Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Hepe05g0553 ATGGCTTCTTCAAATATTAAAAGCAGCATCATCAGCCAACAAGAACAAGAACAAAAACAACAACAACAACAACATCAACAACAACATCAAATTTCACAAAGTCCAAGCTTTGTCATCTCATCAAATTCAAAAAATTCCTCATTATTCAACTTTCAAAACCACAACTTTCATGATCATCATCCTCATCATCATCAATTACCCTTCTCCATGAATCTCCCTTCCATCTCTCCAAATTTCATCAGCAAAGATGGAGGAGGAGATGATTTGGGAGAATTGGATCAAGCTCTTTTTCTCTATCTGGATGGACAAGAACCCTCTACAACTACTACTCAAGATCAAAGACAGAGCTTAGGCATGAGACCTCCGACGTTGAACATCTTCCCGTCGCAGCCGATGCACGTCGACCCTTTGCCAACAAAAGGAAACACAGCATTGATGAACCATGGTGATTCAAAGATCAAAGCATCAGAGCCGTCCAAAGAGTTGGCCAACCAACGCAGCAATGGAGCCACTGCATCTGGACCAGCCCCAAACCAAACCACCACAACAACAACCGAACCTCATGCCAAACCTCCAAAACGTGAGGCCAACAAGAAAGGGCTAACCTCAAGCTCAGAGCAAGAAGGACCCAAAACTCCAGACCCCAAGACACTGAGACGACTGGCTCAGAATCGAGAGGCTGCAAGGAAAAGCAGGCTGAGAAAAAAGGCGTATGTTCAGCAGTTGGAGATGAGTAGGATTAAGCTCACGCAGCTTGAGCAAGAGTTACAAAGAGCAAGAACTCAGGGCATGTTTATGGGTGGAGGAGCTGCCATGTTAGGAGCTGACCAAGGACTTCCCGCTGGCTTCCATAACCTCAGCTCCGATGCTGCAGTGTTCGACATCGAGTACGGGCGGTGGCAGGAGGAGCACCACCGACTGATGTGCGAGCTCCGAGCAGCGGTACAGGAGCACCTACCGGAGAACGAGCTGCGGCTGTATGTCGACAACTGCCTAGCCCATTACGACGAGGTTATGAACTTGAAGATGATGGTGGCTAAGTCCGACGTCTTCCACCTTGTCTCCGGCATGTGGAAGACGCCGGCAGAGAGATGCTTCATGTGGATGGGTGATTTTAGGCCCTCTGAGCTCATTAAGATAATAATGGGTCAAATAGAGCCATTAACAGAGCATCAAATATTGAACATTTGTGGATTGCAACAATCAACACAAGAGAGTGAAGAAGCATTGTCTCAAGGGCTTGATGCCCTTAACCAGTCCTTATCAGACACCATCACCTCTGATTCATTGAGTAGCCCTCCCAATATGGCTAACTACATGGGGCAGATGACCTTAGCCATCAGCAAGCTTTCTACCCTTGAAGCCTTTGTAAGACAGGCAGACAATTTGAGACACCAAACAATTCACCGATTGATCCAAATGTTGACAATCCGTCAAGCTGCAAGGTGTTTGCTAGCTATTGCAGAGTATTTTCATCGGCTTCGAGCTCTAAGCTCTTTGTGGTTGGCTCGACCAAGGCAGGATTGA 1527 46.95 MASSNIKSSIISQQEQEQKQQQQQHQQQHQISQSPSFVISSNSKNSSLFNFQNHNFHDHHPHHHQLPFSMNLPSISPNFISKDGGGDDLGELDQALFLYLDGQEPSTTTTQDQRQSLGMRPPTLNIFPSQPMHVDPLPTKGNTALMNHGDSKIKASEPSKELANQRSNGATASGPAPNQTTTTTTEPHAKPPKREANKKGLTSSSEQEGPKTPDPKTLRRLAQNREAARKSRLRKKAYVQQLEMSRIKLTQLEQELQRARTQGMFMGGGAAMLGADQGLPAGFHNLSSDAAVFDIEYGRWQEEHHRLMCELRAAVQEHLPENELRLYVDNCLAHYDEVMNLKMMVAKSDVFHLVSGMWKTPAERCFMWMGDFRPSELIKIIMGQIEPLTEHQILNICGLQQSTQESEEALSQGLDALNQSLSDTITSDSLSSPPNMANYMGQMTLAISKLSTLEAFVRQADNLRHQTIHRLIQMLTIRQAARCLLAIAEYFHRLRALSSLWLARPRQD 508
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 7671292 7682247 + Hsped.05g05530.1 Hepe05g0553 569818
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Hepe05g0553 508 Pfam Seed dormancy control 308 382 IPR025422 GO:0006351(InterPro)|GO:0043565(InterPro)
Hepe05g0553 508 Pfam Basic region leucine zipper 213 257 IPR004827 GO:0003700(InterPro)|GO:0006355(InterPro)
Hepe05g0553 508 SUPERFAMILY Leucine zipper domain 216 258 IPR046347 GO:0003700(InterPro)|GO:0006355(InterPro)
Hepe05g0553 508 ProSiteProfiles DOG1 domain profile. 290 504 IPR025422 GO:0006351(InterPro)|GO:0043565(InterPro)
Hepe05g0553 508 Gene3D - 215 264 - -
Hepe05g0553 508 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 219 234 IPR004827 GO:0003700(InterPro)|GO:0006355(InterPro)
Hepe05g0553 508 FunFam BZIP family transcription factor 215 264 - -
Hepe05g0553 508 MobiDBLite consensus disorder prediction 1 69 - -
Hepe05g0553 508 MobiDBLite consensus disorder prediction 1 54 - -
Hepe05g0553 508 CDD bZIP_HBP1b-like 216 268 - -
Hepe05g0553 508 PANTHER TRANSCRIPTION FACTOR TGA9 123 507 - -
Hepe05g0553 508 MobiDBLite consensus disorder prediction 102 219 - -
Hepe05g0553 508 MobiDBLite consensus disorder prediction 102 123 - -
Hepe05g0553 508 MobiDBLite consensus disorder prediction 160 187 - -
Hepe05g0553 508 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 214 258 IPR004827 GO:0003700(InterPro)|GO:0006355(InterPro)
Hepe05g0553 508 SMART brlzneu 212 275 IPR004827 GO:0003700(InterPro)|GO:0006355(InterPro)
Hepe05g0553 508 Coils Coil 235 262 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Hepe05g0553 Hepe-Chr5:7671292 Hepe10g0543 Hepe-Chr10:6451084 6.28e-111 dispersed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
55583 PF14144 DOG1 7.30E-32 No_clan Hepe TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hepe05g0553 K14431 - csv:101204923 803.512