Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Hepe05g0540 ATGTATTATGATAGTGAGGAGAGGGCGTCCAACTTACCATATAGGTTGCAAGATAAGCGGCACAATGGACAAAATGTGTGGAGAATGCATCCTCCAAAGTCCACGAGTTCTGTTGAGGAAACCCTAAGTCGCGGCAATATTGTGGATTCATTCAAACTCCTAAACTTCTCCGAACGACAAAACAGTCTGAGGTTGCCGAGAAGAAAATTGTTCGAAGCTTGTCTGGATATGTACGAAGCTCTTCGCGACACCGTCCGCAAAATGGAAACACTATTCCCAGAGGAATCAACCAACGAACACAAAACCACGACAGAGACACAAACCGGTCGAACTTCTTCGACATTCTGTGATATGGAAAACACCATCAAAGCCGACACCGGTAAAACACCGGTACCAGGCGGCGCGGTCCATCCATTGACTCGAAACACCATAGAAGGACTGGAACATATTTTGAAAGATCATCCAAAGATCGAGCGAGGAGCCGACTTCGAAGCCGAACTCACTCGAGTAATTGAGCTCCTTGAGTCAAATCTGGAAGCAAAATCAAAATTATACAAAGACCCACAACTGAGTTCGATCTTCATGATGAACAATGGCCGATACATCTTGCAGAAAATCAAAGGATCCGAGGAGATTCACGAACTGGTCGGCGATACGTGGTACCGGAAGAGATCTTCGGATCTCCGTCAATATCATAAGAGTTACCAGAGAGAGACGTGGGGGAGATTGTTGCAATTTTTGAACCACGACGGAATGACATCGGCGCCGAACGGGAAACCGCTCAAGTCGGTGCTCAAGGATAGGTTTAAAGGATTCAACACCCTGTTCGAAGAGATTCACAAAACACAGAGCTCCTGGATCATAACCGATGAGCAGCTTCAATCCGAGCTCCGAGTATCGATATCGTCCCTGATGATTCCGGCCTACAGATCATTCCTAGGGAGGTTTGCGCAGTACTTGAATCCGGGGAGACAAACGGACAAATACATTAAGTTTCAGCCTGAAGATATAGAAGCTTACATTGATGATCTATTCCATGGACATCCAACCAAGAACAATATAACTTCAATTGATGAAGGAGGGAACTGCCACATGGGCTACATTTTGAGGCAAGTTCCAGAAGAGTCGACGTCGATCAGCAACCTAGTTTCCAAGTTCCAGAAGAGTCGACGTCGACCCATCAAGAAGATGAACCGCTTGAATCGAGTCCGTACAAATCAAGACATTTGGAGATTCAAAACATGCTTAGAGCTTCCGGGATGCAGGCCTGAATCTGCATCCAAAGGTGAAAGAGCTTCAGGTAAACATTTCGCCAGTGCGTTGCTACTGCTTTACCAGATCCATCCCTGA 1350 46.15 MYYDSEERASNLPYRLQDKRHNGQNVWRMHPPKSTSSVEETLSRGNIVDSFKLLNFSERQNSLRLPRRKLFEACLDMYEALRDTVRKMETLFPEESTNEHKTTTETQTGRTSSTFCDMENTIKADTGKTPVPGGAVHPLTRNTIEGLEHILKDHPKIERGADFEAELTRVIELLESNLEAKSKLYKDPQLSSIFMMNNGRYILQKIKGSEEIHELVGDTWYRKRSSDLRQYHKSYQRETWGRLLQFLNHDGMTSAPNGKPLKSVLKDRFKGFNTLFEEIHKTQSSWIITDEQLQSELRVSISSLMIPAYRSFLGRFAQYLNPGRQTDKYIKFQPEDIEAYIDDLFHGHPTKNNITSIDEGGNCHMGYILRQVPEESTSISNLVSKFQKSRRRPIKKMNRLNRVRTNQDIWRFKTCLELPGCRPESASKGERASGKHFASALLLLYQIHP 449
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 7463911 7466572 + Hsped.05g05400.1 Hepe05g0540 569805
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Hepe05g0540 449 SUPERFAMILY Cullin repeat-like 53 346 IPR016159 -
Hepe05g0540 449 PANTHER EXOCYST COMPLEX PROTEIN EXO70 51 347 IPR004140 GO:0000145(PANTHER)|GO:0000145(InterPro)|GO:0006887(PANTHER)|GO:0006887(InterPro)
Hepe05g0540 449 MobiDBLite consensus disorder prediction 11 25 - -
Hepe05g0540 449 MobiDBLite consensus disorder prediction 90 112 - -
Hepe05g0540 449 Pfam Exo70 exocyst complex subunit C-terminal 44 343 IPR046364 GO:0000145(InterPro)|GO:0005546(InterPro)|GO:0006887(InterPro)
Hepe05g0540 449 Gene3D Exocyst complex component Exo70 41 354 - -
Hepe05g0540 449 MobiDBLite consensus disorder prediction 1 40 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Hepe05g0540 Hepe-Chr5:7463911 Hepe05g1167 Hepe-Chr5:57304545 5.09e-90 dispersed
Hepe05g0540 Hepe-Chr5:7463911 Hepe09g0051 Hepe-Chr9:422913 1.25e-52 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hepe05g0540 K07195 - csv:101206040 404.831