Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Hepe05g0629 ATGGGAGGAAAGTGCCCTCACAGAAGCGTAAGTAAGCGGAGATACTCCCACAAGAAAGCTCGCCGTACGAAATTTCAAATCAAAGGCGATGATATGGTTTACGATGAGTTGAAGAAACCCGAGGTGGAGAGGCCTTCTCTTCCTGTTGACGAGGATTTGCCTGGAATGGGGCAGTACTATTGCTTCCACTGCGACCGATACTTTGCGAATGTGTCTGTGAGGGATGAGCATTTCAAGACCAAGCGTCACAGGAAGAAGGTAAAACTTATGGCTGGTCCTGCACCACATACACAACTGGACGCGGATTTAGCTGCTGGGATGGGCATGCCTGATAATGGTCCAAAGCTTATGGCAATGTGA 360 48.89 MGGKCPHRSVSKRRYSHKKARRTKFQIKGDDMVYDELKKPEVERPSLPVDEDLPGMGQYYCFHCDRYFANVSVRDEHFKTKRHRKKVKLMAGPAPHTQLDADLAAGMGMPDNGPKLMAM 119
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 9867102 9870945 - Hsped.05g06290.1 Hepe05g0629 569894
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Hepe05g0629 119 SUPERFAMILY beta-beta-alpha zinc fingers 47 110 IPR036236 -
Hepe05g0629 119 SMART ZnF_U1_5 56 90 IPR003604 GO:0003676(InterPro)|GO:0008270(InterPro)
Hepe05g0629 119 PANTHER EXPRESSED PROTEIN 1 119 - -
Hepe05g0629 119 MobiDBLite consensus disorder prediction 1 22 - -
Hepe05g0629 119 ProSitePatterns Zinc finger C2H2 type domain signature. 61 83 IPR013087 -
Hepe05g0629 119 Gene3D Classic Zinc Finger 45 109 - -
Hepe05g0629 119 Pfam Zinc-finger double-stranded RNA-binding 58 84 IPR022755 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Hepe04g0969 Hepe-Chr4:64075949 Hepe05g0629 Hepe-Chr5:9867102 1.55e-87 dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hepe05g0629 K14821 - csv:101222807 234.572