Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Hepe05g0611 ATGATGAGTAATCACATCATGGAGATCTTACAGTCGCTTGATTCTCAGGTTCTCGCCGGTTTAGCAGCGGCCCTGGTTGCCATTGTTGCTGGTGCTGCTTTCCTCTTTTCCTCCAGAAAACCCACATCTAAAGCCTGCTTGGATCCTGAGAACTTTAAGGAGTTTAAGCTTATTAAGCGTACGAAGGTGAGCCATAATGTGGCGAAGTTCACTTTTATACTTCCCAAGCCTGATGCAATTCTTGGTCTTCCCATTGGACAACATATAAGTTGCAGGGGAAAGGATAGCCAAGGGGAAGAGGTTATTAAATCTTACACCCCAACTACTTTGGACTCTGATGTTGGATATTTTGAACTAGTCATAAAGATGTATCCCCAAGGAAGGATGTCACATCATTTTCGAGAAATGCGTATGGGGGAGCATCTTGCTGTGAAGGGACCAAAGGGACGTTTTAAGTATCAACCTGGTCAAGTTAGTGCATTTGGGATGCTTGCTGGAGGCTCTGGCATTACACCTATGTACCAAGTTTCTCGGGCTATATTAGAGAACCCGAACGACAAGACAAACATTCACCTTATTTACGCCAATGTTACAATTGAAGATATTCTTTTGAAGGAGGAATTGGATCTTCTTGCCAAACGATACCCTGATAGCTTCAAGATCTACTATGTGTTGAACCAGCCTCCTGAAGTTTGGGATGGTGGCGTTGGCTTTGTGTCCAAGGAAATGATTCAAGAGCATTTGCCTGCACCTGCTTCTGACATTCAGATTCTACGATGCGGTCCGCCGCCAATGAACAAGGCCATGGCTACACACCTTGATGCCCTTGGATATACACCTGAAATGCAGTTTCAATTCTAA 861 44.37 MMSNHIMEILQSLDSQVLAGLAAALVAIVAGAAFLFSSRKPTSKACLDPENFKEFKLIKRTKVSHNVAKFTFILPKPDAILGLPIGQHISCRGKDSQGEEVIKSYTPTTLDSDVGYFELVIKMYPQGRMSHHFREMRMGEHLAVKGPKGRFKYQPGQVSAFGMLAGGSGITPMYQVSRAILENPNDKTNIHLIYANVTIEDILLKEELDLLAKRYPDSFKIYYVLNQPPEVWDGGVGFVSKEMIQEHLPAPASDIQILRCGPPPMNKAMATHLDALGYTPEMQFQF 286
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 9390462 9395043 - Hsped.05g06110.1 Hepe05g0611 569876
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Hepe05g0611 286 Pfam Oxidoreductase FAD-binding domain 55 153 IPR008333 -
Hepe05g0611 286 SUPERFAMILY Ferredoxin reductase-like, C-terminal NADP-linked domain 142 282 IPR039261 -
Hepe05g0611 286 Pfam Oxidoreductase NAD-binding domain 163 269 IPR001433 GO:0016491(InterPro)
Hepe05g0611 286 FunFam NADH-cytochrome b5 reductase 45 144 - -
Hepe05g0611 286 CDD cyt_b5_reduct_like 55 286 - -
Hepe05g0611 286 FunFam NADH-cytochrome b5 reductase 144 286 - -
Hepe05g0611 286 SUPERFAMILY Riboflavin synthase domain-like 46 155 IPR017938 -
Hepe05g0611 286 ProSiteProfiles Ferredoxin reductase-type FAD binding domain profile. 50 154 IPR017927 GO:0016491(InterPro)
Hepe05g0611 286 PRINTS Cytochrome B5 reductase signature 81 92 - -
Hepe05g0611 286 PRINTS Cytochrome B5 reductase signature 200 211 - -
Hepe05g0611 286 PRINTS Cytochrome B5 reductase signature 256 264 - -
Hepe05g0611 286 PRINTS Cytochrome B5 reductase signature 139 153 - -
Hepe05g0611 286 PRINTS Cytochrome B5 reductase signature 162 181 - -
Hepe05g0611 286 PRINTS Cytochrome B5 reductase signature 103 110 - -
Hepe05g0611 286 Gene3D Translation factors 42 143 - -
Hepe05g0611 286 PANTHER NADH-CYTOCHROME B5 REDUCTASE 7 286 IPR001834 GO:0004128(PANTHER)|GO:0016491(InterPro)|GO:0022900(PANTHER)
Hepe05g0611 286 Gene3D - 144 286 IPR039261 -
Hepe05g0611 286 PRINTS Flavoprotein pyridine nucleotide cytochrome reductase signature 256 264 IPR001709 GO:0016491(InterPro)
Hepe05g0611 286 PRINTS Flavoprotein pyridine nucleotide cytochrome reductase signature 200 211 IPR001709 GO:0016491(InterPro)
Hepe05g0611 286 PRINTS Flavoprotein pyridine nucleotide cytochrome reductase signature 162 181 IPR001709 GO:0016491(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Hepe05g0611 Hepe-Chr5:9390462 Hepe08g2552 Hepe-Chr8:67128104 5.31e-60 dispersed
Hepe04g0560 Hepe-Chr4:58436128 Hepe05g0611 Hepe-Chr5:9390462 1.86e-164 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hepe05g0611 K00326 - csv:101212931 500.36