Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Hepe05g0557 ATGTCTTCAAAGGTAAAGAAGAACTCAAAGACACTCTCTAGATTGTCAAACTCGAACAAATCTCAATCTCCATTGCCACGATTGTCAATGCCTTCTGCCTCTGAAGTTTGTGAAGATGATTTTCTTTCCTCTATTGAAGAAGCTTCAAGTAAATATCCTTCTTTGATTACTAAATCTGCTTTTGTTGGGAGAGTTACTAATGCTGCCGTTCAATGTACCGCCGATAAAGTTTGGCTTTCTGAATCTTCTATGGTTTCTTCTAGCCTCACCCAAGGGGCTATCGTCTCGGTAGCACTACTTAGTTCCGAGGGAGGGAACAATTTGAAAGGCTTTCCTCTTTCTTCATTAGCAGATGAATGTGGTAGGCACTTCGGGGTTGATCATGGAGATTCATTCATCAACGAAGCGGGAAATTACTTTGCTCTTGCGAGAATTTTCTCTTCTAGTAAGGAGTTAAATGACGGAGTGCAATTATCAACAAACCTCTCATACACCTTGGGTTGCCCTACAATAGGCCGTGTTGTGTTTATCTCCCCTTTAAAAAACCACCTATGCAATGGCCCGTTAAATGAAAATGGGAAACTGAAGGGCACAGAAGTTGAATCTCTGAGAATATACAATTGTAAGGAACTATTCTTGGAGCTAGCTTCTTCAACCAATATATCAACAAAAGAGAACTTATTCTCTTCCTCAACTATTTATTCAAGGAAGGTTCATGGTTGTAGTAAAAATGGTAATTTAGCATCCCCAAGCACCATGCTATCTGCATCTCCTAAATGTGATGATGTGGTATCAAATTTACTTGTAGAGAGTCCATGTGCTCATTCACTTATTAAGGAGGCCTTAGGAGATGATAGTGTTAAAAGAACTTTGCAGACGATTGCTTCCAATGAGTTGTATAAACGTTGTTTGCTGCGTGGTAATCTTGTAACTATCCCAGTGCTTTCAGATCTTTGCACATTCCATGTGAGGGGTGGTAAAGGACCGTCAACATATGAGGACTCTTATGATTCTATGCCCAATGGAAGCGACCATCATTTTGAACCTTTTGTGTCAAATGAATATATGGATTATGCTTTCAGTATAGATCAACTGACCAAAGTATTTATAAATGTTCAATCAACCACGAACTCAGACATGGTGCAAGAAAAAGTTCCATCAAATGTGGAACCTCAAAATCTAAATATTAGAGCTAAAGTTAAGCGTGAAGTTTGGAAATTGGGCGGTCTTTCTAAAGAATATTCAGTTTTGAAGGATATTATAATTGCCTCATCATTAAATAGCACTGTGTCAAGCCTTGGTTTACGAACCACAAAGGGAGTACTTCTTCATGGTCCTCCTGGTACTGGAAAAACTTCCTTGGCTAAATTATGTGCTCATGACGCTGGTGTCAACTTATTCTATTTGAATGGACCTGAAATTATAAGTCAATATCATGGGGAAAGTGAACAGGCATTGCACGAAGTTTTCGAGGTGGCAAGCCAAGCTGCACCTGCTGTGATATTAATTGATGAGTTGGATGCTATTGCGCCTACAAGAAAAGATGGAGGTGAAGAGCTGTCTCAAAGAATTGTTGCTACATTGCTTAATGTAATGGATGGAATCAACCGAAGTGGTGGGCCACTTGTAATTGCTTCTACCAACAGGCCTGATAGCATTGAGCCTGCACTAAGGCGGCCTGGGAGACTTGACCGGGAAATTGAAATAGGTGTGCCATCTCCCAATCAACGGTTGGATATTCTACATACAATACTAGGTGATATGGAGCACTCTCTTTCAGACCTGCAAGTTCAACATCTAGCTATGGTTACACATGGTTTTGTGGGTGCTGATTTGGCTGCCCTTTGCAATGAGTCTGCCTTAGTTTGTATAAGGCGTTATCACGAGTTTAAAAATTCTACTGATTGCCTTAGTTCTGGTAGATCTGTTATAGCAGAGGAACAACATAAGTTTACCAAGGTGGAGCACAAAGCAAATGTTGATGATATGATTTTAGAACCTGTTTTCTCAAAAGATGCGAGAAGTATATCAGGGGTTTGCCCAAATTTAGCGTCTTCATCATTCTCTGAATATACTCTTACATCTGAGACTCTAACAAGTGTGTCCTCGAATGAAGTGGTAGCTGATAGTGAGGATACTTTTAACTCTTCTGAAATCAAGAGTATATTGAAGGTTGTTTTTGAAGATTTTGAGATGGCTAGAATGAAAGTGAGGCCTAGTGCCATGCGAGAGGTCATACTTGAGGTTCCAAAGGTAAAATGGGAAGATATTGGTGGACAAAGGGAGGTTAAGGTTCAATTAATGGAGGCAGTGGAATGGCCTCAAAAACATCAGGATGCATTCAAACGAATAGGGACTCGACCTCCAACAGGAGTGTTAATGTTTGGTCCTCCTGGATGTAGCAAAACCCTCATGGCACGTGCTGTAGCCTCTGAAGCAGGACTAAATTTCCTTGCAGTAAAGGGCCCAGAACTTTTCAGTAAATGGGTTGGTGAATCTGAGAAGGCAGTTAGATCTCTATTTGCTAAGGCAAGAGCTAATGCCCCATCAATCATATTTTTTGATGAAATTGATGGTCTTGCTGTCATTCGTGGGAAGGAAAGTGATGGGGTTTCTGTCTCTGATAGAGTTATGAGTCAACTTCTTGTTGAATTGGATGGTTTACATCAGAGAGTTGGTGTTACTGTCATTGCAGCTACCAATCGTCCAGATAAGATTGATCCAGCCCTTCTAAGGCCAGGACGTTTTGATCGGTTGCTACATGTTGGGCCTCCAAATGAATCTGAACGAGAAGAGATATTTCGTATCCATTTGTGCAAAATTCCTTGCAGCCCAGATGTCAGTATGAGGAAGTTGGCTTCTCTTACTCAAGGCTGTACAGGGGCTGACATATCATTAATCTGCAGAGAAGCAGCTTTATTTGCCCTTGAGGAGAACCTTGACGTTTCAAAAATAAATATGCAACATTTAGAAAACGCAGTTAGACACATCAAGCCATCTGCAACTGAACCTTATCAAGAACTATCATCTAGGTTTCAAAGGCTTGTTTGTTCTAGCTCACAAGGAGCTAATGTAGTGTGTCAGCAGTCACGGTCTAACAGGTTTTCTATTTGGTCCCTTGTAAAATCGGTTGTGTTACTTTTTTCTCGGTTTCCAGCTCGTGTTCATCTCTTGCTTGAAGGCTTCAAATGA 3192 40.73 MSSKVKKNSKTLSRLSNSNKSQSPLPRLSMPSASEVCEDDFLSSIEEASSKYPSLITKSAFVGRVTNAAVQCTADKVWLSESSMVSSSLTQGAIVSVALLSSEGGNNLKGFPLSSLADECGRHFGVDHGDSFINEAGNYFALARIFSSSKELNDGVQLSTNLSYTLGCPTIGRVVFISPLKNHLCNGPLNENGKLKGTEVESLRIYNCKELFLELASSTNISTKENLFSSSTIYSRKVHGCSKNGNLASPSTMLSASPKCDDVVSNLLVESPCAHSLIKEALGDDSVKRTLQTIASNELYKRCLLRGNLVTIPVLSDLCTFHVRGGKGPSTYEDSYDSMPNGSDHHFEPFVSNEYMDYAFSIDQLTKVFINVQSTTNSDMVQEKVPSNVEPQNLNIRAKVKREVWKLGGLSKEYSVLKDIIIASSLNSTVSSLGLRTTKGVLLHGPPGTGKTSLAKLCAHDAGVNLFYLNGPEIISQYHGESEQALHEVFEVASQAAPAVILIDELDAIAPTRKDGGEELSQRIVATLLNVMDGINRSGGPLVIASTNRPDSIEPALRRPGRLDREIEIGVPSPNQRLDILHTILGDMEHSLSDLQVQHLAMVTHGFVGADLAALCNESALVCIRRYHEFKNSTDCLSSGRSVIAEEQHKFTKVEHKANVDDMILEPVFSKDARSISGVCPNLASSSFSEYTLTSETLTSVSSNEVVADSEDTFNSSEIKSILKVVFEDFEMARMKVRPSAMREVILEVPKVKWEDIGGQREVKVQLMEAVEWPQKHQDAFKRIGTRPPTGVLMFGPPGCSKTLMARAVASEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAPSIIFFDEIDGLAVIRGKESDGVSVSDRVMSQLLVELDGLHQRVGVTVIAATNRPDKIDPALLRPGRFDRLLHVGPPNESEREEIFRIHLCKIPCSPDVSMRKLASLTQGCTGADISLICREAALFALEENLDVSKINMQHLENAVRHIKPSATEPYQELSSRFQRLVCSSSQGANVVCQQSRSNRFSIWSLVKSVVLLFSRFPARVHLLLEGFK 1063
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 7803900 7816632 + Hsped.05g05570.1 Hepe05g0557 569822
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Hepe05g0557 1063 FunFam spermatogenesis-associated protein 5-like protein 1 925 1009 - -
Hepe05g0557 1063 Gene3D - 386 570 IPR027417 -
Hepe05g0557 1063 ProSitePatterns AAA-protein family signature. 894 912 IPR003960 GO:0005524(InterPro)|GO:0016887(InterPro)
Hepe05g0557 1063 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 750 1007 IPR027417 -
Hepe05g0557 1063 Gene3D - 749 1002 IPR027417 -
Hepe05g0557 1063 MobiDBLite consensus disorder prediction 1 29 - -
Hepe05g0557 1063 Pfam AAA+ lid domain 946 991 IPR041569 -
Hepe05g0557 1063 Pfam AAA+ lid domain 594 634 IPR041569 -
Hepe05g0557 1063 CDD RecA-like_CDC48_NLV2_r1-like 406 569 - -
Hepe05g0557 1063 Gene3D - 571 735 - -
Hepe05g0557 1063 Coils Coil 973 993 - -
Hepe05g0557 1063 CDD RecA-like_CDC48_r2-like 763 922 - -
Hepe05g0557 1063 MobiDBLite consensus disorder prediction 1 32 - -
Hepe05g0557 1063 FunFam calmodulin-interacting protein 111 isoform X1 749 924 - -
Hepe05g0557 1063 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 407 632 IPR027417 -
Hepe05g0557 1063 Gene3D - 925 995 - -
Hepe05g0557 1063 PANTHER AAA-FAMILY ATPASE 77 1012 IPR050168 GO:0005737(PANTHER)|GO:0009507(PANTHER)|GO:0016887(PANTHER)
Hepe05g0557 1063 SMART AAA_5 437 573 IPR003593 GO:0016887(InterPro)
Hepe05g0557 1063 SMART AAA_5 788 926 IPR003593 GO:0016887(InterPro)
Hepe05g0557 1063 Pfam ATPase family associated with various cellular activities (AAA) 792 923 IPR003959 GO:0005524(InterPro)|GO:0016887(InterPro)
Hepe05g0557 1063 Pfam ATPase family associated with various cellular activities (AAA) 441 570 IPR003959 GO:0005524(InterPro)|GO:0016887(InterPro)
Hepe05g0557 1063 FunFam Putative vesicular transport protein (CDC48) 392 570 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Hepe05g0557 Hepe-Chr5:7803900 Hepe08g1493 Hepe-Chr8:18613695 1.93e-109 dispersed
Hepe05g0557 Hepe-Chr5:7803900 Hepe04g0951 Hepe-Chr4:63916313 1.41e-132 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hepe05g0557 - - - 0.0