGAGTGATTTTATGGGAGTTGGCAACTTTGCAACAGCCATGGTGTAATCTAAACCCAGCTCAGGTTGTTGCAGCTGTTGGATTTAAGGGCAAAAGGCTTGAAATCCCACGTGATGTAAATCCCAGATTGGCTTCCTTAATAGTGGCTTGCTGGGCCGACGAGCCCTGGAAACGTCCATCTTTTTCCAGCATAATGGAAACCTTGAAGCCAATGACTAGACAAGCACCACCTCAACAAGGTCGTGCAGACATGTGA 2508 45.37 MEMPGRRLNYTLLSQIPDDQYSGGVGGAAGASTSLKESSSGEGKNDKRKLDWEAGGDHRAVQHQQVNWIGNMYSAFGLQRQSSGSSFGESSISGEYYAPTPSTTVANETDAFGFTHDDMLRIGGDSRAQAAEMAAGTGGSSGKSWAQQTEESYQLQLALALRLSSEATCADDPNFLNPFQDDSSLRRSISSAEAVSHRFWVNGCLSYFDKVPDGFYLIHGMDPYVWTVCTSLPDNDRMPSIESLKSVDPSMDSSFEVVLIDRRADPNLKDLQNRVQNISCSSITTKEVVDQLAKLVCRSLGGSVSGEDVLVSIWRECSDNLKESLGSVVVPLGGLSVGLCRHRALLFKVLADTIDLPCRVAKGCKYCSCHDSSSCLVQFGLDKEYMVDLIGNPGCLYEPDSLLNGPSSISISSPLRFPRLKPVEPAIDFRSLAKQYFSDCQLLNVVFDEASSEITEITVDGEDGALPLYLKQKQPNSQDRDFQLFKPRDNSHNVIQSTAMVEDPIPMKYVPQIGRRSVQSILDMPQPRMDSTMDVRFAQGGQLIPSTRSQTLPFSAEDLDIPWKDLDLKERIGAGSFGTVHRADWNGSEVAVKILTEQDYHPERVNEFLREVAIMKSLRHPNIVLFMGAVTKPPNLSIVTEYLSRGSLYRLMHKSGVKDIDETRRINMAFDVAKGMNYLHRRDPPIVHRDLKSPNLLVDKKYTVKVCDFGLSRLKARTFLSSKSAAGTPEWMAPEVLRDEPSNEKSDVYSFGVILWELATLQQPWCNLNPAQVVAAVGFKGKRLEIPRDVNPRLASLIVACWADEPWKRPSFSSIMETLKPMTRQAPPQQGRADM 835
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 4127975 4139423 + Hsped.05g03380.1 Hepe05g0338 569603
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Hepe05g0338 835 Pfam Ethylene-responsive protein kinase Le-CTR1 192 396 - -
Hepe05g0338 835 SUPERFAMILY Protein kinase-like (PK-like) 544 819 IPR011009 -
Hepe05g0338 835 PANTHER SERINE-THREONINE PROTEIN KINASE 156 822 IPR050167 GO:0004672(PANTHER)|GO:0005737(PANTHER)|GO:0007165(PANTHER)
Hepe05g0338 835 MobiDBLite consensus disorder prediction 17 50 - -
Hepe05g0338 835 ProSitePatterns Serine/Threonine protein kinases active-site signature. 686 698 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Hepe05g0338 835 Gene3D Transferase(Phosphotransferase) domain 1 645 833 - -
Hepe05g0338 835 ProSiteProfiles Protein kinase domain profile. 566 823 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Hepe05g0338 835 CDD STKc_MAP3K-like 572 819 - -
Hepe05g0338 835 FunFam Serine/threonine-protein kinase isoform 1 556 644 - -
Hepe05g0338 835 FunFam Serine/threonine-protein kinase CTR1 645 829 - -
Hepe05g0338 835 SMART serkin_6 566 823 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Hepe05g0338 835 ProSitePatterns Protein kinases ATP-binding region signature. 572 593 IPR017441 GO:0005524(InterPro)
Hepe05g0338 835 Gene3D Phosphorylase Kinase; domain 1 559 644 - -
Hepe05g0338 835 Pfam Protein tyrosine and serine/threonine kinase 567 819 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Hepe05g0338 835 PRINTS Tyrosine kinase catalytic domain signature 727 737 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Hepe05g0338 835 PRINTS Tyrosine kinase catalytic domain signature 790 812 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Hepe05g0338 835 PRINTS Tyrosine kinase catalytic domain signature 680 698 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Hepe05g0338 835 PRINTS Tyrosine kinase catalytic domain signature 640 653 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Hepe05g0338 835 PRINTS Tyrosine kinase catalytic domain signature 746 768 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Hepe05g0338 Hepe-Chr5:4127975 Hepe09g1569 Hepe-Chr9:42598454 5.83e-143 dispersed
Hepe01g2174 Hepe-Chr1:86381103 Hepe05g0338 Hepe-Chr5:4127975 5.74e-38 transposed
Hepe01g2175 Hepe-Chr1:86382069 Hepe05g0338 Hepe-Chr5:4127975 6.77e-152 transposed
Hepe04g1005 Hepe-Chr4:64668992 Hepe05g0338 Hepe-Chr5:4127975 0.0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
72804 PF07714 PK_Tyr_Ser-Thr 2.20E-70 CL0016 Hepe PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hepe05g0338 K14510 - csv:101208452 1479.54