Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Hepe05g0578 | ATGACCCACTTTCTCGAACCCAAATTCCATCAAACCCCATTTCCCCTTCTCCGCCGCACCACAAAATCTCCACCGCCCATTTCAATCCGATGCGGCAGCTCCGCCCGCGAGCTCCGATCCCGATTAGACTCCATCAAGAACACCCAAAAGCTCACCGAAGCCATGAAGCTCGTCGCTGCCGCCAAAGTCCGCCGAGCCCAAGAAGCGGTAATCAACAGCCGCCCCTTCTCTCAATCCCTCGCCAAATTTCTCCATTTCATTACCCAACAAATCCAACCAGACGACATAGATTTCCCCTTTCTAAACCCTAGACCCATCAAAAAAGTCGCCGTCGTCGTCTTCACCGGCGACCGAGGCCTCTGTGGGGGTTTCAACGCGTCGGTGATCAAAAAAGCCGAGACCCGATTGGCCGAATTGAAAAATCTCGATCTGGGTCACACCCTAATCAGCGTCGGCAAAAAGGGCAACTCGCATTTCCGCCGCCGCTCCGATGTTCAAGTCGACCGGTTCATCACCGGCTGCGGTGGCAGTTCATTACCCACTGCAAAAGAAGCCCAAGCCATTGCAGACATTGTGTTTTCTCTGTTCATCAGCGAAGAAGTGGACAAAGTGGAACTAATTTACACAAAGTTCGTTTCTTTGCTGAAATCTGAGCCTGTGATTGAGACTCTGCTGCCATTGTTGGGGAAAGAGGAAGCAATGGGAGATGGGGGGTTTAGATTGACGACAAAGGAAGGGAAATTGAAGGTGGAGAGAGAGGGGAAAATGATGGGGAATTTGGGGGAAATTTCGCCATTGTTGGAGTTTGAACAAGACCCAGTTCAGATTTTGGATGGGATGATGGCTCTGTATTTGAACAGCCAGATTTTGAGGGCTTTGCAGGAATCTTTGGCGAGTGAGGTCGCGGCGAGGATGAATGCCATGAGTAATGCTTCTGAGAATGCAATGGAGTTGAAGAAATCTATTTCGATTGCTTATAATCGAGAGAGACAGGCTAAGATTACAGGGGAGATTTTGGAGATTGTTGCTGGATCTGAGGCTCTTGAGAGATTTTGA | 1056 | 49.72 | MTHFLEPKFHQTPFPLLRRTTKSPPPISIRCGSSARELRSRLDSIKNTQKLTEAMKLVAAAKVRRAQEAVINSRPFSQSLAKFLHFITQQIQPDDIDFPFLNPRPIKKVAVVVFTGDRGLCGGFNASVIKKAETRLAELKNLDLGHTLISVGKKGNSHFRRRSDVQVDRFITGCGGSSLPTAKEAQAIADIVFSLFISEEVDKVELIYTKFVSLLKSEPVIETLLPLLGKEEAMGDGGFRLTTKEGKLKVEREGKMMGNLGEISPLLEFEQDPVQILDGMMALYLNSQILRALQESLASEVAARMNAMSNASENAMELKKSISIAYNRERQAKITGEILEIVAGSEALERF | 351 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
5 | 8209307 | 8210362 | + | Hsped.05g05780.1 | Hepe05g0578 | 569843 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Hepe05g0578 | 351 | Gene3D | - | 99 | 228 | - | - | |
Hepe05g0578 | 351 | PANTHER | ATP SYNTHASE GAMMA CHAIN | 20 | 348 | IPR000131 | GO:0000275(PANTHER)|GO:0009535(PANTHER)|GO:0015986(InterPro)|GO:0015986(PANTHER)|GO:0045261(InterPro)|GO:0046933(InterPro)|GO:0046933(PANTHER) | |
Hepe05g0578 | 351 | FunFam | ATP synthase gamma chain | 99 | 228 | - | - | |
Hepe05g0578 | 351 | NCBIfam | ATP synthase F1 subunit gamma | 34 | 348 | IPR000131 | GO:0015986(InterPro)|GO:0045261(InterPro)|GO:0046933(InterPro) | |
Hepe05g0578 | 351 | Hamap | ATP synthase gamma chain [atpG]. | 32 | 348 | IPR000131 | GO:0015986(InterPro)|GO:0045261(InterPro)|GO:0046933(InterPro) | |
Hepe05g0578 | 351 | CDD | F1-ATPase_gamma | 34 | 345 | IPR000131 | GO:0015986(InterPro)|GO:0045261(InterPro)|GO:0046933(InterPro) | |
Hepe05g0578 | 351 | FunFam | ATP synthase gamma chain, chloroplastic | 244 | 348 | - | - | |
Hepe05g0578 | 351 | PRINTS | ATP synthase gamma subunit signature | 295 | 314 | IPR000131 | GO:0015986(InterPro)|GO:0045261(InterPro)|GO:0046933(InterPro) | |
Hepe05g0578 | 351 | PRINTS | ATP synthase gamma subunit signature | 326 | 347 | IPR000131 | GO:0015986(InterPro)|GO:0045261(InterPro)|GO:0046933(InterPro) | |
Hepe05g0578 | 351 | PRINTS | ATP synthase gamma subunit signature | 202 | 219 | IPR000131 | GO:0015986(InterPro)|GO:0045261(InterPro)|GO:0046933(InterPro) | |
Hepe05g0578 | 351 | PRINTS | ATP synthase gamma subunit signature | 106 | 125 | IPR000131 | GO:0015986(InterPro)|GO:0045261(InterPro)|GO:0046933(InterPro) | |
Hepe05g0578 | 351 | Gene3D | ATP synthase, gamma subunit, helix hairpin domain | 33 | 98 | - | - | |
Hepe05g0578 | 351 | Gene3D | ATP synthase, gamma subunit, helix hairpin domain | 243 | 348 | - | - | |
Hepe05g0578 | 351 | SUPERFAMILY | ATP synthase (F1-ATPase), gamma subunit | 34 | 348 | IPR035968 | GO:0015986(InterPro)|GO:0045261(InterPro)|GO:0046933(InterPro) | |
Hepe05g0578 | 351 | Pfam | ATP synthase | 34 | 348 | IPR000131 | GO:0015986(InterPro)|GO:0045261(InterPro)|GO:0046933(InterPro) | |
Hepe05g0578 | 351 | FunFam | ATP synthase gamma chain, chloroplastic | 33 | 100 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Hepe05g0578 | Hepe-Chr5:8209307 | Hepe07g2036 | Hepe-Chr7:64556874 | 3.24e-125 | dispersed | |
Hepe05g0578 | Hepe-Chr5:8209307 | Hepe04g1768 | Hepe-Chr4:72617337 | 7.24e-129 | transposed |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Hepe05g0578 | K02115 | - | csv:101214682 | 599.356 |