Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Hepe05g0345 ATGGAAATGGATGATCAATATGCCCTCTCCGATCTCCGCCACCTCATGACTGCTCCGCCATCTCGTTCTCATTTTCCTTCTTCCTCAATTCCCCACCATGATAATAATCTCTTCTCGTCCTCGGCTTCGGCTTCGGCCTCGGCCTCGGCCTCGGCCGCCTTCCGTCACCACCATAGCCCTTACGATCTCATGATGATGATGCCACGTGACTCTCTCCCTGACTTTCACTCCGATTCCGCTGCTACCCCGCCTCCCGTCGTCTCCGCTCCTCCCACCGCCTTCGATGTCGAAACCGCCTCCCTCGCCGCTGACTCCGCCACCGCTCGGTGGCCTCGACAGGAAACTCTTACTCTCTTGGATGTTAGATCTCGGCTTGATTCTAAATTCAAAGAAGCTAACCAGAAAGGCCCCCTTTGGGATGAGGTTTCTAGAATCATGGGTGAGGAACACAATTATCAAAGAAGTGGGAAAAAATGCAGAGAAAAGTTTGAGAATTTGTATAAATATTACAAAAAGACAAAGGAAGGCAAAGCTGGAAGACAAGATGGTAAGAACTACAGATTCTTTAGGCAATTGGAAGCTCTCTATGGTGAAACAAGCAATGCCAGTTTAGTTCCAGATAATTCCCATTTTGTTGGAGACGACAGCAACCTCAGATTCCAACAAAATGGGACCAACAATAATAATCCGACCGCTGCTCCGATGAGCCATGATGCTCAGCAGAAGCATTACTGCGATAGCCTCAGCCTCTCCAACACGTCTGAGTTCGAAACCTCGGCCTCGTCCGACGACCTCGGCTCGGTCGGCATAATGGACAACGATTCGGTCGAGAAGAGAAGGAAGCGGCGAGGCGGGAAATGCTGGAAGGCGAAGATCAAACAGTTCATTGACTGGCAAATGAGGAAGCTAATTGATAAGCAAGAGGCTTGGTTGGAGAAGCTCATGAAAACTCTTGAACAAAAAGAAAAGGAGAGAATGGTTCGCGAGGAGGAATGGAGGAGACAAGAAGTGTCGAGAATTGACCGAGAGAGAAGCTTTTGGGCAAAGGAGAGAGCATGGATAGAAGCTAGAGATGCAGCATTAATGGAGGCATTACAAAAGCTAACAGGTCGAGAATTGAGAGAATACAACTCCTCGCCCGACCGCGGATTAATTGCGGCCGGGCGACACCAAAATGACGGCGAGAATCAAAACGAAGACGGGAGCGAAATACTAAACAACAGCACAGCTAGAGAAGTAGCAGACAATAATTACCAAAGGAAAATAATAGATCAAGGCAACAAGAAACGCAAGGAGAATTCAAGATCAGCCACAACCTACAATCTTTACTTCCAAACCGATTCCTCCCTCTATAGCGGCAGCGGCGGAGCCTACGGCGGTGGCGCCGAGATGAAAGAACAAAGTCCAAATAGTTCGAACGCGGGAGGCAGCGGTGGCGGCGGTGGCGGCGGCGGCCATGTGGTGCAAGACAGTTGCTTTCGTTTCTTGATGGGTGAAGGAGATCAATCTCAATCTGGTTTGTGGGAAAATTTTGGGCTCAAACTCAACAATGGAAGTGATCAAACTTGA 1569 49.2 MEMDDQYALSDLRHLMTAPPSRSHFPSSSIPHHDNNLFSSSASASASASASAAFRHHHSPYDLMMMMPRDSLPDFHSDSAATPPPVVSAPPTAFDVETASLAADSATARWPRQETLTLLDVRSRLDSKFKEANQKGPLWDEVSRIMGEEHNYQRSGKKCREKFENLYKYYKKTKEGKAGRQDGKNYRFFRQLEALYGETSNASLVPDNSHFVGDDSNLRFQQNGTNNNNPTAAPMSHDAQQKHYCDSLSLSNTSEFETSASSDDLGSVGIMDNDSVEKRRKRRGGKCWKAKIKQFIDWQMRKLIDKQEAWLEKLMKTLEQKEKERMVREEEWRRQEVSRIDRERSFWAKERAWIEARDAALMEALQKLTGRELREYNSSPDRGLIAAGRHQNDGENQNEDGSEILNNSTAREVADNNYQRKIIDQGNKKRKENSRSATTYNLYFQTDSSLYSGSGGAYGGGAEMKEQSPNSSNAGGSGGGGGGGGHVVQDSCFRFLMGEGDQSQSGLWENFGLKLNNGSDQT 522
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 4216002 4218794 - Hsped.05g03450.1 Hepe05g0345 569610
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Hepe05g0345 522 PANTHER FI21293P1 82 437 - -
Hepe05g0345 522 ProSiteProfiles Myb-like domain profile. 102 167 IPR001005 -
Hepe05g0345 522 Pfam Myb/SANT-like DNA-binding domain 109 195 IPR044822 -
Hepe05g0345 522 FunFam trihelix transcription factor PTL-like 110 172 - -
Hepe05g0345 522 MobiDBLite consensus disorder prediction 398 415 - -
Hepe05g0345 522 MobiDBLite consensus disorder prediction 382 435 - -
Hepe05g0345 522 Coils Coil 304 331 - -
Hepe05g0345 522 CDD GT1 109 174 - -
Hepe05g0345 522 Gene3D - 110 172 - -
Hepe05g0345 522 MobiDBLite consensus disorder prediction 460 485 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Hepe01g1080 Hepe-Chr1:75648721 Hepe05g0345 Hepe-Chr5:4216002 7.20e-51 dispersed
Hepe05g0345 Hepe-Chr5:4216002 Hepe10g1966 Hepe-Chr10:56627531 1.63e-35 dispersed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
55560 PF13837 Myb_DNA-bind_4 1.50E-18 CL0123 Hepe TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hepe05g0345 - - - 0.0