Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Hepe05g0443 ATGGCGACTTACCTTCATGGCAATTCTGAGTTTCAATCTTCTGATGGCGGCCTTCAAACCCTCGTCTTAATGAATCCGAGCTACGTCCAATTCTCCGATTCCCCACCGCCGCCTCCTCCGCCTCACCCTAATCTCGTTTTCTTCAATTCTGCTACTGCTGCTAACACCTTCCCTACACAGAATCTGACTCAGGCGATTTCCCATCATACTCAACAATTCGTCGGCATCCCACTACCGCCGACGTCGCAAGACCATAATTCCCATTCTTTGAATACCCACCATGATATCTCTGCCTTGCACGGGTTTGTTCCGCGCGTTCAGCATAATATTTGGAATCAAATTGACCACTCCACGGCGGCGCGTGAAGCTTCACGCGCCCAGCAAGGTTTGTCTTTGAGCCTCTCTTCTCAGCATCCACCTGGTTTTGGGTCTAGAGATGTTCAATCGCAGACCCAACAAGCGGGTTCTGGTGAGGAGAACTTGCGGATCTCCGGCGGTGGATCGAATTCTTCGGCTTCCGGTATCACGAATGGCGTGGCGGGAATTCATGGCGTTTTAATTAGCTCGAAATATCTCAAGGCTGCACATGAACTTCTTGATGAGGTTGTCAATGTCACCCAAAATGGAATTAAGAATGAATCATCTCCAAAAAAGGCCACCGGAAATCAAAACAAGATGATCGGAGACGCATCGGCAGCTACTGCGACTGCAGACGGTTCTTTCGAAGGAGAAGCCGACGGTAAACGGGCCGTCGAGCTCTCAACCGCGGAGAGACAAGAAATTCAGATGAAGAAAGCAAAGCTCATAAGCATGCTGGACGAGGTGGAGCAGAGGTACAGACAGTACCACCACCAGATGCAGATAGTAGTATCTTCATTCGAGCAAGCGGCCGGTGCCGGGTCGGCGAGAACCTACACCGCGCTCGCGCTGCAGACGATTTCAAAGCAATTCCGTTGCTTAAAAGATGCCATCACCGGACAAATTCGAGCGGCGAACAAGAGTTTAGGAGAAGAAGAATGTCTTGGAAGAAAAATCGAAGGTTCCCGGTTGAAATTCGTCGATCACCATCTCCGGCAACAGCGAGCTCTGCAACAATTGGGCATGATCCAACACAATGCTTGGAGACCCCAAAGAGGCTTACCGGAGCGATCTGTTTCGATTCTTCGCGCTTGGCTTTTCGAACACTTTCTCCACCCTTATCCTAAAGATTCAGACAAACACATGCTTGCTAAGCAAACAGGGCTCACCAGAAGCCAGGTTTCAAATTGGTTCATAAATGCTCGAGTTCGACTATGGAAGCCAATGGTGGAAGAGATGTACATGGAGGAAATCAAAGAACAAGAACAGAACAACGGCGGCGGATCGGCACCGGAAAAAAGCAACGACGATTCCGGTTCAAAATCAATAGCTGCTCCACCACAACCAGAGACAAAAAGCCCCAATTCATCTCCAAACCAAAACGTCCATCCTTCAATCTCAATTTCAACCTCCTCCGGCGGTAACGTCCGAAACCCATCTGGATTTACCCTCATCGGAGCCTCATCGGAGCTCGACGGAATCACTCAAGGAAGCCCCAAAAAACAGAGAGGTCCTGAAATCCTCCATTCCTCAAACCGTTTCATAAACATGGACGACATCAAACCCCGAGAAGAAGAACAACAAAATCAAAACCAAAACCATCATTTCGCAATGAAATTCGACGAGGAGAGACAAAACAGAGATGGGTATTCATTTCTAAGCCAACCCCATTTCAACATAGGCGGCTTCGGGCAATACCCGATCGGCGAAATCGCCGATCAGTTCACGACAAGATTCTCCGGTAACAATGGCGTCTCTCTGACTCTAGGACTTCCCCATTGTGAAAATCTGTCTCTAAATGCAGCGACCCACCAAACCTTTCTCCCAAATCAGAGCATCCATTTAGGAAGAAGAACAGAAATTGGAAAAACCAATGATTTTTCAACCATAAACGCTTCTTCAGCTCATTCTTCCACTGCTTTTGAGACAATCAACATCCAAAATGGAAAAAGGTTTGCAGCTCAATTACTTCCAGATTTTGTGGCCTAA 2067 48.04 MATYLHGNSEFQSSDGGLQTLVLMNPSYVQFSDSPPPPPPPHPNLVFFNSATAANTFPTQNLTQAISHHTQQFVGIPLPPTSQDHNSHSLNTHHDISALHGFVPRVQHNIWNQIDHSTAAREASRAQQGLSLSLSSQHPPGFGSRDVQSQTQQAGSGEENLRISGGGSNSSASGITNGVAGIHGVLISSKYLKAAHELLDEVVNVTQNGIKNESSPKKATGNQNKMIGDASAATATADGSFEGEADGKRAVELSTAERQEIQMKKAKLISMLDEVEQRYRQYHHQMQIVVSSFEQAAGAGSARTYTALALQTISKQFRCLKDAITGQIRAANKSLGEEECLGRKIEGSRLKFVDHHLRQQRALQQLGMIQHNAWRPQRGLPERSVSILRAWLFEHFLHPYPKDSDKHMLAKQTGLTRSQVSNWFINARVRLWKPMVEEMYMEEIKEQEQNNGGGSAPEKSNDDSGSKSIAAPPQPETKSPNSSPNQNVHPSISISTSSGGNVRNPSGFTLIGASSELDGITQGSPKKQRGPEILHSSNRFINMDDIKPREEEQQNQNQNHHFAMKFDEERQNRDGYSFLSQPHFNIGGFGQYPIGEIADQFTTRFSGNNGVSLTLGLPHCENLSLNAATHQTFLPNQSIHLGRRTEIGKTNDFSTINASSAHSSTAFETINIQNGKRFAAQLLPDFVA 688
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 5748508 5752119 + Hsped.05g04430.1 Hepe05g0443 569708
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Hepe05g0443 688 PANTHER HOMEOBOX PROTEIN TRANSCRIPTION FACTORS 121 476 IPR050224 GO:0000978(PANTHER)|GO:0000981(PANTHER)|GO:0006357(PANTHER)
Hepe05g0443 688 Gene3D - 377 453 - -
Hepe05g0443 688 Coils Coil 258 278 - -
Hepe05g0443 688 Pfam Homeobox KN domain 391 430 IPR008422 GO:0003677(InterPro)|GO:0006355(InterPro)
Hepe05g0443 688 MobiDBLite consensus disorder prediction 445 538 - -
Hepe05g0443 688 SMART prehox3 180 326 IPR006563 -
Hepe05g0443 688 ProSiteProfiles 'Homeobox' domain profile. 371 434 IPR001356 GO:0003677(InterPro)
Hepe05g0443 688 SUPERFAMILY Homeodomain-like 375 441 IPR009057 -
Hepe05g0443 688 MobiDBLite consensus disorder prediction 122 170 - -
Hepe05g0443 688 SMART HOX_1 374 438 IPR001356 GO:0003677(InterPro)
Hepe05g0443 688 MobiDBLite consensus disorder prediction 448 522 - -
Hepe05g0443 688 CDD homeodomain 374 435 IPR001356 GO:0003677(InterPro)
Hepe05g0443 688 Pfam Associated with HOX 186 325 IPR006563 -
Hepe05g0443 688 FunFam BEL1-like homeodomain protein 9 377 439 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Hepe05g0443 Hepe-Chr5:5748508 HepeContig66g0009 Hepe-ChrContig66:2695455 4.91e-74 dispersed
Hepe03g1615 Hepe-Chr3:73054695 Hepe05g0443 Hepe-Chr5:5748508 1.12e-73 transposed
Hepe08g0990 Hepe-Chr8:9375544 Hepe05g0443 Hepe-Chr5:5748508 3.83e-97 transposed
Hepe08g1385 Hepe-Chr8:16277432 Hepe05g0443 Hepe-Chr5:5748508 9.79e-42 transposed
Hepe05g0443 Hepe-Chr5:5748508 Hepe08g0194 Hepe-Chr8:1759131 6.49e-168 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
55571 PF07526 POX 3.60E-49 No_clan Hepe TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hepe05g0443 - - - 0.0