Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Hepe05g0644 | ATGAAGGATGATGATTCAAATTGGTTCTCAAAATGGGAAGAACAGCTTCCTTCTCTTGATGAATTAATGCCTCTTTCTCAAACTCTAATCACTCCTGATCTTGCTTCCGCATTTGACATCACAAATCCAATTACTTCCATCAACAACAACCACTCACCGCCACCGCCACCGGTGGCTACAGCCGATTTTGGGGACTCCGGCGGCGACGAACCGGCGCGGACCCTGAAGCGGCCGCGCCTGGTGTGGACGCCACAGCTCCACAAGCGATTCGTGGACGCCGTCGCACATTTGGGGATAAAAAACGCCGTCCCTAAAACCATAATGCAGCTTATGAGCGTTGATGGGTTAACTCGTGAGAACGTAGCTAGCCATTTGCAGAAATACCGCCTCTATTTGAACCGTATGCAGGGGATTTCTGGTGGTAGCGGTGGTGGAGCTAGTGGCCGTGGCGCTGGATTGGCTTCTGTCGTTTCAGATCCCGCCACCGACCATTTGTTCGCCAGTTCCTCTCTTCCGCCGCATTTTCTTCACCATACTGCTGCTCGGGCTAATTCCGACCGTTTCTTGCCGTTTGTGCCCGTCGGAGCTCTGCAGCAGCACCACCACCACCACCAGATGGCCGCCGCCGCCGCTGCTCAGTACCACCACCGTCAAGTGGCCCATTTTGGGTCGCCGCCGAATGGACAATTTGAGCATCCGTTTTTGGTTCGGCCTGTTCACCGGATTGGGGCTCCGGTGAGTACTCCGGCGACGACTTACGACGATGATTTGGATTCCGGTAATGGAACAGGTGGGAGGAAGGTTCTTACTCTTTTCCCCACCGGAAATGATTGA | 834 | 54.08 | MKDDDSNWFSKWEEQLPSLDELMPLSQTLITPDLASAFDITNPITSINNNHSPPPPPVATADFGDSGGDEPARTLKRPRLVWTPQLHKRFVDAVAHLGIKNAVPKTIMQLMSVDGLTRENVASHLQKYRLYLNRMQGISGGSGGGASGRGAGLASVVSDPATDHLFASSSLPPHFLHHTAARANSDRFLPFVPVGALQQHHHHHQMAAAAAAQYHHRQVAHFGSPPNGQFEHPFLVRPVHRIGAPVSTPATTYDDDLDSGNGTGGRKVLTLFPTGND | 277 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
5 | 10475095 | 10476153 | - | Hsped.05g06440.1 | Hepe05g0644 | 569909 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Hepe05g0644 | 277 | PANTHER | HOMEODOMAIN-LIKE SUPERFAMILY PROTEIN-RELATED | 4 | 222 | IPR044841 | GO:0003700(InterPro)|GO:0006355(InterPro) | |
Hepe05g0644 | 277 | FunFam | Two-component response regulator | 73 | 136 | - | - | |
Hepe05g0644 | 277 | Gene3D | - | 74 | 136 | - | - | |
Hepe05g0644 | 277 | ProSiteProfiles | Myb-type HTH DNA-binding domain profile. | 82 | 133 | IPR017930 | - | |
Hepe05g0644 | 277 | MobiDBLite | consensus disorder prediction | 248 | 277 | - | - | |
Hepe05g0644 | 277 | MobiDBLite | consensus disorder prediction | 46 | 72 | - | - | |
Hepe05g0644 | 277 | NCBIfam | myb-like DNA-binding domain, SHAQKYF class | 78 | 130 | IPR006447 | GO:0003677(InterPro) | |
Hepe05g0644 | 277 | Pfam | Myb-like DNA-binding domain | 80 | 129 | IPR001005 | - | |
Hepe05g0644 | 277 | SUPERFAMILY | Homeodomain-like | 74 | 134 | IPR009057 | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Hepe05g0644 | Hepe-Chr5:10475095 | Hepe10g1262 | Hepe-Chr10:48112377 | 2.93e-41 | dispersed | |
Hepe04g0521 | Hepe-Chr4:57695291 | Hepe05g0644 | Hepe-Chr5:10475095 | 1.34e-115 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
55597 | PF00249 | Myb_DNA-binding | 1.90E-08 | CL0123 | Hepe | TF |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Hepe05g0644 | - | - | - | 0.0 |