Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Hepe05g0611 ATGATGAGTAATCACATCATGGAGATCTTACAGTCGCTTGATTCTCAGGTTCTCGCCGGTTTAGCAGCGGCCCTGGTTGCCATTGTTGCTGGTGCTGCTTTCCTCTTTTCCTCCAGAAAACCCACATCTAAAGCCTGCTTGGATCCTGAGAACTTTAAGGAGTTTAAGCTTATTAAGCGTACGAAGGTGAGCCATAATGTGGCGAAGTTCACTTTTATACTTCCCAAGCCTGATGCAATTCTTGGTCTTCCCATTGGACAACATATAAGTTGCAGGGGAAAGGATAGCCAAGGGGAAGAGGTTATTAAATCTTACACCCCAACTACTTTGGACTCTGATGTTGGATATTTTGAACTAGTCATAAAGATGTATCCCCAAGGAAGGATGTCACATCATTTTCGAGAAATGCGTATGGGGGAGCATCTTGCTGTGAAGGGACCAAAGGGACGTTTTAAGTATCAACCTGGTCAAGTTAGTGCATTTGGGATGCTTGCTGGAGGCTCTGGCATTACACCTATGTACCAAGTTTCTCGGGCTATATTAGAGAACCCGAACGACAAGACAAACATTCACCTTATTTACGCCAATGTTACAATTGAAGATATTCTTTTGAAGGAGGAATTGGATCTTCTTGCCAAACGATACCCTGATAGCTTCAAGATCTACTATGTGTTGAACCAGCCTCCTGAAGTTTGGGATGGTGGCGTTGGCTTTGTGTCCAAGGAAATGATTCAAGAGCATTTGCCTGCACCTGCTTCTGACATTCAGATTCTACGATGCGGTCCGCCGCCAATGAACAAGGCCATGGCTACACACCTTGATGCCCTTGGATATACACCTGAAATGCAGTTTCAATTCTAA 861 44.37 MMSNHIMEILQSLDSQVLAGLAAALVAIVAGAAFLFSSRKPTSKACLDPENFKEFKLIKRTKVSHNVAKFTFILPKPDAILGLPIGQHISCRGKDSQGEEVIKSYTPTTLDSDVGYFELVIKMYPQGRMSHHFREMRMGEHLAVKGPKGRFKYQPGQVSAFGMLAGGSGITPMYQVSRAILENPNDKTNIHLIYANVTIEDILLKEELDLLAKRYPDSFKIYYVLNQPPEVWDGGVGFVSKEMIQEHLPAPASDIQILRCGPPPMNKAMATHLDALGYTPEMQFQF 286
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 9390462 9395043 - Hsped.05g06110.1 Hepe05g0611 569876

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Hepe05g0611 286 Pfam Oxidoreductase FAD-binding domain 55 153 IPR008333 -
Hepe05g0611 286 SUPERFAMILY Ferredoxin reductase-like, C-terminal NADP-linked domain 142 282 IPR039261 -
Hepe05g0611 286 Pfam Oxidoreductase NAD-binding domain 163 269 IPR001433 GO:0016491(InterPro)
Hepe05g0611 286 FunFam NADH-cytochrome b5 reductase 45 144 - -
Hepe05g0611 286 CDD cyt_b5_reduct_like 55 286 - -
Hepe05g0611 286 FunFam NADH-cytochrome b5 reductase 144 286 - -
Hepe05g0611 286 SUPERFAMILY Riboflavin synthase domain-like 46 155 IPR017938 -
Hepe05g0611 286 ProSiteProfiles Ferredoxin reductase-type FAD binding domain profile. 50 154 IPR017927 GO:0016491(InterPro)
Hepe05g0611 286 PRINTS Cytochrome B5 reductase signature 81 92 - -
Hepe05g0611 286 PRINTS Cytochrome B5 reductase signature 200 211 - -
Hepe05g0611 286 PRINTS Cytochrome B5 reductase signature 256 264 - -
Hepe05g0611 286 PRINTS Cytochrome B5 reductase signature 139 153 - -
Hepe05g0611 286 PRINTS Cytochrome B5 reductase signature 162 181 - -
Hepe05g0611 286 PRINTS Cytochrome B5 reductase signature 103 110 - -
Hepe05g0611 286 Gene3D Translation factors 42 143 - -
Hepe05g0611 286 PANTHER NADH-CYTOCHROME B5 REDUCTASE 7 286 IPR001834 GO:0004128(PANTHER)|GO:0016491(InterPro)|GO:0022900(PANTHER)
Hepe05g0611 286 Gene3D - 144 286 IPR039261 -
Hepe05g0611 286 PRINTS Flavoprotein pyridine nucleotide cytochrome reductase signature 256 264 IPR001709 GO:0016491(InterPro)
Hepe05g0611 286 PRINTS Flavoprotein pyridine nucleotide cytochrome reductase signature 200 211 IPR001709 GO:0016491(InterPro)
Hepe05g0611 286 PRINTS Flavoprotein pyridine nucleotide cytochrome reductase signature 162 181 IPR001709 GO:0016491(InterPro)
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hepe05g0611 K00326 - - csv:101212931 500.36
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Hepe05g0611 Hepe-Chr5:9390462 Hepe08g2552 Hepe-Chr8:67128104 5.31e-60 dispersed
Hepe04g0560 Hepe-Chr4:58436128 Hepe05g0611 Hepe-Chr5:9390462 1.86e-164 wgd
       

Syn-Families

Select Gene Event_type S_start S_end Function Ath_gene Identity(%) E-value Score
Hepe06g0817 . 1 132 NADPH P450 reductases AT5G53560 77.6 4.1e-57 217.6
Hepe05g1755 . 1 133 NADPH P450 reductases AT5G53560 69.2 4.0e-52 201.1
Hepe03g0349 . 1 128 NADPH P450 reductases AT5G53560 69.5 2.4e-49 191.8
Hepe06g1849 . 4 131 NADPH P450 reductases AT5G53560 64.8 1.9e-46 182.2
Hepe05g1755 . 1 132 NADPH P450 reductases AT5G48810 64.9 8.1e-48 186.8
Hepe03g0349 . 1 128 NADPH P450 reductases AT5G48810 63.8 9.9e-46 179.9
Hepe06g1849 . 2 132 NADPH P450 reductases AT5G48810 62.4 2.2e-45 178.7
Hepe06g0817 . 1 132 NADPH P450 reductases AT5G48810 58.1 2.4e-44 175.3
Hepe05g1755 . 22 133 NADPH P450 reductases AT2G32720 83.9 1.7e-50 195.7
Hepe03g0349 . 22 128 NADPH P450 reductases AT2G32720 79.4 2.1e-45 178.7
Hepe06g1849 . 21 132 NADPH P450 reductases AT2G32720 71.4 1.1e-41 166.4
Hepe06g0817 . 22 131 NADPH P450 reductases AT2G32720 67.0 1.5e-38 156.0
Hepe10g0572 . 1 131 NADPH P450 reductases AT1G26340 57.0 1.1e-38 156.4
Hepe04g0560 . 2 281 NADPH P450 reductases AT5G17770 81.8 6.8e-131 463.8
Hepe05g0611 . 8 286 NADPH P450 reductases AT5G17770 77.8 2.3e-126 448.7
Hepe06g0817 . 1 132 NADPH P450 reductases AT5G53560 77.6 4.1e-57 217.6
Hepe05g1755 . 1 133 NADPH P450 reductases AT5G53560 69.2 4.0e-52 201.1
Hepe03g0349 . 1 128 NADPH P450 reductases AT5G53560 69.5 2.4e-49 191.8
Hepe06g1849 . 4 131 NADPH P450 reductases AT5G53560 64.8 1.9e-46 182.2
Hepe05g1755 . 1 132 NADPH P450 reductases AT5G48810 64.9 8.1e-48 186.8
Hepe03g0349 . 1 128 NADPH P450 reductases AT5G48810 63.8 9.9e-46 179.9
Hepe06g1849 . 2 132 NADPH P450 reductases AT5G48810 62.4 2.2e-45 178.7
Hepe06g0817 . 1 132 NADPH P450 reductases AT5G48810 58.1 2.4e-44 175.3
Hepe05g1755 . 22 133 NADPH P450 reductases AT2G32720 83.9 1.7e-50 195.7
Hepe03g0349 . 22 128 NADPH P450 reductases AT2G32720 79.4 2.1e-45 178.7
Hepe06g1849 . 21 132 NADPH P450 reductases AT2G32720 71.4 1.1e-41 166.4
Hepe06g0817 . 22 131 NADPH P450 reductases AT2G32720 67.0 1.5e-38 156.0
Hepe10g0572 . 1 131 NADPH P450 reductases AT1G26340 57.0 1.1e-38 156.4
Hepe04g0560 . 2 281 NADPH P450 reductases AT5G17770 81.8 6.8e-131 463.8
Hepe05g0611 . 8 286 NADPH P450 reductases AT5G17770 77.8 2.3e-126 448.7
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0000880 3 3 2 3 3 2 4 3 2 3 3 3 4 3 3 4 3 4 4 2 3 2 2 3 2 1 1 3 5 3 86