Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Hepe05g0577 | ATGCTCCTGGACTCGGCCATGAATAACTTGACTGTTGAAACAGAAGATGCTTTTTCCAGTCTGCTTGAGCTTGCTGCGAATGATGACATCGATGCCTTTAAGAGATCGATTGAGCGCGACCCTTCTGGTATTGATGAGATTGGTTTATGGTATGGCCGCTTGCGAGGCTCGAAGCAGATGACTAATGAGCAGAGAACTCCTTTAATGGTTGCTGCTACTTATGGTAGCATTGAGGTTCTGAAGCTTATTCTTTCTCTTTCTTGTGCTGATGTGAACCGCGTTGTCGGTCTTGACAGAAGCACTGCCCTTCATTGTGCAGCCTCAGGTGGGGCTGCTAATGCTGTAGATATTGTGAAGCGGCTCTTAGCTGCTGGTGCTGATCCTAATGTGGTTGATGGGAATGGACATCGACCTGTTGATGTGATTGTTGCCCCCCTAAGGCACGCGGAGCTTAAATCAATCCTTACAGAACTTCTTAAAACTAATGGTTTGTCTGGTGAAGGAAATCTTGATGTTTTAACGGGCGCTAGAAATTCGTATTCTCCTCGCCCTTCGTCTCCTCTGAATGCCCCCTCATCCGCATCGGAGTTAGTTTCTTCTCCAACAAAGTCGAAACTAAGTGATTTTCCTATGTATTCTGCATCTGAGAAGAAAGAATACCCTGTTGATCTTTCTCTTCCAGACATCAAGAACAGTATCTATTCGACTGATGAATTCCGAATGTATTCGTTCAAGGTTCGACCCTGCTCACGGGCTTACTCTCATGATTGGACTGAGTGTCCCTTTGTCCACCCTGGAGAAAATGCTAGGAGGAGGGATCCAAGAAAGTTTCATTATAGCTGTGTACCCTGTCCCGATTTTCGGAAGGGTGCTTGCAGACGGGGAGATATGTGCGAATATGCTCATGGGGTGTTCGAGTGCTGGCTGCACCCAGCACAATATCGTACCCGGCTTTGCAAAGATGGCACGAATTGCTCAAGAAGAGTCTGCTTCTTTGCACACACGACTGAGGAACTGCGACCTCTGTATGTTTCGACTGGCTCTGCTGTTCCCTCACCGCGTTCTTGTACTTCTGGTATGGATTATAATACAGTCATGAACCTTCTACCTGGTTCTCCATCTTCGGTCCCGGTGATGTCTCCATCACTGTTCACCCCTCCGATGTCTCCCTCTGCAAATGGCATGTCTCACTCGTCCTTGGCTTGGCCCCAACCGAATGTACCTGCCTTGCATCTTCCAGGAAGCAATATTCAATCCAGCCGCCTAAGATCTTCTCTGAGTGCAAGAGACATTCCTGTAGAGGACTTTGATTATCTGAGTGATTTTGATATGCAACAACAGCAGCTCCTTAATGACTTGAATTGTCTTTCTCAGCCACCATTAAGTTCAAATTCATTGAGCCGTTCTGGTCGGATGAAAACTCTGACCCCTTCGAATCTCGACGATCTGTTCTCTGCTGAGAGTTCGTCTCCCAGATACTCTGATCAAGCTTTGGCTTCAGCTGTTTTCTCCCCTACACACAAATCAGCAGTGATCAATCAATTTCAGCAGCAACAGAATATGTTGTCACCAATCAATACAAATTTCTCTCCTAAAAATGTTGATCACCATCTATTGCAGGCCTCTTTTGGTGTTCCATCATCTGGGAGGATGTCTCCACGAAATATGGAACCCATCTCCCCGATGGGCTCTCGCTTGTCCATGTTAGCTCAAAGAGATAACTTTCAACAGTTTCGCAGCCTCAGCTCGCGTGAACTTGGTGCGAATTCTGCTTCTTTAGTTGGTTCCCCTGCAAGTTCTTGGTCTAAATGGGGACCTTCTAATGGAAGACCTGATTGGGCAGTCAATGCGGCGGATGAAATGGGTAAACTTCGGCGATCATCATCATTTGAGCTCGGGAACAATGGAGAAGAGCCAGATTTATCATGGGTTCAATCACTCGTGAAAGAATCTCCAACTGAGATAAAAGAAAAGCAGGCGCATCCCAATTCGGGTGGCGATAGTTTTGCATCTTCTGGTGAGAGTTCTAACATGAACTCCCAAATGGAGTCAGTCGATCATGCTGCATTGGGAGCATGGCTGGAACAAATGCAGCTCGATCATCTCGTCGCGCAACAGAACTGA | 2124 | 46.75 | MLLDSAMNNLTVETEDAFSSLLELAANDDIDAFKRSIERDPSGIDEIGLWYGRLRGSKQMTNEQRTPLMVAATYGSIEVLKLILSLSCADVNRVVGLDRSTALHCAASGGAANAVDIVKRLLAAGADPNVVDGNGHRPVDVIVAPLRHAELKSILTELLKTNGLSGEGNLDVLTGARNSYSPRPSSPLNAPSSASELVSSPTKSKLSDFPMYSASEKKEYPVDLSLPDIKNSIYSTDEFRMYSFKVRPCSRAYSHDWTECPFVHPGENARRRDPRKFHYSCVPCPDFRKGACRRGDMCEYAHGVFECWLHPAQYRTRLCKDGTNCSRRVCFFAHTTEELRPLYVSTGSAVPSPRSCTSGMDYNTVMNLLPGSPSSVPVMSPSLFTPPMSPSANGMSHSSLAWPQPNVPALHLPGSNIQSSRLRSSLSARDIPVEDFDYLSDFDMQQQQLLNDLNCLSQPPLSSNSLSRSGRMKTLTPSNLDDLFSAESSSPRYSDQALASAVFSPTHKSAVINQFQQQQNMLSPINTNFSPKNVDHHLLQASFGVPSSGRMSPRNMEPISPMGSRLSMLAQRDNFQQFRSLSSRELGANSASLVGSPASSWSKWGPSNGRPDWAVNAADEMGKLRRSSSFELGNNGEEPDLSWVQSLVKESPTEIKEKQAHPNSGGDSFASSGESSNMNSQMESVDHAALGAWLEQMQLDHLVAQQN | 707 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 5 | 8188247 | 8191660 | - | Hsped.05g05770.1 | Hepe05g0577 | 569842 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Hepe05g0577 | 707 | Gene3D | - | 278 | 341 | - | - | |
| Hepe05g0577 | 707 | ProSiteProfiles | Ankyrin repeat profile. | 98 | 133 | IPR002110 | GO:0005515(InterPro) | |
| Hepe05g0577 | 707 | SUPERFAMILY | Ankyrin repeat | 10 | 155 | IPR036770 | - | |
| Hepe05g0577 | 707 | SMART | c3hfinal6 | 278 | 304 | IPR000571 | GO:0046872(InterPro) | |
| Hepe05g0577 | 707 | SMART | c3hfinal6 | 313 | 336 | IPR000571 | GO:0046872(InterPro) | |
| Hepe05g0577 | 707 | FunFam | Zinc finger CCCH domain-containing protein 66 | 236 | 304 | - | - | |
| Hepe05g0577 | 707 | Gene3D | - | 14 | 163 | IPR036770 | - | |
| Hepe05g0577 | 707 | MobiDBLite | consensus disorder prediction | 175 | 205 | - | - | |
| Hepe05g0577 | 707 | MobiDBLite | consensus disorder prediction | 664 | 684 | - | - | |
| Hepe05g0577 | 707 | MobiDBLite | consensus disorder prediction | 595 | 614 | - | - | |
| Hepe05g0577 | 707 | ProSiteProfiles | Zinc finger C3H1-type profile. | 283 | 305 | IPR000571 | GO:0046872(InterPro) | |
| Hepe05g0577 | 707 | PANTHER | UNKEMPT FAMILY MEMBER | 57 | 652 | IPR045234 | - | |
| Hepe05g0577 | 707 | ProSiteProfiles | Ankyrin repeat region circular profile. | 98 | 132 | - | - | |
| Hepe05g0577 | 707 | Pfam | Ankyrin repeats (3 copies) | 60 | 132 | IPR002110 | GO:0005515(InterPro) | |
| Hepe05g0577 | 707 | MobiDBLite | consensus disorder prediction | 651 | 684 | - | - | |
| Hepe05g0577 | 707 | MobiDBLite | consensus disorder prediction | 455 | 474 | - | - | |
| Hepe05g0577 | 707 | Pfam | Zinc finger C-x8-C-x5-C-x3-H type (and similar) | 282 | 303 | IPR000571 | GO:0046872(InterPro) | |
| Hepe05g0577 | 707 | SMART | ANK_2a | 63 | 93 | IPR002110 | GO:0005515(InterPro) | |
| Hepe05g0577 | 707 | SMART | ANK_2a | 98 | 130 | IPR002110 | GO:0005515(InterPro) |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Hepe01g0712 | Hepe-Chr1:69671954 | Hepe05g0577 | Hepe-Chr5:8188247 | 1.17e-147 | dispersed | |
| Hepe02g1233 | Hepe-Chr2:15406189 | Hepe05g0577 | Hepe-Chr5:8188247 | 1.48e-294 | dispersed | |
| Hepe05g0577 | Hepe-Chr5:8188247 | Hepe09g0842 | Hepe-Chr9:8293413 | 3.24e-60 | dispersed | |
| Hepe05g0577 | Hepe-Chr5:8188247 | Hepe08g0724 | Hepe-Chr8:6521381 | 1.14e-157 | transposed |
Transcription factors information
| Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
|---|---|---|---|---|---|---|---|
| 55589 | PF12796 | Ank_2 | 4.00E-09 | CL0465 | Hepe | TF |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Hepe05g0577 | - | - | - | 0.0 |