Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Hepe05g0523 | ATGATCCGAAGTGAAGGGCAAAAGGGTACAAAGTTCGGCGAAGACCGAAAAGTTAGAGTGGTGGATCCAAGGAGAATGCGACGCGTGGCAGATAGAGAGACCGTAGATGAGAGATTAAAAATAGACGGTCAGGATTTACGCAAAGGTATCATCAATCAATCAACCAATCAATCGTTTCTTACATCTTTTGATTTTGATTTTCTCCGAGGAGACGCTCGCAACTGTTTGATCTTGTTCTTCGTGTTATTACTATTGAAGATGGCAGATTCCGAGGATATTCAGCCTCTCGTTTGCGATAATGGAACTGGAATGGTCAAGGCTGGATTTGCTGGAGACGATGCTCCAAGGGCTGTGTTCCCTAGCATTGTAGGTCGCCCCAGGCACACTGGTGTTATGGTTGGTATGGGCCAAAAGGATGCCTATGTTGGTGATGAAGCTCAATCGAAGAGAGGTATTTTGACTTTGAAATATCCCATTGAGCATGGTATCGTTAGCAATTGGGATGATATGGAGAAAATTTGGCATCATACTTTCTACAACGAGCTTCGAGTTGCTCCAGAAGAACATCCAGTTCTGCTCACAGAAGCACCCTTGAATCCCAAGGCGAACAGAGAGAAAATGACCCAAATCATGTTTGAGACTTTCAACACTCCCGCTATGTATGTTGCTATCCAGGCCGTCCTTTCCCTTTATGCCAGTGGTCGCACAACTGGGATCGTTATGGATTCTGGTGATGGTGTCAGCCACACAGTTCCAATCTACGAAGGGTATGCTCTCCCACATGCCATCCTCCGTCTAGATCTTGCTGGCCGTGATCTCACAGATGATGATGGTAGATAA | 840 | 45.71 | MIRSEGQKGTKFGEDRKVRVVDPRRMRRVADRETVDERLKIDGQDLRKGIINQSTNQSFLTSFDFDFLRGDARNCLILFFVLLLLKMADSEDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVMDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDDDGR | 279 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
5 | 7215796 | 7219236 | + | Hsped.05g05230.1 | Hepe05g0523 | 569788 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Hepe05g0523 | 279 | SUPERFAMILY | Actin-like ATPase domain | 234 | 275 | IPR043129 | - | |
Hepe05g0523 | 279 | Pfam | Actin | 91 | 275 | IPR004000 | - | |
Hepe05g0523 | 279 | PANTHER | ACTIN | 94 | 275 | IPR004000 | GO:0005737(PANTHER) | |
Hepe05g0523 | 279 | Gene3D | Actin; Chain A, domain 2 | 122 | 159 | - | - | |
Hepe05g0523 | 279 | CDD | NBD_sugar-kinase_HSP70_actin | 96 | 269 | - | - | |
Hepe05g0523 | 279 | SMART | actin_3 | 93 | 279 | IPR004000 | - | |
Hepe05g0523 | 279 | FunFam | Actin, alpha skeletal muscle | 89 | 252 | - | - | |
Hepe05g0523 | 279 | FunFam | Actin, alpha skeletal muscle | 122 | 159 | - | - | |
Hepe05g0523 | 279 | PRINTS | Actin signature | 228 | 247 | IPR004000 | - | |
Hepe05g0523 | 279 | PRINTS | Actin signature | 149 | 171 | IPR004000 | - | |
Hepe05g0523 | 279 | PRINTS | Actin signature | 203 | 216 | IPR004000 | - | |
Hepe05g0523 | 279 | PRINTS | Actin signature | 114 | 123 | IPR004000 | - | |
Hepe05g0523 | 279 | PRINTS | Actin signature | 137 | 148 | IPR004000 | - | |
Hepe05g0523 | 279 | ProSitePatterns | Actins and actin-related proteins signature. | 192 | 204 | IPR020902 | - | |
Hepe05g0523 | 279 | ProSitePatterns | Actins signature 1. | 141 | 151 | IPR004001 | - | |
Hepe05g0523 | 279 | Gene3D | - | 95 | 240 | - | - | |
Hepe05g0523 | 279 | SUPERFAMILY | Actin-like ATPase domain | 92 | 240 | IPR043129 | - | |
Hepe05g0523 | 279 | Gene3D | - | 241 | 269 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Hepe05g0523 | Hepe-Chr5:7215796 | Hepe08g1258 | Hepe-Chr8:13509601 | 4.68e-134 | dispersed | |
Hepe05g0523 | Hepe-Chr5:7215796 | Hepe09g1698 | Hepe-Chr9:51555315 | 4.46e-38 | transposed |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Hepe05g0523 | K10355 | - | csv:101214247 | 387.882 |