Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Hepe05g0526 ATGGAAATCGACTCACACAACAATCTCAACCGCAACCACTGTACCTATCAAATATCGGATGAGCAGTACAAGGTTCAGAAGGAGACGTACAAGGGCCAGCAATACAGTCACATTTACTTTGTTCGACTCCATTTGATGAGAACCATACTCCATTCACTTGTCTCTAAGTGGAAACCTCATTTACCGGTTAGTACCGTATTGGGATTGGAGGAAGGCAAGGAATGTGTCATTGTTGGAACCCTCTACAAGCACATGAAACTTAAACCTATGATTCTGGATGAGTATTCAAAGGAGAGATCTGTCACCCCACTTGTCAAGCCACATAACTTTATGCACCCAGATGATCATCTAGTTCTGGAAGATGAAAGTGGGAGAGTCAAGCTTTCTGGGGCTGGGCTTATACCTTCTGTATATGTTACAGGGATAGTTGTTGCATTGCATGGAAAGGAAACTTGCGTGGGTGACTTTTTGGTTTTGGACATCCTAGAAGCTGGCTTGCCACCGCAGATAGAGCGGCCACTCATACCAAAAGATAAGTACGTGGTTTTTGTGTCGGGCCTAAGTATTGGGAGCAGCATCTCGAATCCTCTACAGTTTCAGCTCCTTGTTGATCATATAACAGGACATTTAGGGGATGAGAAGGAACAAGAGATCGCAGCTCAAATAGTTCACGTTGTCATTTGTGGGAATTCTGTTGAAATTTCTCGTGCAGTTTTAAATGGGCAGCATTTGTCTGCAAAGGACCAAACAAAGCTAACAGAACCGCTTAAAGAGCTAGATATCCTATTGAATCAGCTTGCTGCAGGTTTACCTGTGGACATCATGCCGGGTTCCAGTGACCCAGCCAATTTTGCCTTGCCTCAGCAGCCTTTGCACAGATGCCTTTTTCCTGGATCATCAGCCTATAATACTTTCAGATCTTGCACTAACCCTCATTGTTTTGAGCTCGATAATTTCAGGTTTCTTGGAACATCAGGTCAGAACATAGATGATCTTGAGAAGTACTCAGAGGCTAAAGATAAGCTTGAATTTATGGAGAGGACATTAAGATGGAGGCATCTGGCACCAACTACTCCAAATACTCTTGGTTGCTATCCTTTCACTGATCGAGATCCTTTCGTGGTTGAGAGCTGTCCACATGTTTATTTTATTGGCAATCAGGACAAGTTCGATACTCGATTAATAAAGGGATCTGAAGGGCAGATGGTAAGACTCATTTCGATTCCAAGATTTTGCGAGAAGGGAGTTGCCGTAATGCTTAACTTGAGAAATCTTGAATGCCACACTCTGAGTTTTGGGACTGAATTCAGCTGA 1314 43.3 MEIDSHNNLNRNHCTYQISDEQYKVQKETYKGQQYSHIYFVRLHLMRTILHSLVSKWKPHLPVSTVLGLEEGKECVIVGTLYKHMKLKPMILDEYSKERSVTPLVKPHNFMHPDDHLVLEDESGRVKLSGAGLIPSVYVTGIVVALHGKETCVGDFLVLDILEAGLPPQIERPLIPKDKYVVFVSGLSIGSSISNPLQFQLLVDHITGHLGDEKEQEIAAQIVHVVICGNSVEISRAVLNGQHLSAKDQTKLTEPLKELDILLNQLAAGLPVDIMPGSSDPANFALPQQPLHRCLFPGSSAYNTFRSCTNPHCFELDNFRFLGTSGQNIDDLEKYSEAKDKLEFMERTLRWRHLAPTTPNTLGCYPFTDRDPFVVESCPHVYFIGNQDKFDTRLIKGSEGQMVRLISIPRFCEKGVAVMLNLRNLECHTLSFGTEFS 437
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 7242566 7249327 - Hsped.05g05260.1 Hepe05g0526 569791
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Hepe05g0526 437 Pfam DNA polymerase delta subunit OB-fold domain 34 161 IPR040663 -
Hepe05g0526 437 FunFam DNA polymerase delta subunit 2 40 164 - -
Hepe05g0526 437 CDD MPP_PolD2_C 180 432 IPR041863 -
Hepe05g0526 437 Gene3D - 167 436 - -
Hepe05g0526 437 Gene3D - 41 164 - -
Hepe05g0526 437 Pfam DNA polymerase alpha/epsilon subunit B 181 392 IPR007185 GO:0003677(InterPro)|GO:0006260(InterPro)
Hepe05g0526 437 FunFam DNA polymerase delta small subunit 167 437 - -
Hepe05g0526 437 PANTHER DNA POLYMERASE DELTA SUBUNIT 2 6 430 IPR024826 GO:0006271(PANTHER)|GO:0042575(PANTHER)|GO:0043625(PANTHER)
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hepe05g0526 K02328 - csv:101221438 821.231