Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Hepe05g0644 ATGAAGGATGATGATTCAAATTGGTTCTCAAAATGGGAAGAACAGCTTCCTTCTCTTGATGAATTAATGCCTCTTTCTCAAACTCTAATCACTCCTGATCTTGCTTCCGCATTTGACATCACAAATCCAATTACTTCCATCAACAACAACCACTCACCGCCACCGCCACCGGTGGCTACAGCCGATTTTGGGGACTCCGGCGGCGACGAACCGGCGCGGACCCTGAAGCGGCCGCGCCTGGTGTGGACGCCACAGCTCCACAAGCGATTCGTGGACGCCGTCGCACATTTGGGGATAAAAAACGCCGTCCCTAAAACCATAATGCAGCTTATGAGCGTTGATGGGTTAACTCGTGAGAACGTAGCTAGCCATTTGCAGAAATACCGCCTCTATTTGAACCGTATGCAGGGGATTTCTGGTGGTAGCGGTGGTGGAGCTAGTGGCCGTGGCGCTGGATTGGCTTCTGTCGTTTCAGATCCCGCCACCGACCATTTGTTCGCCAGTTCCTCTCTTCCGCCGCATTTTCTTCACCATACTGCTGCTCGGGCTAATTCCGACCGTTTCTTGCCGTTTGTGCCCGTCGGAGCTCTGCAGCAGCACCACCACCACCACCAGATGGCCGCCGCCGCCGCTGCTCAGTACCACCACCGTCAAGTGGCCCATTTTGGGTCGCCGCCGAATGGACAATTTGAGCATCCGTTTTTGGTTCGGCCTGTTCACCGGATTGGGGCTCCGGTGAGTACTCCGGCGACGACTTACGACGATGATTTGGATTCCGGTAATGGAACAGGTGGGAGGAAGGTTCTTACTCTTTTCCCCACCGGAAATGATTGA 834 54.08 MKDDDSNWFSKWEEQLPSLDELMPLSQTLITPDLASAFDITNPITSINNNHSPPPPPVATADFGDSGGDEPARTLKRPRLVWTPQLHKRFVDAVAHLGIKNAVPKTIMQLMSVDGLTRENVASHLQKYRLYLNRMQGISGGSGGGASGRGAGLASVVSDPATDHLFASSSLPPHFLHHTAARANSDRFLPFVPVGALQQHHHHHQMAAAAAAQYHHRQVAHFGSPPNGQFEHPFLVRPVHRIGAPVSTPATTYDDDLDSGNGTGGRKVLTLFPTGND 277
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 10475095 10476153 - Hsped.05g06440.1 Hepe05g0644 569909
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Hepe05g0644 277 PANTHER HOMEODOMAIN-LIKE SUPERFAMILY PROTEIN-RELATED 4 222 IPR044841 GO:0003700(InterPro)|GO:0006355(InterPro)
Hepe05g0644 277 FunFam Two-component response regulator 73 136 - -
Hepe05g0644 277 Gene3D - 74 136 - -
Hepe05g0644 277 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 82 133 IPR017930 -
Hepe05g0644 277 MobiDBLite consensus disorder prediction 248 277 - -
Hepe05g0644 277 MobiDBLite consensus disorder prediction 46 72 - -
Hepe05g0644 277 NCBIfam myb-like DNA-binding domain, SHAQKYF class 78 130 IPR006447 GO:0003677(InterPro)
Hepe05g0644 277 Pfam Myb-like DNA-binding domain 80 129 IPR001005 -
Hepe05g0644 277 SUPERFAMILY Homeodomain-like 74 134 IPR009057 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Hepe05g0644 Hepe-Chr5:10475095 Hepe10g1262 Hepe-Chr10:48112377 2.93e-41 dispersed
Hepe04g0521 Hepe-Chr4:57695291 Hepe05g0644 Hepe-Chr5:10475095 1.34e-115 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
55597 PF00249 Myb_DNA-binding 1.90E-08 CL0123 Hepe TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hepe05g0644 - - - 0.0