Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Hepe05g0524 ATGTTTTCGTGGCTGGCAAGGATGGCATCGGCTTGTTGGAAACCAGTGAGACAGTATGCCCGTATGAACAAGGATGATGATGAAGATTCTTCGTTAGAGGATACTTTGTTGTGGAGCAGAGAGCTTGAAAAACATTCTTATGGGGAATTTTCTTTCGCTGTGGTTCAGGCGAATGAGGTAATTGAAGATCATAGTCAGGTTGAGACTGGCCGGGATTCTACTTTCGTCGGTGTTTATGATGGCCATGGTGGCCCTGATGCTTCTCGCTTTATCTGTGATCATCTTTACAAGAATCTAATGAGGCTTGCTCAAGACAATGGAACCATAACCGAAGATATCATTCGAAGTTCATTTTCTGCAACTGAGGAAGGGTTTCTTACTCTTGTACGTCGGTCATTGGGAATAAAACCTACAATTGCAGCAATAGGATCTTGTTGCCTGGTGGGAGTTATCTGGAGAGGTACATTATTCGTCGGTAACGTCGGTGATTCCCGGGCTGTTATTGGTTCTTTAGGTAAATCTAATAAGATAGTTGCAGAACAGTTGACAAGGGATCACAATGCAAGTATTGAGGAGGTTAGACAAGAACTCAGGTCCTTGCATCCAGATGACTCACATATCGTTGTTATGAAGCACGGAGTCTGGCGTATAAAAGGCATAATTCAGGTTTCCAGATCGATAGGTGATGCATATTTAAAAAAGCCAGAGTTCTCTCTCGATCCATCCTTTCCACGATTCCACCTTGCGGAGCCTCTTCGACGGCCTGTTCTTACTGCCGAACCATCGTTAAGTGCAAGAGTTCTACAACCTAATGACAAATTTCTCATATTTGCATCTGATGGTCTTTGGGAGCATCTATCGAATCAACAAGCTGTCGAGATTGCGTATAATAACCCACGAGCAGGAATCGCAAAAAGACTCATCAAAACAGCACTAACTGTGGCTGCAAAGAAGAGGGAGATGAGATACGATGATATCAAGAAGCTCGAAAAAGGCATACGACGGTTCTTTCACGACGATATCACAGTCGTCGTCATCTTTCTAGACCATGAGTTGCAAGGAAAGAAAGCACATGTACCAGAATTATCCGTTCGTGGGTTCACTGACACCGTTGGACCGTCGAATTTCAACGTTCTTCGAGGCATCGATGATAACGGAAGGTCTGTTGGCTGA 1173 44.08 MFSWLARMASACWKPVRQYARMNKDDDEDSSLEDTLLWSRELEKHSYGEFSFAVVQANEVIEDHSQVETGRDSTFVGVYDGHGGPDASRFICDHLYKNLMRLAQDNGTITEDIIRSSFSATEEGFLTLVRRSLGIKPTIAAIGSCCLVGVIWRGTLFVGNVGDSRAVIGSLGKSNKIVAEQLTRDHNASIEEVRQELRSLHPDDSHIVVMKHGVWRIKGIIQVSRSIGDAYLKKPEFSLDPSFPRFHLAEPLRRPVLTAEPSLSARVLQPNDKFLIFASDGLWEHLSNQQAVEIAYNNPRAGIAKRLIKTALTVAAKKREMRYDDIKKLEKGIRRFFHDDITVVVIFLDHELQGKKAHVPELSVRGFTDTVGPSNFNVLRGIDDNGRSVG 390
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 7220977 7224642 - Hsped.05g05240.1 Hepe05g0524 569789
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Hepe05g0524 390 Pfam Protein phosphatase 2C 70 317 IPR001932 -
Hepe05g0524 390 SUPERFAMILY PP2C-like 51 349 IPR036457 -
Hepe05g0524 390 ProSitePatterns PPM-type phosphatase domain signature. 75 83 IPR000222 GO:0043169(InterPro)
Hepe05g0524 390 Gene3D - 25 358 IPR036457 -
Hepe05g0524 390 SMART PP2C_4 43 346 IPR001932 -
Hepe05g0524 390 FunFam Probable protein phosphatase 2C 42 40 356 - -
Hepe05g0524 390 PANTHER PROTEIN PHOSPHATASE 40 347 IPR015655 GO:0004722(InterPro)|GO:0004722(PANTHER)|GO:0006470(InterPro)|GO:0035970(PANTHER)
Hepe05g0524 390 CDD PP2Cc 47 348 IPR001932 -
Hepe05g0524 390 ProSiteProfiles PPM-type phosphatase domain profile. 49 348 IPR001932 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Hepe02g0640 Hepe-Chr2:6678003 Hepe05g0524 Hepe-Chr5:7220977 1.13e-132 dispersed
Hepe05g0524 Hepe-Chr5:7220977 Hepe06g0898 Hepe-Chr6:56257293 3.84e-133 dispersed
Hepe05g0524 Hepe-Chr5:7220977 Hepe08g0307 Hepe-Chr8:2764993 6.75e-141 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hepe05g0524 K01102 - csv:101222146 728.013